HiSeq10034_p (polypeptide) Thaumetopoea pityocampa

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameHiSeq10034
Unique NameHiSeq10034_p
Typepolypeptide
OrganismThaumetopoea pityocampa (Pine processionary)
Sequence length217
Homology
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (uncharacterized protein LOC106136502 [Amyelois transitella])

HSP 1 Score: 372.859 bits (956), Expect = 7.080e-116
Identity = 177/212 (83.49%), Postives = 195/212 (91.98%), Query Frame = 0
Query:    6 RDEPPRRVSSPAVTGARAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            +++PPRR  +PA T  R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLA+AGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEK+AESHH+NDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   S++S+   +++  ++N ERDSFG
Sbjct: 1171 KEDPPRR--TPAATQPRVTSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLALAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKDAESHHLNDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSG--ESANSTNETNNTNSTSNGERDSFG 1378          
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (lysine-specific demethylase 3A isoform X2 [Papilio xuthus])

HSP 1 Score: 357.836 bits (917), Expect = 4.567e-111
Identity = 175/196 (89.29%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   22 RAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EED+KLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SSSSSE+N+S+  +TN ERDSFG
Sbjct:  775 RPSSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDRKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGDSGSSSSSESNNSTTATTNGERDSFG 970          
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (uncharacterized protein LOC106122068 isoform X1 [Papilio xuthus])

HSP 1 Score: 357.451 bits (916), Expect = 2.396e-110
Identity = 175/196 (89.29%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   22 RAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EED+KLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SSSSSE+N+S+  +TN ERDSFG
Sbjct: 1193 RPSSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDRKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGDSGSSSSSESNNSTTATTNGERDSFG 1388          
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (lysine-specific demethylase 3A [Papilio machaon] >gi|943976987|ref|XP_014369581.1| PREDICTED: lysine-specific demethylase 3A [Papilio machaon])

HSP 1 Score: 354.755 bits (909), Expect = 5.444e-110
Identity = 176/196 (89.80%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   22 RAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EED+KLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SSSSSE+NSS+  +TN ERDSFG
Sbjct:  775 RPSSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDRKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGDSGSSSSSESNSSTTATTNGERDSFG 970          
BLAST of HiSeq10034 vs. null
Match: Lysine-specific (demethylase 3A [Papilio xuthus])

HSP 1 Score: 354.369 bits (908), Expect = 1.116e-109
Identity = 176/196 (89.80%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   22 RAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EED+KLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SSSSSE+NSS+  +TN ERDSFG
Sbjct:  860 RPSSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDRKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGDSGSSSSSESNSSTTATTNGERDSFG 1055          
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (lysine-specific demethylase 3B [Bombyx mori])

HSP 1 Score: 354.755 bits (909), Expect = 1.919e-109
Identity = 174/199 (87.44%), Postives = 188/199 (94.47%), Query Frame = 0
Query:   19 TGARAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            T  + P DSFLQ+GPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N DKT+AWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYK+R +   T++SSSET+S+S V+TN ERDSFG
Sbjct: 1204 TPVKPPQDSFLQSGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNTDKTVAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKTRTTTEATTNSSSETSSTSNVTTNGERDSFG 1402          
BLAST of HiSeq10034 vs. null
Match: Lysine-specific (demethylase 3B [Papilio machaon])

HSP 1 Score: 353.984 bits (907), Expect = 2.513e-109
Identity = 176/196 (89.80%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   22 RAPADSFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            R  ++SFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+EED+KLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SSSSSE+NSS+  +TN ERDSFG
Sbjct:  983 RPSSESFLQNGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDRKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGDSGSSSSSESNSSTTATTNGERDSFG 1178          
BLAST of HiSeq10034 vs. null
Match: PREDICTED: (lysine-specific demethylase 3A-A, partial [Plutella xylostella])

HSP 1 Score: 291.582 bits (745), Expect = 7.198e-98
Identity = 139/160 (86.88%), Postives = 148/160 (92.50%), Query Frame = 0
Query:   58 MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKD +EEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+NDDKTIAWKRVVQGVREICDVCETTLFN HWTCG+CGFVVC+DCYKSR SG   +SS++E+NS+     N ERDSFG
Sbjct:    1 MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDTEEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNDDKTIAWKRVVQGVREICDVCETTLFNLHWTCGRCGFVVCLDCYKSRTSGENGTSSNAESNSN---LNNGERDSFG 157          
BLAST of HiSeq10034 vs. null
Match: JmjC (domain-containing histone demethylation protein 2B, partial [Pararge aegeria])

HSP 1 Score: 297.36 bits (760), Expect = 5.452e-95
Identity = 138/160 (86.25%), Postives = 152/160 (95.00%), Query Frame = 0
Query:   58 MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDA+E+DKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKT+AWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR S GE+ ++ SET++S+  + N ERDSFG
Sbjct:    1 MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEDDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTVAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTS-GESGNTPSETSNSTSATPNGERDSFG 159          
BLAST of HiSeq10034 vs. null
Match: putative (jumonji domain containing 1B [Danaus plexippus])

HSP 1 Score: 298.901 bits (764), Expect = 8.485e-94
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0
Query:   58 MPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKRVVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSETNSSSGVSTNIERDSFG 217
            MPNIFCRFYAFRRLK+AKNRQLAIAGFSDPYKDA+EEDKKLWLSSSAGAA LDIEMSCFLLREIGDQFCELLQQEKEAESHH+N+DKTIAWKRVVQGVRE+CDVCETTLFNFHWTCGKCGFVVC+DCYKSR SG   SS S   NSSS  + N ERDSFG
Sbjct:    1 MPNIFCRFYAFRRLKFAKNRQLAIAGFSDPYKDAEEEDKKLWLSSSAGAAHLDIEMSCFLLREIGDQFCELLQQEKEAESHHLNEDKTIAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKSRTSGEAGSSPSETANSSSNTTANGERDSFG 160          
The following BLAST results are available for this feature:
BLAST of HiSeq10034 vs. null
Analysis Date: 2017-08-29 (Blastp: Transcriptome 1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
PREDICTED:7.080e-11683.49uncharacterized protein LOC106136502 [Amyelois tra... [more]
PREDICTED:4.567e-11189.29lysine-specific demethylase 3A isoform X2 [Papilio... [more]
PREDICTED:2.396e-11089.29uncharacterized protein LOC106122068 isoform X1 [P... [more]
PREDICTED:5.444e-11089.80lysine-specific demethylase 3A [Papilio machaon] >... [more]
Lysine-specific1.116e-10989.80demethylase 3A [Papilio xuthus][more]
PREDICTED:1.919e-10987.44lysine-specific demethylase 3B [Bombyx mori][more]
Lysine-specific2.513e-10989.80demethylase 3B [Papilio machaon][more]
PREDICTED:7.198e-9886.88lysine-specific demethylase 3A-A, partial [Plutell... [more]
JmjC5.452e-9586.25domain-containing histone demethylation protein 2B... [more]
putative8.485e-9487.50jumonji domain containing 1B [Danaus plexippus][more]

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InterPro
Analysis Name: InterProScan: Transcriptome 1.0
Date Performed: 2017-08-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 153..194
e-value: 4.1E-4
score: 19.5
NoneNo IPR availablePANTHERPTHR12549JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEINcoord: 27..188
NoneNo IPR availablePANTHERPTHR12549:SF11PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN-RELATEDcoord: 27..188

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: Transcriptome 1.02017-08-29
Blastp: Transcriptome 1.0 vs NR2017-08-29
Transcriptome denovo Assembly (v1.0) of Thaumetopoea pityocampa2016-11-28
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
HiSeq10034HiSeq10034Thaumetopoea pityocampamRNA?


Sequences
The following sequences are available for this feature:

polypeptide sequence

>HiSeq10034_p ID=HiSeq10034_p|Name=HiSeq10034|organism=Thaumetopoea pityocampa|type=polypeptide|length=217bp
RGGRRRDEPPRRVSSPAVTGARAPADSFLQNGPCFEVAPRLAKCRECRWS
PAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDADEEDKKLWL
SSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHINDDKTIAWKR
VVQGVREICDVCETTLFNFHWTCGKCGFVVCIDCYKSRISGGETSSSSSE
TNSSSGVSTNIERDSFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD