{"id":87,"date":"2015-10-06T08:36:22","date_gmt":"2015-10-06T08:36:22","guid":{"rendered":"http:\/\/bipaa.genouest.org\/bipaaweb\/?page_id=87"},"modified":"2026-02-26T17:35:07","modified_gmt":"2026-02-26T17:35:07","slug":"bipaa","status":"publish","type":"page","link":"https:\/\/bipaa.genouest.org\/is\/","title":{"rendered":"BIPAA"},"content":{"rendered":"<h2 class=\" text-JUSTIFY\">BioInformatics Platform for Agroecosystem Arthropods<\/h2>\n<p>At BIPAA we provide genomic resources for multiple insect (and arthropod) species:<\/p>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-25\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/09\/Acyrthosiphon-pisum_medium-e1444138271197.jpg\" alt=\"AphidBase\" width=\"200\" height=\"150\" \/><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">AphidBase<\/div>\n<div class=\"tagline overtext\">Genomic resources for aphids<\/div>\n<\/div>\n<p>&nbsp;<\/p>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-26\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/12\/aphidius_ervi-e1449483613143.jpg\" alt=\"ParWaspDB\" width=\"200\" height=\"150\" \/><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">ParWaspDB<\/div>\n<div class=\"tagline overtext\">Genomic resources for parasito\u00efd wasps<\/div>\n<\/div>\n<p>&nbsp;<\/p>\n<\/div>\n<div class=\"box\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/10\/Spodoptera_frugiperda_worm-e1444144444804.jpg\" alt=\"LepidoDB\" width=\"200\" height=\"150\" \/><\/p>\n<div class=\"overbox\">\n<div class=\"title overtext\">LepidoDB<\/div>\n<div class=\"tagline overtext\">Genomic resources for lepidopterans<\/div>\n<\/div>\n<p>&nbsp;<\/p>\n<\/div>\n<p>Also check out resources for <a href=\"https:\/\/bipaa.genouest.org\/is\/coleoptera\/\">Coleoptera<\/a>, <a href=\"https:\/\/bipaa.genouest.org\/is\/crustacea\/\">Crustacea<\/a> <a href=\"https:\/\/bipaa.genouest.org\/is\/ticks\/\">, Ticks<\/a> and Diptera<\/p>\n<p>We contribute to <a href=\"https:\/\/usegalaxy.fr\">UseGalaxy.fr<\/a>, the French national Galaxy server. Feel free to use it (or other UseGalaxy.* servers) to analyze your data:<\/p>\n<div><a href=\"https:\/\/usegalaxy.fr\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-418 size-full\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2015\/10\/galaxy_logo_25percent_transparent.png\" alt=\"French Galaxy server\" width=\"292\" height=\"75\" \/><\/a><\/div>\n<p>Access to some of these resources is restricted. To create an account, use the <a href=\"https:\/\/bipaa.genouest.org\/account\/\">BIPAA registration form<\/a>.<\/p>\n<p>Follow us on <a href=\"https:\/\/twitter.com\/bipaa_inrae\">Twitter<\/a> for latest news<\/p>\n<h3 class=\" text-JUSTIFY\">About BIPAA<\/h3>\n<p class=\" text-JUSTIFY\">BIPAA is a central platform to assist genomics and post-genomics programs developed on insects associated to agroecosystem, for the Plant Health and Environment Division of <a href=\"http:\/\/www.inra.fr\" target=\"_self\" rel=\"noopener noreferrer\">INRAE<\/a>. We provide online access to genomic data for multiple arthropod species. We also aim to settle an environment allowing a large community to elaborate complex genomics analyses, browsing, mixing or crossing heterogeneous data. We shares resources and use standards guaranteeing data integration and interoperability, and we improve the coherence of the protocols set up by its various partners.<\/p>\n<p class=\" text-JUSTIFY\">BIPAA works with different INRAE labs, and is mainly associated with national networks settled on aphids, lepidopteran and their associated parasitoids and predators. It is also involved in international projects on insect genome sequencing such as <a href=\"http:\/\/www.arthropodgenomes.org\/wiki\/i5K\" target=\"_self\" rel=\"noopener noreferrer\">i5K<\/a>.<\/p>\n<p class=\" text-JUSTIFY\">The platform aims at developing particular treatments on a large panel of \u201comics\u201d (e.g. genomics, transcriptomics, epigenomics, methylomics or proteogenomics) in strong collaboration with the <a href=\"https:\/\/team.inria.fr\/genscale\/\" target=\"_self\" rel=\"noopener noreferrer\">GenScale<\/a> team headed by Pierre Peterlongo, and <a href=\"http:\/\/www.irisa.fr\/dyliss\/\">Dyliss<\/a> team headed by Olivier Dameron, both in INRIA\/Irisa center in Rennes, France.<\/p>\n<p class=\" text-JUSTIFY\">The team is part of the <a href=\"http:\/\/www.genouest.org\">Genouest<\/a> platform, an <a href=\"http:\/\/www.ibisa.net\" target=\"_self\" rel=\"noopener noreferrer\">IBISA<\/a> platform, member of <a href=\"http:\/\/www.france-bioinformatique.fr\">IFB<\/a> (French institute of bioinformatics) headed by Anthony Bretaudeau at INRIA\/Irisa center in Rennes.<\/p>\n<p class=\" text-JUSTIFY\">Collaborative programs with BIPAA are driven by the two French networks BAPOA and <a href=\"https:\/\/www6.inrae.fr\/adalep\" target=\"_self\" rel=\"noopener noreferrer\">ADALEP<\/a>.<\/p>\n<p><a><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-25\" src=\"https:\/\/bipaa.genouest.org\/is\/wp-content\/uploads\/2019\/11\/bretagne.png\" alt=\"R\u00e9gion Bretagne\" width=\"50\" height=\"50\" \/><\/a> BIPAA genomic resources were funded by <a href=\"https:\/\/www.bretagne.bzh\/\">R\u00e9gion Bretagne<\/a>\/<a href=\"https:\/\/www.biogenouest.org\/\">Biogenouest<\/a> (Genodock project 2018\/2019)<\/p>\n","protected":false},"excerpt":{"rendered":"<p>BioInformatics Platform for Agroecosystem Arthropods At BIPAA we provide genomic resources for multiple insect (and arthropod) species: AphidBase Genomic resources for aphids &nbsp; ParWaspDB Genomic resources for parasito\u00efd wasps &nbsp; LepidoDB Genomic resources for lepidopterans &nbsp; Also check out resources for Coleoptera, Crustacea , Ticks and Diptera We contribute to UseGalaxy.fr, the French national Galaxy &hellip; <a href=\"https:\/\/bipaa.genouest.org\/is\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">BIPAA<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-87","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/87","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/comments?post=87"}],"version-history":[{"count":24,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/87\/revisions"}],"predecessor-version":[{"id":1092,"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/pages\/87\/revisions\/1092"}],"wp:attachment":[{"href":"https:\/\/bipaa.genouest.org\/is\/wp-json\/wp\/v2\/media?parent=87"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}