Analysis

Name Programsort ascending Source
Acyrthosiphon pisum OGS3.0 Performed by The University of Texas at Austin The University of Texas at Austin
Acyrthosiphon pisum genome v3.0 Performed by The University of Texas at Austin The University of Texas at Austin
OGS v2.1b of Acyrthosiphon pisum Performed by BIPAA BIPAA A. pisum annotation v2.1b
Whole Genome Assembly (v2.0) of Acyrthosiphon pisum Performed by BIPAA BIPAA A. pisum assembly v2.0/v2.1b
RNASeq expression analysis PRJNA545527 nf-core/rnaseq BIPAA
InterProScan: OGS v2.1b InterProScan annotation v2.1b BIPAA
InterProScan: NCBI v2.1 InterProScan annotation NCBI v2.1 BIPAA
InterProScan on JIC1 annotation v1.0 InterProScan BIPAA
InterProScan on OGS3.0 InterProScan BIPAA
NCBI v2.1 annotation of Acyrthosiphon pisum Gnomon A. pisum annotation NCBI v2.1
Diamond: on JIC1 annotation v1.0 vs NR Diamond BIPAA
Diamond: OGS3.0 vs NR Diamond BIPAA
Acyrthosiphon pisum JIC1 annotation v1.0 Braker
Blastp: OGS v2.1b vs NR blastp annotation v2.1b BIPAA
Blastp: NCBI 2.1 vs NR blastp annotation NCBI v2.1 BIPAA
Blast2GO: OGS v2.1b Blast2GO annotation v2.1b BIPAA
Blast2GO: NCBI v2.1 Blast2GO annotation NCBI v2.1 BIPAA
Blast2GO on OGS3.0 Blast2GO BIPAA
Blast2GO on JIC1 annotation v1.0 Blast2GO BIPAA
Acyrthosiphon pisum JIC1 genome v1.0 Acyrthosiphon pisum JIC1 genome v1.0