rna3866 (mRNA) Diuraphis noxia

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	XM_015507835.1
Unique Name	rna3866
Type	mRNA
Organism	Diuraphis noxia (Russian wheat aphid)

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
JOTR01000070	contig	JOTR01000070:676788..688373 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diuraphis noxia NCBI Gnomon annotation (20160302)	2016-03-02

Properties


Property Name	Value
Gbkey	mRNA
Gene	LOC107161429
Model evidence	Supporting evidence includes similarity to: 13 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
Product	uncharacterized LOC107161429
Transcript id	XM_015507835.1

Cross References

External references for this mRNA


Database	Accession
GeneID	107161429
Genbank	XM_015507835.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
LOC107161429	gene2629	Diuraphis noxia	gene	JOTR01000070 676788..688373 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
XM_015507835.1	rna3866	Diuraphis noxia	polypeptide	JOTR01000070 676788..688059 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
id33713	id33713	Diuraphis noxia	exon	JOTR01000070 676788..676914 +
id33714	id33714	Diuraphis noxia	exon	JOTR01000070 677056..677286 +
id33715	id33715	Diuraphis noxia	exon	JOTR01000070 677430..677862 +
id33716	id33716	Diuraphis noxia	exon	JOTR01000070 682387..682541 +
id33717	id33717	Diuraphis noxia	exon	JOTR01000070 686618..688373 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
XP_015363321.1	cds3766	Diuraphis noxia	CDS	JOTR01000070 676788..676914 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at JOTR01000070:676788..688373+
coding sequence from alignment at JOTR01000070:676788..688373+

