{"id":216,"date":"2015-11-16T17:02:27","date_gmt":"2015-11-16T17:02:27","guid":{"rendered":"http:\/\/bipaa.genouest.org\/is\/?page_id=216"},"modified":"2017-12-11T17:25:22","modified_gmt":"2017-12-11T17:25:22","slug":"downloads","status":"publish","type":"page","link":"https:\/\/bipaa.genouest.org\/is\/aphidbase\/myzus_persicae\/downloads\/","title":{"rendered":"Downloads"},"content":{"rendered":"<p>The following files are available for download :<\/p>\n<ul>\n<li>Clone G006 (<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/README.txt\">more information about these files<\/a>)\n<ul>\n<li style=\"list-style-type: none\">\n<ul>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/G006b_filled.fa.bz2\">Myzus persicae clone G006 genome assembly <\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Myzus_persicae_G006_buchnera_aphidicola_genome.fa\">Myzus persicae clone G006 buchnera aphidicola assembly<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/G006_assembly.pdf\">Technical report of the G006 assembly protocol<\/a><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<ul>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/Myzus_persicae_Clone_G006b_scaffolds.gff.gz\"> Myzus persicae clone G006 v1.0 GFF3 file (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/Myzus_persicae_Clone_G006b_scaffolds.gff.cDNA.fa.gz\"> Myzus persicae clone G006 v1.0 cDNA fasta file (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/Myzus_persicae_Clone_G006b_scaffolds.gff.cds.fa.gz\"> Myzus persicae clone G006 v1.0 CDS fasta file (processed by TGAC) <\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/Myzus_persicae_Clone_G006b_scaffolds.gff.pep.fa.gz\"> Myzus persicae clone G006 v1.0 peptide fasta file (processed by TGAC) <\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneG006\/Myzus_persicae_Clone_G006b_scaffolds.gff.functional_annotation.tsv.gz\"> Myzus persicae clone G006 v1.0 TGAC functional annotation file (processed by TGAC)<\/a><\/li>\n<li>RNA-Seq data\n<ul>\n<li>Whole insect (<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344877-01_S_5_1.txt.gz\">R1<\/a>,<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344877-01_S_5_2.txt.gz\">R2<\/a>)<\/li>\n<li>Gut (<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344876-01_S_4_1.txt.gz\">R1<\/a>, <a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344876-01_S_4_2.txt.gz\">R2<\/a>)<\/li>\n<li>Bacteriocyte (<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344875-01_S_3_1.txt.gz\">R1<\/a>,<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/RNASeq\/G006\/aWilson_G006RNAseq_201344875-01_S_3_2.txt.gz\">R2<\/a>)<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<\/li>\n<li>Clone O (<a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/README.txt\">more information about these files<\/a>)\n<ul>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.fa.gz\"> Myzus persicae TGAC clone O v1.1 scaffolds (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.gff.gz\"> Myzus persicae TGAC clone O v1.1 GFF3 file (processed by TGAC) <\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.gff.cDNA.fa.gz\"> Myzus persicae TGAC clone O v1.1 cDNA fasta file (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.gff.cds.fa.gz\">Myzus persicae TGAC clone O v1.1 CDS fasta file (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.gff.pep.fa.gz\">Myzus persicae TGAC clone O v1.1 peptide fasta file (processed by TGAC)<\/a><\/li>\n<li><a href=\"http:\/\/bipaa.genouest.org\/data\/group\/myzus\/Annotation\/Myzus_persicae_cloneO\/Myzus_persicae_Clone_O_TGAC_V1.1_scaffolds.gff.functional_annotation.tsv.gz\"> Myzus persicae TGAC clone O v1.1 functional annotation file (processed by TGAC)<\/a><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>The following files are available for download : Clone G006 (more information about these files) Myzus persicae clone G006 genome assembly Myzus persicae clone G006 buchnera aphidicola assembly Technical report of the G006 assembly protocol Myzus persicae clone G006 v1.0 GFF3 file (processed by TGAC) Myzus persicae clone G006 v1.0 cDNA fasta file (processed by &hellip; <a href=\"https:\/\/bipaa.genouest.org\/is\/aphidbase\/myzus_persicae\/downloads\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Downloads<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":211,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-216","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/216","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/comments?post=216"}],"version-history":[{"count":4,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/216\/revisions"}],"predecessor-version":[{"id":661,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/216\/revisions\/661"}],"up":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/211"}],"wp:attachment":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/media?parent=216"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}