{"id":76,"date":"2015-10-02T12:50:14","date_gmt":"2015-10-02T12:50:14","guid":{"rendered":"http:\/\/bipaa.genouest.org\/bipaaweb\/?page_id=76"},"modified":"2024-08-12T12:33:48","modified_gmt":"2024-08-12T12:33:48","slug":"lepidodb","status":"publish","type":"page","link":"https:\/\/bipaa.genouest.org\/is\/lepidodb\/","title":{"rendered":"LepidoDB"},"content":{"rendered":"<p>LepidoDB is a centralized bioinformatic resource that was first developed to facilitate the comparative genomics of two major lepidopteran pests, the noctuid moths Helicoverpa armigera and Spodoptera frugiperda, by the analyzis of syntenic relationships and genome rearrangements of 15 couple of BACs sequences and their corresponding colinear regions extracted from 10 Bombyx mori chromosomes. These resources are still available on the <a href=\"https:\/\/bipaa.genouest.org\/is\/lepidodb\/bac-sequences\/\">BAC section of LepidoBD<\/a>.<\/p>\n<p>LepidoDB have been extended to provide genomic resources for the following organisms for which full genomic sequences are now available:<\/p>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2023\/12\/coenonympha_arcania.png\" alt=\"Coenonympha arcania\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/coenonympha_arcania\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Coenonympha arcania<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2024\/07\/Coenonympha_cephalidarwiniana.jpg\" alt=\"Coenonympha cephalidarwiniana\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/coenonympha_cephalidarwiniana\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Coenonympha cephalidarwiniana<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2024\/07\/Coenonympha_darwiniana.jpg\" alt=\"Coenonympha darwiniana\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/coenonympha_darwiniana\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Coenonympha darwiniana<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2024\/07\/Coenonympha_gardetta.jpg\" alt=\"Coenonympha gardetta\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/coenonympha_gardetta\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Coenonympha gardetta<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2024\/05\/hylesia_metabus.jpg\" alt=\"Hylesia_metabus. Author: Charles Perrier\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/hylesia_metabus\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Hylesia metabus<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2020\/04\/Ithomia_salapia.png\" alt=\"Ithomia salapia\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/ithomia_salapia\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Ithomia salapia<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2021\/04\/species.jpg\" alt=\"Melinaea marsaeus\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/melinaea_marsaeus\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Melinaea marsaeus<\/div>\n<div class=\"tagline overtext\"><\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2023\/01\/ostrinia_furnacalis.png\" alt=\"Ostrinia furnacalis\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/ostrinia_furnacalis\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Ostrinia furnacalis<\/div>\n<div class=\"tagline overtext\">Asian corn borer<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2023\/01\/ostrinia_nubilalis.png\" alt=\"Ostrinia nubilalis\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/ostrinia_nubilalis\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Ostrinia nubilalis<\/div>\n<div class=\"tagline overtext\">European corn borer<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2017\/07\/ostrinia_nubilalis.png\" alt=\"Ostrinia scapulalis\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/ostrinia_scapulalis\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Ostrinia scapulalis<\/div>\n<div class=\"tagline overtext\">Adzuki bean borer<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2021\/04\/sesamia_nonagrioides.jpg\" alt=\"Sesamia nonagrioides\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/sesamia_nonagrioides\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Sesamia nonagrioides<\/div>\n<div class=\"tagline overtext\"> <\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/10\/Spodoptera_frugiperda_worm-e1444144444804.jpg\" alt=\"Spodoptera frugiperda\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/spodoptera_frugiperda_corn\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Spodoptera frugiperda (corn)<\/div>\n<div class=\"tagline overtext\">Corn variant genome<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/10\/Spodoptera_frugiperda_worm-e1444144444804.jpg\" alt=\"Spodoptera frugiperda\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/spodoptera_frugiperda_rice\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Spodoptera frugiperda (rice)<\/div>\n<div class=\"tagline overtext\">Rice variant genome<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2018\/01\/Spodoptera_littoralis.png\" alt=\"Spodoptera littoralis\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/spodoptera_littoralis\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Spodoptera littoralis<\/div>\n<div class=\"tagline overtext\"> <\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2018\/01\/Spodoptera_litura_female.png\" alt=\"Spodoptera litura\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/spodoptera_litura\/\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">\ud83d\udd12 Spodoptera litura<\/div>\n<div class=\"tagline overtext\">The tobacco cutworm<\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/10\/Thaumetopoea_pityocampa_larva-e1444138900710.jpg\" alt=\"Thaumetopoea pityocampa\" width=\"200\" height=\"150\" \/><br \/>\n<a href=\"https:\/\/bipaa.genouest.org\/sp\/thaumetopoea_pityocampa\"><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">Thaumetopoea pityocampa<\/div>\n<div class=\"tagline overtext\"> <\/div>\n<\/div>\n<p><\/a>\n<\/div>\n<h3>Useful links:<\/h3>\n<ul>\n<li><a href=\"http:\/\/bioweb.ensam.inra.fr\/spodobase\">Spodobase<\/a><\/li>\n<li><a href=\"http:\/\/butterflybase.ice.mpg.de\/\">ButterflyBase<\/a><\/li>\n<li><a href=\"http:\/\/silkworm.genomics.org.cn\/\">SilkDB<\/a><\/li>\n<li><a href=\"http:\/\/insectacentral.ex.ac.uk\/\">InsectaCentral<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>LepidoDB is a centralized bioinformatic resource that was first developed to facilitate the comparative genomics of two major lepidopteran pests, the noctuid moths Helicoverpa armigera and Spodoptera frugiperda, by the analyzis of syntenic relationships and genome rearrangements of 15 couple of BACs sequences and their corresponding colinear regions extracted from 10 Bombyx mori chromosomes. These &hellip; <a href=\"https:\/\/bipaa.genouest.org\/is\/lepidodb\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">LepidoDB<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-76","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/76","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/comments?post=76"}],"version-history":[{"count":40,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/76\/revisions"}],"predecessor-version":[{"id":975,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/76\/revisions\/975"}],"wp:attachment":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/media?parent=76"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}