OSCA002230-PA (polypeptide) Ostrinia scapulalis

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameOSCA002230-RA
Unique NameOSCA002230-PA
Typepolypeptide
OrganismOstrinia scapulalis (Adzuki bean borer)
Sequence length23
Homology
The following BLAST results are available for this feature:
BLAST of OSCA002230-RA vs. genbank:protein
Analysis Date: 2017-06-22 (Blastp: Annotation v1.2 vs NR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterProScan: Annotation v1.2
Date Performed: 2017-06-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023626Ribosomal protein L39e domainGENE3D1.10.1620.10coord: 1..23
e-value: 6.9E-13
score: 47.7
IPR023626Ribosomal protein L39e domainSUPERFAMILY48662Ribosomal protein L39ecoord: 1..22
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 1..23
e-value: 9.0E-11
score: 40.9
IPR020083Ribosomal protein L39e, conserved sitePROSITEPS00051RIBOSOMAL_L39Ecoord: 2..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
newscf_515contignewscf_515:41943..42863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: Annotation v1.22017-06-22
Blastp: Annotation v1.2 vs NR2017-06-22
Whole Genome Assembly (v1.2) and Annotation (v1.2) of Ostrinia scapulalis2017-06-22
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
OSCA002230-RAOSCA002230-RAOstrinia scapulalismRNAnewscf_515 41762..43042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>OSCA002230-PA ID=OSCA002230-PA|Name=OSCA002230-RA|organism=Ostrinia scapulalis|type=polypeptide|length=23bp
MRTGNTIRYNAKRRHWRRTKLKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR020083Ribosomal_L39_CS
IPR000077Ribosomal_L39
IPR023626Ribosomal_L39e_dom