spliced messenger RNA

>rna3866 ID=rna3866|Name=XM_015507835.1|organism=Diuraphis noxia|type=mRNA|length=2702bp|location=Sequence derived from alignment at JOTR01000070:676788..688373+ (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTTTTTACGCTAAAACCTTGATGCAACRTATATCAAAGATCGCTTG
GGACGATCCATTGCCTAGTGATATTGAGGTAGAATGGAGACAATTTCTAG
AGGAATTATCTAGGATTTCTGTTATTGgtactaagACTAAGTTGGCACCC
ATTAAGAAGTTATCAATCCCACGGCTGGAATTATGTGCAGCCTTACTACT
TTCCCGGTGGATGCACAGGATACTTTGCGTACTTAGCAAGAGGTTGTCTA
GTGATGGTGTTTATGGTTGGTCTGACTCTTCTGTRGCCCTGTCATGGATC
ATTAACACCGAATTGCAATATAAGGTTTTTGTTTCGAATAGAGTTCCCCA
AATACAAAATAGGAGTACGGATAATTTTACTTTGTCTCCCAATGAAATCC
CTGAGGTCAAACTTTTTGCCTTGTCTATACAATCGTCGGCACCTACTGTC
GAATGGATTAGTAGATTTTTGTCGTATAACCAATTGCTCGTTGTCATTGC
ATGGGTTCGACRATTTATAGGTCGTTGTCGTAAAMAAACATTCTTAACTC
CTTACCCCAGTAGGTTAGAACTTGATGAAGCATTWAACGTTGTTGTAAAA
GCATCTCAACGYGATTTTGTGGGACAACTaagacataaattaattttatc
tcgACCTATTTCAAAACCATGGTCACAGCTTCGTCCTTTCTTAAATGAAC
ATGGTGTGTTAAGAGTAGGTGGCCGTTTGTCACATGCTCATATCTCAGAA
GAACAAAAGCACCCAATATTACTGTCCAGACTTTCCCATTTatcAATGCT
AGAAACGATTAAGCacaatttaaaaccaaaaatgttcATGCTATGGATTG
TGTTATTCACATTAATTATATGGACTTACTCGTATTATTCGTTGACTGCA
TATGAAGAGATTTTTAGTGAACCACGTTCACTTTTTTTAAACCACATTTC
AAATGAAATGGTTGAAGTAGTATGCACATTAAATTCaactataatttaca
aatatcatCATATATTCATACGCCCAACTCCGACAGTAAGAAACCGAAAA
GACGGAGAAGTAAGTATATTACTTTTGGGTTTGGACGCGGTGTCTCGTAT
GAACTTTCATCGACAAATGCCAAAAACTAGTGCGTTCTTATCTAAAATTG
GAATTGTGGAAATGATAGGTTATAATAAAGTTGAGGACAACACGTTTCCA
AATGTAATTCCTACACTAACTGGAATGTCAATAGAagagttgaaaataaa
ttgttggcctgaaaacaacaatttttttgataactgtAATTTTGTATGGG
ATGATTATAAATATGCTAATTTTAGCACAGCTTTTGCAGAAGATAGTACT
TTAATTggaatgtttaattatttaaaatctggaTTTTTAAAACAACCCAC
TGACCACTATTTAAGACCTATTATGATCCATGCTGAAAACGATATAGGCC
ACGAATCTATTGGAAACACAATAGGTTGTCTTGGCTCTAGGTTGGGTATG
GCCATGTTGCTTGATTATGctttaaaaattgcattatcTATGACTAATCA
CTTATACATGAGTGTATTCTGGACGACGAGTCTAACGCACGATTATATTG
AGTATCCAAAATTTGGCGACGACGATTTAAGAAACTTTTTTGATGCGTTT
AATAAATCAGGCGAGCTCAACAAAACGATTGTCATACTAATGAGTGATCA
TGGAATCAGGTGGGGATGCTTTAGGGACACATACCAGGGTAGTTTGGAGG
ATAAATTACCCATGTTGAATTTCATCATACCGCAATGGTTTCAAAACATG
TATCCCGGAGCAAtggaaaatttgaataaaaacacaaatcgGCTTACTAC
RCCATATGATTTACACGAGACACTATTAGAGTTCATCGACATGAAACAGC
TCGATGACGATTCAATTGCAACACGAATGAAAATGAACGAAAATAAAAGA
GGTACTAGTTTGTTCCTAGAAATTTCCGAAAGGAAAAATTGTRAAACAGC
GGGAATACCTAAAAACTATTGTGCGTGTCATGAGGAGAGGGTAAAATTGG
CTGTAGATGACTCAAACGTCGTTAAAGCTTCCAAAGCCTTAAtgcaatat
ataaatttcaagttGTCGGCACATAATACACTTTGTGCATTTCTAACGTT
ACACGAAATTCACAAAGCGTCAGTTGAAATGAGAAAAGATAATAATTCGG
TAAAAGATTATGAGATCCAAGTAACTACAATTCCTGGTTTTGCGAAATTC
GAAGCAACATTAAGGCAACATAACGATAACTTTAAAATGGTTGGTTCAGT
TAgtagattaaatttatatggCAATCAAAGTATTTGTATAAATGACGCTA
AATTgaagttattatgttattgtatacaTGAAAATTAAACTCAGTCACAT
ACTCGTTACTTGTAATTTCCCAAACTCATATCATTATGTCAATGTCTAAT
ACGATCTAAATATCAATACTCgtttggatataatatactttataataata
attagacttAAAAGGCTGTTTTGGTAACAAAATTTGCCCCCTAAAAACAT
GCTTAGGTTCTTCGCATTTTCCTCAGTTCTCGATAGTCgtagaaacataa
tttttctcCAATATAAACGTGAGAAGTTCTTCTAGATAACTACGTTCcag
attttttttacactgGTTATATTTGCAAttgaattcttattttaaatttt
aa

protein sequence of XM_015507835.1

>rna3866 ID=rna3866|Name=XM_015507835.1|organism=Diuraphis noxia|type=polypeptide|length=796bp
MVFYAKTLMQXISKIAWDDPLPSDIEVEWRQFLEELSRISVIGTKTKLAP
IKKLSIPRLELCAALLLSRWMHRILCVLSKRLSSDGVYGWSDSSVALSWI
INTELQYKVFVSNRVPQIQNRSTDNFTLSPNEIPEVKLFALSIQSSAPTV
EWISRFLSYNQLLVVIAWVRXFIGRCRKXTFLTPYPSRLELDEAXNVVVK
ASQRDFVGQLRHKLILSRPISKPWSQLRPFLNEHGVLRVGGRLSHAHISE
EQKHPILLSRLSHLSMLETIKHNLKPKMFMLWIVLFTLIIWTYSYYSLTA
YEEIFSEPRSLFLNHISNEMVEVVCTLNSTIIYKYHHIFIRPTPTVRNRK
DGEVSILLLGLDAVSRMNFHRQMPKTSAFLSKIGIVEMIGYNKVEDNTFP
NVIPTLTGMSIEELKINCWPENNNFFDNCNFVWDDYKYANFSTAFAEDST
LIGMFNYLKSGFLKQPTDHYLRPIMIHAENDIGHESIGNTIGCLGSRLGM
AMLLDYALKIALSMTNHLYMSVFWTTSLTHDYIEYPKFGDDDLRNFFDAF
NKSGELNKTIVILMSDHGIRWGCFRDTYQGSLEDKLPMLNFIIPQWFQNM
YPGAMENLNKNTNRLTTPYDLHETLLEFIDMKQLDDDSIATRMKMNENKR
GTSLFLEISERKNCXTAGIPKNYCACHEERVKLAVDDSNVVKASKALMQY
INFKLSAHNTLCAFLTLHEIHKASVEMRKDNNSVKDYEIQVTTIPGFAKF
EATLRQHNDNFKMVGSVSRLNLYGNQSICINDAKLKLLCYCIHEN.

