{"id":276,"date":"2015-12-07T09:31:43","date_gmt":"2015-12-07T09:31:43","guid":{"rendered":"http:\/\/bipaa.genouest.org\/is\/?page_id=276"},"modified":"2016-02-22T10:23:15","modified_gmt":"2016-02-22T10:23:15","slug":"targets","status":"publish","type":"page","link":"https:\/\/bipaa.genouest.org\/is\/lepidodb\/bac-sequences\/targets\/","title":{"rendered":"BAC targets"},"content":{"rendered":"\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
List of targets used to identify the Spodoptera frugiperda and Helicoverpa armigera BACs sequenced as part of this study and the corresponding Bombyx scaffolds.<\/caption>\n
Target<\/th>\nH. armigera BAC<\/th>\nS.frugiperda BAC<\/th>\nB. mori scaffold<\/th>\n<\/tr>\n
apn1<\/td>\n11C07<\/a> ; Ha_APN_contig<\/a><\/td>\n41F05<\/a><\/td>\nnscaf2889_860001-1060000<\/a><\/td>\n<\/tr>\n
apn2<\/td>\n64G08<\/a><\/td>\n21C22<\/a><\/td>\n<\/td>\n<\/tr>\n
apn3<\/td>\n80K05<\/a> ; Ha_APN_contig<\/a><\/td>\n<\/td>\n<\/td>\n<\/tr>\n
apn4<\/td>\n31C13<\/a> ; Ha_APN_contig<\/a><\/td>\n<\/td>\n<\/td>\n<\/tr>\n
cyp9<\/td>\n02A22<\/a><\/td>\n10N12<\/a><\/td>\nnscaf2766_300001_500000<\/a><\/td>\n<\/tr>\n
cyp332A1<\/td>\n35D18<\/a><\/td>\n87A24<\/a><\/td>\nnscaf2888_3150001-3350000<\/a><\/td>\n<\/tr>\n
cyp4L<\/td>\n92N13<\/a><\/td>\n41I04<\/a><\/td>\nnscaf1898_13150001-13350000<\/a><\/td>\n<\/tr>\n
cyp4M<\/td>\n33M07<\/a><\/td>\n67K19<\/a>;78G03<\/a><\/td>\nnscaf2674_4000000-4200000<\/a><\/td>\n<\/tr>\n
cyp6B<\/td>\n12E11<\/a><\/td>\n83A13<\/a><\/td>\nnscaf2136_5100001-5300000<\/a><\/td>\n<\/tr>\n
ace1<\/td>\n41B01<\/a><\/td>\n70A06<\/a><\/td>\nnscaf2655_2400001-2600000<\/a><\/td>\n<\/tr>\n
pgi<\/td>\n23L11<\/a><\/td>\n49G12<\/a><\/td>\nnscaf2780_1-200000<\/a><\/td>\n<\/tr>\n
tbp\/cenp-b<\/td>\n94B11<\/a><\/td>\n72F01<\/a><\/td>\nnscaf2998_900001-1100000<\/a><\/td>\n<\/tr>\n
usp<\/td>\n26P10<\/a><\/td>\n22I20<\/a><\/td>\nnscaf2847_6350001-6550000<\/a><\/td>\n<\/tr>\n
ecR<\/td>\n11C15<\/a><\/td>\n15B14<\/a><\/td>\nnscaf2855_5900001-6100000<\/a><\/td>\n<\/tr>\n
or2<\/td>\n41P10<\/a><\/td>\n83A24<\/a><\/td>\nnscaf3058_4650001-4850000<\/a><\/td>\n<\/tr>\n
jhamt<\/td>\n25P08<\/a><\/td>\n33G08<\/a><\/td>\nnscaf2993_6100001-6300000<\/a><\/td>\n<\/tr>\n
rpL5<\/td>\n64D15<\/a><\/td>\n82A05<\/a><\/td>\nnscaf2888_4350001-4550000<\/a><\/td>\n<\/tr>\n
rpp1, rpL10A<\/td>\n43E14<\/a><\/td>\n60F14<\/a><\/td>\nnscaf2655_1400001-1600000<\/a><\/td>\n<\/tr>\n
11-tox<\/td>\n51D19<\/a><\/td>\n14E14<\/a>
\n33K20<\/a><\/td>\n		nscaf1898JM<\/a><\/td>\n<\/tr>\n
rps26, tfIId<\/td>\n30H06 *
46F15 *<\/td>\n		20M05<\/a><\/td>\nnscaf2883_1150001-1350000<\/a><\/td>\n<\/tr>\n
trypsin<\/td>\n40A04 *<\/td>\n51E05<\/a><\/td>\nnscaf2674_1600001-1800000<\/a><\/td>\n<\/tr>\n
fabp1<\/td>\n90N07 *<\/td>\n21I19<\/a><\/td>\nnscaf3058_1100001-1340000<\/a><\/td>\n<\/tr>\n
tpi<\/td>\n64A05 *<\/td>\n28P14<\/a><\/td>\nnscaf1690_3300001<\/a><\/td>\n<\/tr>\n
18wheeler<\/td>\n73I10 *<\/td>\n65A13<\/a><\/td>\n<\/td>\n<\/tr>\n
ppo2<\/td>\n15L07 *<\/td>\n34G16<\/a><\/td>\nnscaf3062_350001-550000<\/a><\/td>\n<\/tr>\n
cyp6ae<\/td>\n22B17 *<\/td>\n20L07<\/a><\/td>\nnscaf3063_1540001-1740000<\/a><\/td>\n<\/tr>\n
protein kinase cg8057,
putative dscam<\/td>\n		60D06 *<\/td>\n74P15<\/a><\/td>\nnscaf2993_7830001-8030000<\/a><\/td>\n<\/tr>\n
mapk<\/td>\n07H22 *<\/td>\n83D20<\/a><\/td>\nnscaf2674_1900001-2050000<\/a><\/td>\n<\/tr>\n
troponin<\/td>\n03I12 *<\/td>\n59C20<\/a><\/td>\nnscaf1898_4300001-4500000<\/a><\/td>\n<\/tr>\n
trypsin<\/td>\n02N14 *<\/td>\n72B06<\/a><\/td>\nnscaf2993_7960001-8200000<\/a><\/td>\n<\/tr>\n
hnrnpq, novel,
ga12400_pa<\/td>\n		05A03 *<\/td>\n52C06<\/a><\/td>\nnscaf2852_2150001-2350001<\/a><\/td>\n<\/tr>\n
hr96<\/td>\n36P04 *<\/td>\n14A01<\/a>
15B23<\/a><\/td>\n		<\/td>\n<\/tr>\n
vacuolar atpase<\/td>\n<\/td>\n84K04<\/a><\/td>\n<\/td>\n<\/tr>\n
spodoptericin, ddc,
chitine synthase<\/td>\n		<\/td>\n74M02<\/a><\/td>\nnscaf2589_600001-6200000<\/a><\/td>\n<\/tr>\n
abc transporter
(cg7955)<\/td>\n		<\/td>\n66E15<\/a><\/td>\nnscaf3056_400001<\/a><\/td>\n<\/tr>\n
octr,
glucose dehydrogenase<\/td>\n		<\/td>\n36K19<\/a><\/td>\nnscaf3015_700001<\/a><\/td>\n<\/tr>\n
cg8557<\/td>\n<\/td>\n96D18<\/a><\/td>\nnscaf2828_2450001<\/a><\/td>\n<\/tr>\n
chitin deacetylase,
wingless<\/td>\n		<\/td>\n75E05<\/a><\/td>\ndifficult to identify Bm counterpart<\/td>\n<\/tr>\n
ef1a<\/td>\n<\/td>\n72H13<\/a><\/td>\nnscaf2674_515001-715000<\/a><\/td>\n<\/tr>\n
unknown<\/td>\n<\/td>\n68E14<\/a><\/td>\nnscaf2556_250001-450000<\/a><\/td>\n<\/tr>\n
gst<\/td>\n32P23 *
28E03 *
72M04 *<\/td>\n		<\/td>\nnscaf2279_100001<\/a>
nscaf2931_1380001-1580000<\/a>
(weakly similar to nscaf2931_1380001-1580000<\/a>)<\/td>\n<\/tr>\n
glucose oxydase<\/td>\n43B16 *<\/td>\n<\/td>\n(weakly similar to nscaf1108_2600001-2800000<\/a>)<\/td>\n<\/tr>\n
p450, cyp321a<\/td>\n69C08 *<\/td>\n<\/td>\nnscaf3045_2050001<\/a><\/td>\n<\/tr>\n
cg16976<\/td>\n25D04 *<\/td>\n<\/td>\nnscaf3031_140001<\/a><\/td>\n<\/tr>\n
conserved novel protein<\/td>\n04F16 *<\/td>\n<\/td>\nnscaf2910_1-200000<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

* : access to these BAC is restricted<\/p>\n","protected":false},"excerpt":{"rendered":"

List of targets used to identify the Spodoptera frugiperda and Helicoverpa armigera BACs sequenced as part of this study and the corresponding Bombyx scaffolds. Target H. armigera BAC S.frugiperda BAC B. mori scaffold apn1 11C07 ; Ha_APN_contig 41F05 nscaf2889_860001-1060000 apn2 64G08 21C22 apn3 80K05 ; Ha_APN_contig apn4 31C13 ; Ha_APN_contig cyp9 02A22 10N12 nscaf2766_300001_500000 cyp332A1 … Continue reading BAC targets<\/span> →<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":271,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-276","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/276","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/comments?post=276"}],"version-history":[{"count":12,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/276\/revisions"}],"predecessor-version":[{"id":399,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/276\/revisions\/399"}],"up":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/271"}],"wp:attachment":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/media?parent=276"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}