|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107161447 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein |
| Product | uncharacterized LOC107161447 |
| Transcript id | XM_015507860.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107161447 |
| Genbank | XM_015507860.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107161447 | gene2630 | Diuraphis noxia | gene | JOTR01000070 691318..691836 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015363346.1 | cds3767 | Diuraphis noxia | CDS | JOTR01000070 691756..691836 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id33719 | id33719 | Diuraphis noxia | exon | JOTR01000070 691318..691680 - |
| id33718 | id33718 | Diuraphis noxia | exon | JOTR01000070 691756..691836 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna3867 ID=rna3867|Name=XM_015507860.1|organism=Diuraphis noxia|type=mRNA|length=444bp|location=Sequence derived from alignment at JOTR01000070:691318..691836- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTTTGATTATTTTTCTTGTTTTTGCGAAATACATTCCATTATACCG
ATTATACCACGTGAAGCACTGTGACAATTCAACATCAAACGGAAATACCG
AAAACAAAACTGATTCATCTCCGCCTATAAAATCGCCGATTTCGTTTCTT
ATTGTAAATTTTGTCTACGTTTACGCCATTATGATAATCATTATTTGTTT
TTACGGCTTATATGGATGGGCCGCGATGAACGTGATAGTTGCTATTGAAA
AATATTCAAAACAAACCTGTAATATCGAAAATGCTGATAACAGCAGCAGC
GACATCGTTTTGATTTCACAAAATGCAGAGGACGATAAATTGATTCCCGA
GACAATTCCATTGCAAATTTTATCAGAGACAATGGAATCTATTAATACTA
ATAATGACCATTGTACGTGGGTAGGCGATTGGAACAAATATTGA back to topprotein sequence of XM_015507860.1 >rna3867 ID=rna3867|Name=XM_015507860.1|organism=Diuraphis noxia|type=polypeptide|length=148bp
MFLIIFLVFAKYIPLYRLYHVKHCDNSTSNGNTENKTDSSPPIKSPISFL
IVNFVYVYAIMIIIICFYGLYGWAAMNVIVAIEKYSKQTCNIENADNSSS
DIVLISQNAEDDKLIPETIPLQILSETMESINTNNDHCTWVGDWNKY. back to topmRNA from alignment at JOTR01000070:691318..691836- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna3867 ID=rna3867|Name=XM_015507860.1|organism=Diuraphis noxia|type=mRNA|length=519bp|location=Sequence derived from alignment at JOTR01000070:691318..691836- (Diuraphis noxia)
ATGTTTTTGATTATTTTTCTTGTTTTTGCGAAATACATTCCATTATACCG
ATTATACCACGTGAAGCACTGTGACAATTCAGTGAGTATCGGCYACGATT
TTTATATTGTAAAAAAACAAACAATTAATGCACACACCTGTGTGTTTTAT
ATCCAGACATCAAACGGAAATACCGAAAACAAAACTGATTCATCTCCGCC
TATAAAATCGCCGATTTCGTTTCTTATTGTAAATTTTGTCTACGTTTACG
CCATTATGATAATCATTATTTGTTTTTACGGCTTATATGGATGGGCCGCG
ATGAACGTGATAGTTGCTATTGAAAAATATTCAAAACAAACCTGTAATAT
CGAAAATGCTGATAACAGCAGCAGCGACATCGTTTTGATTTCACAAAATG
CAGAGGACGATAAATTGATTCCCGAGACAATTCCATTGCAAATTTTATCA
GAGACAATGGAATCTATTAATACTAATAATGACCATTGTACGTGGGTAGG
CGATTGGAACAAATATTGA back to topCoding sequence (CDS) from alignment at JOTR01000070:691318..691836- >rna3867 ID=rna3867|Name=XM_015507860.1|organism=Diuraphis noxia|type=CDS|length=444bp|location=Sequence derived from alignment at JOTR01000070:691318..691836- (Diuraphis noxia)
ATGTTTTTGATTATTTTTCTTGTTTTTGCGAAATACATTCCATTATACCG
ATTATACCACGTGAAGCACTGTGACAATTCAACATCAAACGGAAATACCG
AAAACAAAACTGATTCATCTCCGCCTATAAAATCGCCGATTTCGTTTCTT
ATTGTAAATTTTGTCTACGTTTACGCCATTATGATAATCATTATTTGTTT
TTACGGCTTATATGGATGGGCCGCGATGAACGTGATAGTTGCTATTGAAA
AATATTCAAAACAAACCTGTAATATCGAAAATGCTGATAACAGCAGCAGC
GACATCGTTTTGATTTCACAAAATGCAGAGGACGATAAATTGATTCCCGA
GACAATTCCATTGCAAATTTTATCAGAGACAATGGAATCTATTAATACTA
ATAATGACCATTGTACGTGGGTAGGCGATTGGAACAAATATTGA back to top
|