mRNA from alignment at JOTR01000070:676788..688373+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna3866 ID=rna3866|Name=XM_015507835.1|organism=Diuraphis noxia|type=mRNA|length=11586bp|location=Sequence derived from alignment at JOTR01000070:676788..688373+ (Diuraphis noxia)
ATGGTTTTTTACGCTAAAACCTTGATGCAACRTATATCAAAGATCGCTTG
GGACGATCCATTGCCTAGTGATATTGAGGTAGAATGGAGACAATTTCTAG
AGGAATTATCTAGGATTTCTGTTATTGGCATCCcgtgattttattttacg
tttccGACATTTTCTTGTCAGTTATGCGGTTTTTGTGATGCATCTAAGCG
TGGATATGCCGCGGTAGTAAATTTACGGATTATAACAGTCTCTAATGATG
TGAaggttattttattaggtactaagACTAAGTTGGCACCCATTAAGAAG
TTATCAATCCCACGGCTGGAATTATGTGCAGCCTTACTACTTTCCCGGTG
GATGCACAGGATACTTTGCGTACTTAGCAAGAGGTTGTCTAGTGATGGTG
TTTATGGTTGGTCTGACTCTTCTGTRGCCCTGTCATGGATCATTAACACC
GAATTGCAATATAAGGTTTTTGTTTCGAATAGAGTTCCCCAAATACAAAG
TATGATTCCCAGCTGCCAGTGGAGGCACGTTAACACTTCTTTGAATCCCG
CTGACTGTGCGTCTCGGGGCTTGTCTCCGGTTGCTCTGATTAACATGTCT
CTTTATTGGCAAGGTCCAGAATTTTGTCACGACCGATTTCAGATAGGAGT
ACGGATAATTTTACTTTGTCTCCCAATGAAATCCCTGAGGTCAAACTTTT
TGCCTTGTCTATACAATCGTCGGCACCTACTGTCGAATGGATTAGTAGAT
TTTTGTCGTATAACCAATTGCTCGTTGTCATTGCATGGGTTCGACRATTT
ATAGGTCGTTGTCGTAAAMAAACATTCTTAACTCCTTACCCCAGTAGGTT
AGAACTTGATGAAGCATTWAACGTTGTTGTAAAAGCATCTCAACGYGATT
TTGTGGGACAACTaagacataaattaattttatctcgACCTATTTCAAAA
CCATGGTCACAGCTTCGTCCTTTCTTAAATGAACATGGTGTGTTAAGAGT
AGGTGGCCGTTTGTCACATGCTCATATCTCAGAAGAACAAAAGCACCCAA
TATTACTGTCCAGACTTTCCCATTTGTTAGTGTTACTCGTTCGTCACTGA
CATAAACTGTTATGCCATGCCGGCCCGCGCGTAATCACGATTTTAGTCTC
GYGACAATTTTGGATAGTAGCTATTCGTCGGTTAATCCGTCAGGAGACCT
TAAAGTGTGTTGTGTGTGTCCGTTTTTCGGCCCGAAACCCCCAACYGTTG
ATGGCCAATTTACCGCCCTCCCGTGTACAACAATGTGGTGTTTTTTCTAA
AGTCGGTATTGACTATGCTGGTCCGTTGCTTTTGCGAGAACACCGCCTTA
GAAAGGCACGTCAATATAAAGTTTACATCGCGGTTTTCGTATGTATGACT
GTCAAATGCGTTCACCTGGAGCCGGTTCTTGATTTGACAACTGATTCGTT
TCTTGCTGCTTTCGATCGGTTCGTTGCAAGGAGAGGACTGCGGAACTAAT
TTTGTGGGTGCTGCACGTCAGCACGTCAACTGCGTGCTTTGGTCAATCAT
GGTGATACTAAACCACGTCTCATCAAAGCCTTTGAGTGTAATTGGCATTT
TAATCCTCCCAGTGCTCCGCACTTCGGAGGCATCTGGTAGGCTGCTGTCA
AATCTGCGAAGTCTTAATTTGTCCGTTCAATTGACACGCAAGTCACAACT
TTAGAAGAGTTTACTACCTTCCTGKCCTGCGTCGAATCCGTATTGAACTC
ACGCCCATTGACTCCACTATCCACTGGCCCGTCTGATTTGGAATGCCTTA
CACCAGGGCATTTTTTGATTGGCCAACCACTTTGTGCTGTTCCTGAGAGA
GATTTGGTTGATGTTCCTCAGAATAGGTTGTCTCGCTGGRAACTCTTGCG
CCAGTGCTCTCAAACCTTTTGGCAACATTGGTCAAACGAGTATCTTAATC
TCTTACAATCCCGAAGCAAATGGTCCACTGATCCGTAAAGCAGCTCTTTG
TGGATGACATGGTCGTCGTTAAAGACAATAGTGCTCCTCCATTAGGGCAA
AACTAGGACGTGTGGTAGAAGTGTTGCCAGGTTCAGACGGTGTAGTTCGG
GTAGCTCGGGTTATTACTCAAGGGGGAGAATTGGTTCACCCTGTTGTGAA
GTTGGTACCGTTACTCACTTACAACGACACATCTACATATATAAACTAAA
GTTACATTTTTCATATGTCCTGtcgattttatatatatactttcattttt
ttattttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaaaaacatat
tacaaaataaaataagcaatcttaaaacatgaataaataaaataattata
actatttatggttaatacagttaaaaatgtataaataccaCAATcacttt
aaatcataaataattaaatcaaattaattatatttatttatacctagtta
gtaataattattattagtgMCACTAATAAAGACAAAATTACCACACGCCA
TACGGTGAGACAATGTTATAGACATAAGTCAATTGCCGTATCGCCGAAAT
CGTCACGTTGAACTGTCGGCGACGCCAAATCACCGACGCTGAGATATCCT
AAATCCTCTGAGCTTACCATCAGGTACCGATCACACTCAAAGACGTMCAC
AAAGTTTTCAACCCGCCAAAAGGTCAAGCCCATGGCGGCCACCACGTCAC
CCTCCGTCTCATAGAATCGCGATATTGCTGGCCGGACGTGATCTAGAAAT
CATGTGATAAAGCCGAGCTTGCGAACGGTGCCAACGAGCCCAAGTACACA
AACACACGACGTCAAGCATCACACCTTAGTACCTTACACTTCACCCAAAC
GACATATCGGCCACATTCACTTCGACTTAGTTGGGCCGTTATCACCATCC
AKCGGATACAAGTACCTACTGAGGTTTTCGACTGATTCACACGCTGGCCA
GAGACGTGGCCGATAAAGAATTCATGWCGACCGCGCAGTTCTTAACAACT
AACTGGATAGCACGTTTCGGCGTGCCTGACGTCAAGGCTGACAGTTTGGG
TCGGATTTCAAATCACTTTAGATCACTTTCGGCATCGAGCACAGTCGRAC
GTCGCCGTATCACCCTCGGGCCGACGTGACGGCAGAACGTATTTTTACCA
CACGCTCAAATCCGCGCTCGCCGAGATAAAATCACCGCAGTGATGGTCAG
CCAAACTGCCAATCKTCCTACTCGCWACACAGTCAATGTRGGCATCGAAA
AAGCTCCGGTCGATTAGCTGACTCATCCCAGTTCACCCCGCTCTAACGTC
GGATAGACAAAGAATGGGCACACCgagttttagatttttaaccARCACTA
ATAAAGGtcaatattcaaataaacattTCCTAGATTGAACTATATTTTAC
GTGCTGAACCGaaagataaataaatgtatttatatttgtattacaaaata
atttcccTAACACTTACGATGGACNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTACGAACTACAAAACTCAAT
GAGCTACATTCGTGCCCACCGAATATGCAAGTGAACTAACTACTAAGTCA
CTAAACTAAACACAGATGAATACATGGCTGCCACCAGTTAACTGATATCA
ATGatgaattaatgataaataagagTGCGATCGAaccgaatattttttat
atgcggAATTTGCYttagattttataaattgaaccaaaaaaaaatagatt
aaagtTTCTGTGTRAACTGTTTCTAACTAAATAGAATTatgatatactga
tattattattgttgtagactgtagtaaatacaataataatattaagtccc
TTTTCCTACACCCACCAACTTTCCTCAaacgactataatatacatattat
attccatcTATCAATtcttaataatcaatttatcattGTAACTTAACAAT
AATTCACCATTTCCMGTAAGCTTAatagcatatttaaaaaaaaaaattat
aattttatgcatgGTTTTTCACTAATGATGGTTGAAAAGCAACAACCAAC
CAGCCAACCGCGCTGCTTTGGAAGTCAGATATGAGCAAATTCCAACCTCC
CCTCCTCCCTCAAATGACGCCACTGAATATATACGATTTATGCAATGTAT
ATTAATCCTACATTAACGGTTATTAACATGTATACTATAATGGTARTAAA
AATGTACTAACACCTATGTGTCAGAATTATTGCTTGAACAACAAATCTGT
GGCATATAAATCGACAGTGTTATAATCGATCTTGGCTGTATTAATTATTC
AGTTGTTTATATATCCAATAGGtagtgtttattaataaaatagcttCATC
TAAATTTGTCTTAGTTGATAAATTCCTCatcaacaatattgtattgcgat
aaaatatatagtttacttCAAGTTTAACatgagttttacatttttataga
tcAATGCTAGAAACGATTAAGCacaatttaaaaccaaaaatgttcATGCT
ATGGATTGTGTTATTCACATTAATTATATGGACTTACTCGTATTATTCGT
TGACTGCATATGAAGAGATTTTTAGTGAACCACGTTCACTTTTTTTAAAC
CACAGTAAGTGTTAAATTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TAAACAGTAAAACACTTCAATATTTGAGTATTGTCAAAATTttgaaagct
taaaaaaaactttaagggTGCCCCAGTGGTAGTCTTCTGCATACCCTAAA
ATGGAGGCCTTCGCACRCCTATTTAAGGTAGTTAAATAACGCtgctatat
acaatttacaatgttgTTTGGGCAAAGCTTCGTTGGGCTTATTATAGGTT
AACTTATTGAAAGGTTCAGCTCCCTTTCAATGTTTGGGCTAAttgtataa
ctaaatattatgaaatggtCTCAAACAGCATTTTTGATTTATCacttaag
tttaatataaaaatttttatgatatgaaGTATACACTAaacattatcaaa
attataataacatatttaaaaaaacgaaaatacgatgtacctatttaata
tatgaaaCGAATTTCATAGTTTAAAAGCGTTTCCGGTGACTTTCCCRAAA
ACAActcattttgtattaaaatctaGGCCtagttattaatatgttttaaa
ttttaggtaaGCAGAATGGATCATGTTAATCCACTACCTTCAACCCAAgt
gttctaaataaataatgtaaataaatcgtcaaaaattaaaatattatagc
aaaGTAATTAGTTAGCTGTCCAACTACTCAAACTGATTTGGAGAACAGTT
TTttaggttatattttatagtttctaaATAGAAACTTGACCTGCAGTTTT
CATGTTCCTTTTCATAATCCTGTTCTTTAGAGGGAGTATATTAATCGAAC
CgtccaaaaaatgcaaaatggaTGCAATTAGTTAATAACTGAAATAGGGA
AAAACTAAACtaattaattcttatatatataatacacatatatatatatg
atactaCTTAACTGTCTATAAtttgtgatataaaattaaaattttatttt
ataatgttgtggTAGGTTATTTGAATTGTATGAATCTCTTAAAGTTTTTA
CgacttttgtttttgttgtttattcTTACAATTTTAACTGACACCCTTAA
AAACAAACTGACTCACTAACAGGCTCACTTGACATTTACATAGTACATCC
TAACGCTAATCCTAATTACCTAATAGCGTTCacaacatattacataatat
ttttaaattaagtggtAAGATACACCATACTTGCAATGGtctgtgatata
