Analysis

Name Programsort descending Source
Acyrthosiphon pisum JIC1 genome v1.0 Acyrthosiphon pisum JIC1 genome v1.0
Blast2GO on JIC1 annotation v1.0 Blast2GO BIPAA
Blast2GO on OGS3.0 Blast2GO BIPAA
Blast2GO: NCBI v2.1 Blast2GO annotation NCBI v2.1 BIPAA
Blast2GO: OGS v2.1b Blast2GO annotation v2.1b BIPAA
Blastp: NCBI 2.1 vs NR blastp annotation NCBI v2.1 BIPAA
Blastp: OGS v2.1b vs NR blastp annotation v2.1b BIPAA
Acyrthosiphon pisum JIC1 annotation v1.0 Braker
Diamond: OGS3.0 vs NR Diamond BIPAA
Diamond: on JIC1 annotation v1.0 vs NR Diamond BIPAA
NCBI v2.1 annotation of Acyrthosiphon pisum Gnomon A. pisum annotation NCBI v2.1
InterProScan on OGS3.0 InterProScan BIPAA
InterProScan on JIC1 annotation v1.0 InterProScan BIPAA
InterProScan: NCBI v2.1 InterProScan annotation NCBI v2.1 BIPAA
InterProScan: OGS v2.1b InterProScan annotation v2.1b BIPAA
RNASeq expression analysis PRJNA545527 nf-core/rnaseq BIPAA
Whole Genome Assembly (v2.0) of Acyrthosiphon pisum Performed by BIPAA BIPAA A. pisum assembly v2.0/v2.1b
OGS v2.1b of Acyrthosiphon pisum Performed by BIPAA BIPAA A. pisum annotation v2.1b
Acyrthosiphon pisum genome v3.0 Performed by The University of Texas at Austin The University of Texas at Austin
Acyrthosiphon pisum OGS3.0 Performed by The University of Texas at Austin The University of Texas at Austin