HiSeq10399_p (polypeptide) Thaumetopoea pityocampa

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	HiSeq10399
Unique Name	HiSeq10399_p
Type	polypeptide
Organism	Thaumetopoea pityocampa (Pine processionary)
Sequence length	257

Homology

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like [Plutella xylostella])

HSP 1 Score: 264.618 bits (675), Expect = 3.813e-82
Identity = 129/215 (60.00%), Postives = 162/215 (75.35%), Query Frame = 0

Query:   12 VVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREH-QLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEV 225
            V  V  G    + L + AL  LL+   VRD+PV V+SVAG+FR GKSFLL FFLRYL+ +    +  G W+G ED PL GF WR G +RET G+ LWS+P    L +GE+V +LLMDTQGTFD+EST++D++T+FALST++SS QIYN+ +N++EDDLQHL LFTDYGRLAAD+ + GGK FQ LQFL+RDWS+ +EYP GA GGE LL KRLEV
Sbjct:   13 VSVVLPGPEHSFTLAEDALAELLLRDDVRDRPVVVISVAGAFRKGKSFLLDFFLRYLHHTYTLGESGGDWLGAEDGPLQGFAWRGGWDRETTGLLLWSQPFKATLPSGEKVVILLMDTQGTFDSESTVRDNATVFALSTMLSSTQIYNLSQNLEEDDLQHLQLFTDYGRLAADS-SKGGKPFQKLQFLIRDWSYPYEYPYGADGGEKLLKKRLEV 226

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like [Amyelois transitella])

HSP 1 Score: 259.996 bits (663), Expect = 2.655e-80
Identity = 128/222 (57.66%), Postives = 164/222 (73.87%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPR--YVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQ-WMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEV 225
            G  +QVV      GP   ++L+++AL  LL+   ++D+ V V+SVAG+FR GKSFLL FFLRY++        G  W+G  D+PL GF WR G ER+T G+HLWS+P    LDNGE+V VLLMDTQGTFD++ST++D++T+FALST++SSVQIYN+  NI EDDLQHL LFTDYG LA    +  GK FQ LQFLVRDWS+ +EYP GA+GG+ LL+KRLEV
Sbjct:   11 GRGIQVVV----PGPEHTFILDEEALSKLLLREDIKDRAVVVLSVAGAFRKGKSFLLDFFLRYMHHKYNLGETGDGWLGAVDEPLKGFPWRGGSERDTTGLHLWSQPFKATLDNGEKVVVLLMDTQGTFDSQSTVKDNATVFALSTMLSSVQIYNLSLNIDEDDLQHLQLFTDYGSLAQQKSS--GKPFQKLQFLVRDWSYDYEYPYGAEGGQQLLSKRLEV 226

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-2 [Strongylocentrotus purpuratus])

HSP 1 Score: 259.61 bits (662), Expect = 3.745e-80
Identity = 135/250 (54.00%), Postives = 166/250 (66.40%), Query Frame = 0

Query:    6 LGEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVSAACRQAAVGRPTIHNHRCSSGLFIAPFCG 255
            +GE VQ++T ++     + LN +AL  LL+   VRDK V VVSVAG+FR GKSFLL F LRYLN     Q +  W+G  D PL GF WR G ERET GI  WSK       NGEEVAV+LMDTQG FD+EST++D +T+FALST+ SSVQ+YN+ +NIQEDDLQHLHLFT+YGRLA +  + G K FQ L FLVRDWS  +EY  G  GG  LL+K+L  SA  ++    R  I +     G F+ P  G
Sbjct:   10 IGEPVQIITTTDDHS--FELNHEALDELLLNEDVRDKKVCVVSVAGAFRKGKSFLLDFMLRYLNM----QGSSDWLGPGDQPLSGFSWRGGSERETTGIWAWSKVFLCPGPNGEEVAVILMDTQGAFDSESTVRDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLHLFTEYGRLAMEQDSSGAKPFQSLNFLVRDWSFPYEYAFGESGGSKLLDKKLHQSAKHKELQDVRRHITSCFKRLGCFLMPHPG 253

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like isoform X4 [Aplysia californica])

HSP 1 Score: 257.299 bits (656), Expect = 4.543e-79
Identity = 127/220 (57.73%), Postives = 163/220 (74.09%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  ++    ++ L+++AL  +L+ + V+DK VA+VSVAGSFR GKSFLL FFLRYL+A         W+G E+ PL GF WR G ER+T GI +WS+P  VK  +GEE+ +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL VS
Sbjct:   13 GEPVQIVVATDNH--QFELDEEALEQILLRSDVKDKNVAIVSVAGSFRKGKSFLLDFFLRYLSAGGA----PDWLGDENAPLEGFSWRGGSERDTTGILMWSEPFIVKTRDGEEIVLLLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNISKPFQALQFLVRDWSFPYEAPYGAAGGRQILEKRLLVS 226