aaataataataatatactagatATGTTATTATACAGGGTTTAACAGTATT
AWACTTTAACTGtactatttaacaaatatagtaatatttgtaatggaaat
ttgtttaataatactgttacaccttatataacaataactgaataacataa
ctataaatttatatgtatacgatcatattatttttattttaaattagaaa
tattatgtgaaaataattgtaaatgtattatttttcttatagacTTGGCR
aaaaagtatattttgtacacaaCACAACAGTTTCAAATGAAATGGTTGAA
GTAGTATGCACATTAAATTCaactataatttacaaatatcatCATATATT
CATACGCCCAACTCCGACAGTAAGAAACCGAAAAGACGGAGAAGTAAGTA
TATTACTTTTGGGTTTGGACGCGGTGTCTCGTATGAACTTTCATCGACAA
ATGCCAAAAACTAGTGCGTTCTTATCTAAAATTGGAATTGTGGAAATGAT
AGGTTATAATAAAGTTGAGGACAACACGTTTCCAAATGTAATTCCTACAC
TAACTGGAATGTCAATAGAagagttgaaaataaattgttggcctgaaaac
aacaatttttttgataactgtAATTTTGTATGGGATGATTATAAATATGC
TAATTTTAGCACAGCTTTTGCAGAAGATAGTACTTTAATTggaatgttta
attatttaaaatctggaTTTTTAAAACAACCCACTGACCACTATTTAAGA
CCTATTATGATCCATGCTGAAAACGATATAGGCCACGAATCTATTGGAAA
CACAATAGGTTGTCTTGGCTCTAGGTTGGGTATGGCCATGTTGCTTGATT
ATGctttaaaaattgcattatcTATGACTAATCACTTATACATGAGTGTA
TTCTGGACGACGAGTCTAACGCACGATTATATTGAGTATCCAAAATTTGG
CGACGACGATTTAAGAAACTTTTTTGATGCGTTTAATAAATCAGGCGAGC
TCAACAAAACGATTGTCATACTAATGAGTGATCATGGAATCAGGTGGGGA
TGCTTTAGGGACACATACCAGGGTAGTTTGGAGGATAAATTACCCATGTT
GAATTTCATCATACCGCAATGGTTTCAAAACATGTATCCCGGAGCAAtgg
aaaatttgaataaaaacacaaatcgGCTTACTACRCCATATGATTTACAC
GAGACACTATTAGAGTTCATCGACATGAAACAGCTCGATGACGATTCAAT
TGCAACACGAATGAAAATGAACGAAAATAAAAGAGGTACTAGTTTGTTCC
TAGAAATTTCCGAAAGGAAAAATTGTRAAACAGCGGGAATACCTAAAAAC
TATTGTGCGTGTCATGAGGAGAGGGTAAAATTGGCTGTAGATGACTCAAA
CGTCGTTAAAGCTTCCAAAGCCTTAAtgcaatatataaatttcaagttGT
CGGCACATAATACACTTTGTGCATTTCTAACGTTACACGAAATTCACAAA
GCGTCAGTTGAAATGAGAAAAGATAATAATTCGGTAAAAGATTATGAGAT
CCAAGTAACTACAATTCCTGGTTTTGCGAAATTCGAAGCAACATTAAGGC
AACATAACGATAACTTTAAAATGGTTGGTTCAGTTAgtagattaaattta
tatggCAATCAAAGTATTTGTATAAATGACGCTAAATTgaagttattatg
ttattgtatacaTGAAAATTAAACTCAGTCACATACTCGTTACTTGTAAT
TTCCCAAACTCATATCATTATGTCAATGTCTAATACGATCTAAATATCAA
TACTCgtttggatataatatactttataataataattagacttAAAAGGC
TGTTTTGGTAACAAAATTTGCCCCCTAAAAACATGCTTAGGTTCTTCGCA
TTTTCCTCAGTTCTCGATAGTCgtagaaacataatttttctcCAATATAA
ACGTGAGAAGTTCTTCTAGATAACTACGTTCcagattttttttacactgG
TTATATTTGCAAttgaattcttattttaaattttaa

Coding sequence (CDS) from alignment at JOTR01000070:676788..688373+

>rna3866 ID=rna3866|Name=XM_015507835.1|organism=Diuraphis noxia|type=CDS|length=2388bp|location=Sequence derived from alignment at JOTR01000070:676788..688373+ (Diuraphis noxia)
ATGGTTTTTTACGCTAAAACCTTGATGCAACRTATATCAAAGATCGCTTG
GGACGATCCATTGCCTAGTGATATTGAGGTAGAATGGAGACAATTTCTAG
AGGAATTATCTAGGATTTCTGTTATTGgtactaagACTAAGTTGGCACCC
ATTAAGAAGTTATCAATCCCACGGCTGGAATTATGTGCAGCCTTACTACT
TTCCCGGTGGATGCACAGGATACTTTGCGTACTTAGCAAGAGGTTGTCTA
GTGATGGTGTTTATGGTTGGTCTGACTCTTCTGTRGCCCTGTCATGGATC
ATTAACACCGAATTGCAATATAAGGTTTTTGTTTCGAATAGAGTTCCCCA
AATACAAAATAGGAGTACGGATAATTTTACTTTGTCTCCCAATGAAATCC
CTGAGGTCAAACTTTTTGCCTTGTCTATACAATCGTCGGCACCTACTGTC
GAATGGATTAGTAGATTTTTGTCGTATAACCAATTGCTCGTTGTCATTGC
ATGGGTTCGACRATTTATAGGTCGTTGTCGTAAAMAAACATTCTTAACTC
CTTACCCCAGTAGGTTAGAACTTGATGAAGCATTWAACGTTGTTGTAAAA
GCATCTCAACGYGATTTTGTGGGACAACTaagacataaattaattttatc
tcgACCTATTTCAAAACCATGGTCACAGCTTCGTCCTTTCTTAAATGAAC
ATGGTGTGTTAAGAGTAGGTGGCCGTTTGTCACATGCTCATATCTCAGAA
GAACAAAAGCACCCAATATTACTGTCCAGACTTTCCCATTTatcAATGCT
AGAAACGATTAAGCacaatttaaaaccaaaaatgttcATGCTATGGATTG
TGTTATTCACATTAATTATATGGACTTACTCGTATTATTCGTTGACTGCA
TATGAAGAGATTTTTAGTGAACCACGTTCACTTTTTTTAAACCACATTTC
AAATGAAATGGTTGAAGTAGTATGCACATTAAATTCaactataatttaca
aatatcatCATATATTCATACGCCCAACTCCGACAGTAAGAAACCGAAAA
GACGGAGAAGTAAGTATATTACTTTTGGGTTTGGACGCGGTGTCTCGTAT
GAACTTTCATCGACAAATGCCAAAAACTAGTGCGTTCTTATCTAAAATTG
GAATTGTGGAAATGATAGGTTATAATAAAGTTGAGGACAACACGTTTCCA
AATGTAATTCCTACACTAACTGGAATGTCAATAGAagagttgaaaataaa
ttgttggcctgaaaacaacaatttttttgataactgtAATTTTGTATGGG
ATGATTATAAATATGCTAATTTTAGCACAGCTTTTGCAGAAGATAGTACT
TTAATTggaatgtttaattatttaaaatctggaTTTTTAAAACAACCCAC
TGACCACTATTTAAGACCTATTATGATCCATGCTGAAAACGATATAGGCC
ACGAATCTATTGGAAACACAATAGGTTGTCTTGGCTCTAGGTTGGGTATG
GCCATGTTGCTTGATTATGctttaaaaattgcattatcTATGACTAATCA
CTTATACATGAGTGTATTCTGGACGACGAGTCTAACGCACGATTATATTG
AGTATCCAAAATTTGGCGACGACGATTTAAGAAACTTTTTTGATGCGTTT
AATAAATCAGGCGAGCTCAACAAAACGATTGTCATACTAATGAGTGATCA
TGGAATCAGGTGGGGATGCTTTAGGGACACATACCAGGGTAGTTTGGAGG
ATAAATTACCCATGTTGAATTTCATCATACCGCAATGGTTTCAAAACATG
TATCCCGGAGCAAtggaaaatttgaataaaaacacaaatcgGCTTACTAC
RCCATATGATTTACACGAGACACTATTAGAGTTCATCGACATGAAACAGC
TCGATGACGATTCAATTGCAACACGAATGAAAATGAACGAAAATAAAAGA
GGTACTAGTTTGTTCCTAGAAATTTCCGAAAGGAAAAATTGTRAAACAGC
GGGAATACCTAAAAACTATTGTGCGTGTCATGAGGAGAGGGTAAAATTGG
CTGTAGATGACTCAAACGTCGTTAAAGCTTCCAAAGCCTTAAtgcaatat
ataaatttcaagttGTCGGCACATAATACACTTTGTGCATTTCTAACGTT
ACACGAAATTCACAAAGCGTCAGTTGAAATGAGAAAAGATAATAATTCGG
TAAAAGATTATGAGATCCAAGTAACTACAATTCCTGGTTTTGCGAAATTC
GAAGCAACATTAAGGCAACATAACGATAACTTTAAAATGGTTGGTTCAGT
TAgtagattaaatttatatggCAATCAAAGTATTTGTATAAATGACGCTA
AATTgaagttattatgttattgtatacaTGAAAATTAA

Metabolic Data

View metabolic data for rna3866 on AphidCyc