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like isoform X1 [Aplysia californica])

HSP 1 Score: 257.299 bits (656), Expect = 6.441e-79
Identity = 127/220 (57.73%), Postives = 163/220 (74.09%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  ++    ++ L+++AL  +L+ + V+DK VA+VSVAGSFR GKSFLL FFLRYL+A         W+G E+ PL GF WR G ER+T GI +WS+P  VK  +GEE+ +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL VS
Sbjct:   39 GEPVQIVVATDNH--QFELDEEALEQILLRSDVKDKNVAIVSVAGSFRKGKSFLLDFFLRYLSAGGA----PDWLGDENAPLEGFSWRGGSERDTTGILMWSEPFIVKTRDGEEIVLLLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNISKPFQALQFLVRDWSFPYEAPYGAAGGRQILEKRLLVS 252

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-1-like isoform X3 [Biomphalaria glabrata])

HSP 1 Score: 256.529 bits (654), Expect = 8.094e-79
Identity = 124/220 (56.36%), Postives = 161/220 (73.18%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  +E     + L++ AL  +L+   V+DK VA+VSVAG+FR GKSFLL FFLRYL+A +       W+G ++ PL GF WR G +R+T GI +WS+P  +   NGEEV +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL++S
Sbjct:   11 GEPVQIVIATENHT--FDLDEPALEKILLRKDVQDKMVAIVSVAGAFRKGKSFLLDFFLRYLSAGQHMTGEEDWLGDDNAPLEGFSWRGGSDRDTTGILMWSEPFFMTNKNGEEVVILLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNVSKPFQTLQFLVRDWSFPYEAPYGAAGGRQILEKRLKIS 228

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like isoform X2 [Aplysia californica])

HSP 1 Score: 256.914 bits (655), Expect = 8.489e-79
Identity = 127/220 (57.73%), Postives = 163/220 (74.09%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  ++    ++ L+++AL  +L+ + V+DK VA+VSVAGSFR GKSFLL FFLRYL+A         W+G E+ PL GF WR G ER+T GI +WS+P  VK  +GEE+ +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL VS
Sbjct:   38 GEPVQIVVATDNH--QFELDEEALEQILLRSDVKDKNVAIVSVAGSFRKGKSFLLDFFLRYLSAGGA----PDWLGDENAPLEGFSWRGGSERDTTGILMWSEPFIVKTRDGEEIVLLLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNISKPFQALQFLVRDWSFPYEAPYGAAGGRQILEKRLLVS 251

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-like isoform X3 [Aplysia californica])

HSP 1 Score: 256.914 bits (655), Expect = 8.548e-79
Identity = 127/220 (57.73%), Postives = 163/220 (74.09%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  ++    ++ L+++AL  +L+ + V+DK VA+VSVAGSFR GKSFLL FFLRYL+A         W+G E+ PL GF WR G ER+T GI +WS+P  VK  +GEE+ +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL VS
Sbjct:   32 GEPVQIVVATDNH--QFELDEEALEQILLRSDVKDKNVAIVSVAGSFRKGKSFLLDFFLRYLSAGGA----PDWLGDENAPLEGFSWRGGSERDTTGILMWSEPFIVKTRDGEEIVLLLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNISKPFQALQFLVRDWSFPYEAPYGAAGGRQILEKRLLVS 245

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BLAST of HiSeq10399 vs. null
Match: PREDICTED: (atlastin-1-like isoform X1 [Biomphalaria glabrata])

HSP 1 Score: 256.144 bits (653), Expect = 1.003e-78
Identity = 124/220 (56.36%), Postives = 161/220 (73.18%), Query Frame = 0

Query:    7 GEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVS 226
            GE VQ+V  +E     + L++ AL  +L+   V+DK VA+VSVAG+FR GKSFLL FFLRYL+A +       W+G ++ PL GF WR G +R+T GI +WS+P  +   NGEEV +LLMDTQG FD+EST++D +TIFALST+ISSVQ++N+ +NIQEDDLQHL LFT+YGRLA +A  +  K FQ LQFLVRDWS  +E P GA GG  +L KRL++S
Sbjct:   18 GEPVQIVIATENHT--FDLDEPALEKILLRKDVQDKMVAIVSVAGAFRKGKSFLLDFFLRYLSAGQHMTGEEDWLGDDNAPLEGFSWRGGSDRDTTGILMWSEPFFMTNKNGEEVVILLMDTQGAFDSESTVKDCATIFALSTMISSVQVFNLTQNIQEDDLQHLQLFTEYGRLALEANDNVSKPFQTLQFLVRDWSFPYEAPYGAAGGRQILEKRLKIS 235

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BLAST of HiSeq10399 vs. null
Match: hypothetical (protein TRIADDRAFT_59772 [Trichoplax adhaerens] >gi|190581528|gb|EDV21604.1| hypothetical protein TRIADDRAFT_59772 [Trichoplax adhaerens])

HSP 1 Score: 256.144 bits (653), Expect = 1.430e-78
Identity = 131/253 (51.78%), Postives = 175/253 (69.17%), Query Frame = 0

Query:    5 HLGEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVAGSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERETAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTLISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVRDWSHAHEYPLGAKGGESLLNKRLEVSAACRQAAVGRPTIHNHRCSSGL--FIAPFCG 255
            H G+ VQ+V +SE     + LN+ AL N+L+ + +++K V V+SVAG++R GKSFLL FFLRYL  + + +    W+G++D+ L GF WR G +RET GI LW KP   +L +GEEV VL+MDTQG FD +ST++D + IFALST+ISSVQIYNI +NIQED LQHL +FT+YGR+A +   +  K FQVLQFLVRDWS+ +EYP G KGG  LL +RLE+S   +   + +   H H C   L  F+ P  G
Sbjct:   37 HHGKPVQIV-ISESEH-SFRLNETALENILLQSDIQNKKVVVISVAGAYRKGKSFLLDFFLRYLERNND-KTTDDWLGKDDEVLTGFPWRGGSQRETTGILLWDKPFLCELPDGEEVVVLIMDTQGAFDKQSTIKDCAVIFALSTMISSVQIYNISQNIQEDHLQHLQIFTEYGRVALE--DNNCKPFQVLQFLVRDWSYPYEYPYGEKGGADLLKERLEISPE-QHEELRQLRQHIHSCYEQLNCFLMPHPG 283

The following BLAST results are available for this feature:

BLAST of HiSeq10399 vs. null

BLAST of HiSeq10399 vs. null
Analysis Date: 2017-08-29 (Blastp: Transcriptome 1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
PREDICTED:	3.813e-82	60.00	atlastin-like [Plutella xylostella]	[more]
PREDICTED:	2.655e-80	57.66	atlastin-like [Amyelois transitella]	[more]
PREDICTED:	3.745e-80	54.00	atlastin-2 [Strongylocentrotus purpuratus]	[more]
PREDICTED:	4.543e-79	57.73	atlastin-like isoform X4 [Aplysia californica]	[more]
PREDICTED:	6.441e-79	57.73	atlastin-like isoform X1 [Aplysia californica]	[more]
PREDICTED:	8.094e-79	56.36	atlastin-1-like isoform X3 [Biomphalaria glabrata]	[more]
PREDICTED:	8.489e-79	57.73	atlastin-like isoform X2 [Aplysia californica]	[more]
PREDICTED:	8.548e-79	57.73	atlastin-like isoform X3 [Aplysia californica]	[more]
PREDICTED:	1.003e-78	56.36	atlastin-1-like isoform X1 [Biomphalaria glabrata]	[more]
hypothetical	1.430e-78	51.78	protein TRIADDRAFT_59772 [Trichoplax adhaerens] >g...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0000166	nucleotide binding

InterPro

Analysis Name: InterProScan: Transcriptome 1.0
Date Performed: 2017-08-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..227 e-value: 9.7E-54 score: 182.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..224
IPR015894	Guanylate-binding protein, N-terminal	PFAM	PF02263	GBP	coord: 23..232 e-value: 6.6E-56 score: 189.1
None	No IPR available	PANTHER	PTHR10751	GUANYLATE BINDING PROTEIN	coord: 4..227
None	No IPR available	PANTHER	PTHR10751:SF29	ATLASTIN	coord: 4..227
IPR030386	GB1/RHD3-type guanine nucleotide-binding (G) domain	PROSITE	PS51715	G_GB1_RHD3	coord: 41..257 score: 47.403

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan: Transcriptome 1.0	2017-08-29
Blastp: Transcriptome 1.0 vs NR	2017-08-29
Blast2GO: Transcriptome 1.0	2017-08-29
Transcriptome denovo Assembly (v1.0) of Thaumetopoea pityocampa	2016-11-28

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
HiSeq10399	HiSeq10399	Thaumetopoea pityocampa	mRNA	?

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>HiSeq10399_p ID=HiSeq10399_p|Name=HiSeq10399|organism=Thaumetopoea pityocampa|type=polypeptide|length=257bp
MSGEHLGEAVQVVTVSEGGGPRYVLNKQALGNLLMTTGVRDKPVAVVSVA
GSFRGGKSFLLGFFLRYLNASREHQLNGQWMGREDDPLCGFKWRAGCERE
TAGIHLWSKPITVKLDNGEEVAVLLMDTQGTFDTESTLQDSSTIFALSTL
ISSVQIYNIFRNIQEDDLQHLHLFTDYGRLAADAGADGGKAFQVLQFLVR
DWSHAHEYPLGAKGGESLLNKRLEVSAACRQAAVGRPTIHNHRCSSGLFI
APFCGRG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR030386	G_GB1_RHD3_dom
IPR015894	Guanylate-bd_N
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane