HiSeq10880_p (polypeptide) Thaumetopoea pityocampa

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameHiSeq10880
Unique NameHiSeq10880_p
Typepolypeptide
OrganismThaumetopoea pityocampa (Pine processionary)
Sequence length276
Homology
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein [Amyelois transitella] >gi|913307167|ref|XP_013184054.1| PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein [Amyelois transitella])

HSP 1 Score: 508.064 bits (1307), Expect = 0.000e+0
Identity = 238/276 (86.23%), Postives = 258/276 (93.48%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RYWLCFASA+CL G+CGANYCRD+NLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDC+VSGWGPW+DCDT+CGSGSMVRSRRV+QA +HGGRHCPSL+QRRACQEH GCS DSD+P+RDETAMILPG LSVSRHSN+TVDIRKNLRLRNPDDPES++HREYC QFEV KVSKACHADSDYK LREG+TVC+LCE AALRRDL WRCSGHGV GHTTRFYALVAPHCHGKW+++    DK+S CC NPDFIFV
Sbjct:    1 MLRYWLCFASALCLAGHCGANYCRDSNLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCIVSGWGPWSDCDTSCGSGSMVRSRRVVQAPAHGGRHCPSLIQRRACQEHHGCSADSDIPLRDETAMILPGSLSVSRHSNETVDIRKNLRLRNPDDPESNAHREYCVQFEVAKVSKACHADSDYKALREGSTVCLLCEAAALRRDLKWRCSGHGVPGHTTRFYALVAPHCHGKWIRSERIMDKKSACCANPDFIFV 276          
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein-like [Bombyx mori])

HSP 1 Score: 495.738 bits (1275), Expect = 2.711e-176
Identity = 236/276 (85.51%), Postives = 256/276 (92.75%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M R++LC  S     GYC ANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVS WG W++CDT CGSGSMVR+RR++QA +HGGRHCPSLVQRRACQEH+GCS DSDVP+RDETAM+LPGGLSVSRHSN+TVDIRKNLRLRNPDDPES+SHREYCAQ+EVTKVSKACHADSDYK LREGNTVCVLCE+AALRRDL WRC+GHGV GHTTRFYALVAPHCHGKW+++ H+ DK SDCCTNPDFIFV
Sbjct:    1 MHRHFLCL-SLFIFAGYCDANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSSWGSWSECDTTCGSGSMVRTRRIVQAPAHGGRHCPSLVQRRACQEHQGCSSDSDVPLRDETAMLLPGGLSVSRHSNETVDIRKNLRLRNPDDPESNSHREYCAQYEVTKVSKACHADSDYKALREGNTVCVLCESAALRRDLKWRCNGHGVSGHTTRFYALVAPHCHGKWIRSDHDLDKTSDCCTNPDFIFV 275          
BLAST of HiSeq10880 vs. null
Match: RPE-spondin ([Papilio xuthus])

HSP 1 Score: 480.33 bits (1235), Expect = 3.950e-170
Identity = 223/276 (80.80%), Postives = 247/276 (89.49%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RYW+C ASAVCL G C AN CRDANLCCPGRDSSCVVQKAHQNAII+D++DKPCYCDHACLKLGDCCPDFRETCGV DCV+S WGPW++CDT CGSGSM RSRRV+QAA+ GGRHCP L+QRRACQ H  C+ DSD+P+R+E+AMILPG LSVSRHSNDTVDIRKNLRLRNPDDPES+SHREYC QFEV KVSKACH DSDYK LREG+TVCV+CETAALRRDL WRC+GHGV GH TRFYALVAPHCHGKW++   + DKR DCC++PDFIFV
Sbjct:    1 MLRYWICLASAVCLAGQCCANSCRDANLCCPGRDSSCVVQKAHQNAIIDDVSDKPCYCDHACLKLGDCCPDFRETCGVTDCVISEWGPWSECDTGCGSGSMQRSRRVLQAAARGGRHCPDLIQRRACQAHHACAPDSDIPLREESAMILPGSLSVSRHSNDTVDIRKNLRLRNPDDPESNSHREYCVQFEVLKVSKACHLDSDYKALREGDTVCVMCETAALRRDLKWRCAGHGVAGHATRFYALVAPHCHGKWLRTKQDLDKRGDCCSSPDFIFV 276          
BLAST of HiSeq10880 vs. null
Match: uncharacterized (protein LOC106117648 precursor [Papilio xuthus] >gi|389608475|dbj|BAM17847.1| similar to CG42339 [Papilio xuthus])

HSP 1 Score: 479.945 bits (1234), Expect = 4.312e-170
Identity = 223/276 (80.80%), Postives = 247/276 (89.49%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RYW+C ASAVCL G C AN CRDANLCCPGRDSSCVVQKAHQNAII+D++DKPCYCDHACLKLGDCCPDFRETCGV DCV+S WGPW++CDT CGSGSM RSRRV+QAA+ GGRHCP L+QRRACQ H  C+ DSD+P+R+E+AMILPG LSVSRHSNDTVDIRKNLRLRNPDDPES+SHREYC QFEV KVSKACH DSDYK LREG+TVCV+CETAALRRDL WRC+GHGV GH TRFYALVAPHCHGKW++   + DKR DCC++PDFIFV
Sbjct:    1 MLRYWICLASAVCLAGQCCANSCRDANLCCPGRDSSCVVQKAHQNAIIDDVSDKPCYCDHACLKLGDCCPDFRETCGVTDCVISEWGPWSECDTGCGSGSMQRSRRVLQAAARGGRHCPDLIQRRACQAHHACAPDSDIPLREESAMILPGSLSVSRHSNDTVDIRKNLRLRNPDDPESNSHREYCVQFEVLKVSKACHLDSDYKALREGDTVCVMCETAALRRDLKWRCAGHGVTGHATRFYALVAPHCHGKWLRTKQDLDKRGDCCSSPDFIFV 276          
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein [Papilio polytes])

HSP 1 Score: 473.396 bits (1217), Expect = 2.113e-167
Identity = 221/276 (80.07%), Postives = 244/276 (88.41%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RYW+C ASAV L G C AN CRDANLCCPGRDSSCVVQKAHQNAII+D++DKPCYCDHACLKLGDCCPDFRETCGV DCV+S WGPW++CDT CGSGSM R+RRV+QAA+ GGRHCP L QRRACQ H  C+ DSD+P+R+E+AMILPG LSVSRHSNDTVDIRKNLRLRNPDDPES+SHREYC QFEV KVSKACH DS+YK LREG TVCV+CETAALRRDL WRC+GHGV GH TRFYALVAPHCHGKW++   + DKR DCC+NPDFIFV
Sbjct:    1 MLRYWICLASAVYLAGQCCANSCRDANLCCPGRDSSCVVQKAHQNAIIDDVSDKPCYCDHACLKLGDCCPDFRETCGVTDCVISEWGPWSECDTGCGSGSMQRTRRVLQAAARGGRHCPELQQRRACQAHHDCAPDSDIPLREESAMILPGSLSVSRHSNDTVDIRKNLRLRNPDDPESNSHREYCVQFEVLKVSKACHLDSEYKSLREGGTVCVMCETAALRRDLKWRCAGHGVAGHATRFYALVAPHCHGKWLRTKQDLDKRGDCCSNPDFIFV 276          
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein [Plutella xylostella])

HSP 1 Score: 455.677 bits (1171), Expect = 1.721e-160
Identity = 216/276 (78.26%), Postives = 236/276 (85.51%), Query Frame = 0
Query:    1 MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RYWLCFASAVCL G+CGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDF+ TCGV+DCVVS W  W++CD++CG+GSMVR+RRV QAA HGGR CP+L+QRRAC +HRGC E SD+P R+E A ILPG LSVSRHSN+TVDIRKNLRLRNPDDPES+SHREYC QFEV K SKACH DSDYK LREG  V VLCETAAL+R L WRC GHGV GH TRF ALVAPHCHGKW +  H P +  + C  PDFIFV
Sbjct:    1 MLRYWLCFASAVCLAGHCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFKATCGVVDCVVSSWSEWSECDSDCGAGSMVRTRRVAQAAEHGGRRCPALLQRRACHDHRGCRERSDLPRREEMAQILPGALSVSRHSNETVDIRKNLRLRNPDDPESNSHREYCIQFEVIKSSKACHLDSDYKALREGGKVSVLCETAALKRGLEWRCEGHGVAGHATRFSALVAPHCHGKWTRVQHVP-RDGEPCRTPDFIFV 275          
BLAST of HiSeq10880 vs. null
Match: hypothetical (protein KGM_15432 [Danaus plexippus])

HSP 1 Score: 368.622 bits (945), Expect = 6.290e-127
Identity = 167/214 (78.04%), Postives = 193/214 (90.19%), Query Frame = 0
Query:   63 LKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            +KLGDCCPDFRETCGV+DCVVSGWG W++CD  CGSGSM+RSRRV+QA + GG+HCP+LVQRRACQ H GC+E+SD+P+R+E+AMILPG LS+SRHS+++VDIRKNLRLRNPDDPES+SHREYC Q+EVTKVSKACH DSDYK LREG TVCV+CETAALRRDL WRC GHGV GH TRFYALVAPHCHGKW++A++N DK S CC  PDFIFV
Sbjct:    1 MKLGDCCPDFRETCGVLDCVVSGWGEWSECDNECGSGSMMRSRRVVQAPARGGKHCPTLVQRRACQSHHGCTEESDIPLREESAMILPGSLSISRHSDESVDIRKNLRLRNPDDPESNSHREYCVQYEVTKVSKACHTDSDYKALREGATVCVMCETAALRRDLKWRCGGHGVSGHATRFYALVAPHCHGKWIRASNNADKNSGCCLKPDFIFV 214          
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein [Tribolium castaneum] >gi|1004399118|gb|KYB27054.1| Somatomedin-B and thrombospondin type-1 domain-containing protein-like protein [Tribolium castaneum])

HSP 1 Score: 314.309 bits (804), Expect = 1.383e-104
Identity = 161/281 (57.30%), Postives = 192/281 (68.33%), Query Frame = 0
Query:    8 FASAV-CLTGYCGAN-------YCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDD-PESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKR---SDCCTNPDFIFV 276
            FA+ V  L G+C  N        CR+A LCCPGRDSSCVVQKA  NAIIEDL+DKPCYCDHACLKLGDCCPDF+E CGV+DC V+ WGPW+ CD +CG GSM R+R +     +GGRHCPSL QRR CQ    C    D P   E AM+LPG LS SR +N T DIRKNLRLR+P+  P+    + YC +F++ K SKAC  + +Y  L+EG  VCV CE+ AL ++L WRC GHGV G TTRF AL APHCHGKW++A   PD+     +C     FIFV
Sbjct:    4 FATLVLVLVGFCMRNGQLVSGGSCREAKLCCPGRDSSCVVQKAPLNAIIEDLSDKPCYCDHACLKLGDCCPDFKEACGVVDCQVTSWGPWSPCDADCGPGSMSRTRSIKMQPQNGGRHCPSLEQRRGCQVST-CHHHPD-PAIKEIAMLLPGSLSHSRTANATSDIRKNLRLRDPEAYPQYDPEKTYCVEFQIVKASKACRKEPNYNALKEGERVCVRCESEALHQNLGWRCQGHGVEGRTTRFSALSAPHCHGKWLRAQAEPDRSCTAKNCEAEHAFIFV 282          
BLAST of HiSeq10880 vs. null
Match: hypothetical (protein OBRU01_20312, partial [Operophtera brumata])

HSP 1 Score: 298.13 bits (762), Expect = 7.600e-100
Identity = 144/176 (81.82%), Postives = 152/176 (86.36%), Query Frame = 0
Query:  101 MVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDKRSDCCTNPDFIFV 276
            M RSRRV+QAA+HGG+ CPSLVQRRACQEH GC  D       ETAM+LPGGLSVSRHSN+TVDIRKNLRLRNPDDPES+SHREYCAQFEVTKVSKACH DSDYK LREG  VCV CETAALRRDL WRCSGHGV GHTTRFYALVAPHCHGKWV++   PDKRSDCC  PDFIFV
Sbjct:    1 MARSRRVVQAAAHGGKRCPSLVQRRACQEHLGCDADK------ETAMLLPGGLSVSRHSNETVDIRKNLRLRNPDDPESNSHREYCAQFEVTKVSKACHTDSDYKALREGANVCVKCETAALRRDLKWRCSGHGVAGHTTRFYALVAPHCHGKWVRSQETPDKRSDCCMKPDFIFV 170          
BLAST of HiSeq10880 vs. null
Match: PREDICTED: (somatomedin-B and thrombospondin type-1 domain-containing protein [Dendroctonus ponderosae] >gi|332373404|gb|AEE61843.1| unknown [Dendroctonus ponderosae])

HSP 1 Score: 301.212 bits (770), Expect = 2.574e-99
Identity = 154/275 (56.00%), Postives = 186/275 (67.64%), Query Frame = 0
Query:    7 CFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIEDLTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGSMVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILPGGLSVSRHSNDTVDIRKNLRLRNP-DDPESHSHREYCAQFEVTKVSKACHADSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHCHGKWVKATHNPDK----RSDCCTNPDFIFV 276
            C    + L G      CR+A LCC GRDSSCVVQKA  NAIIEDL+DKPCYCDHACLKLGDCC DF++ CGV+DC V+ WGPWT CD +CG G+M RSR +     +GGRHC SL QRR CQ    C    D P   E AM+LPG LS SR +N T DIRKNLR+R+P ++P+    + YC +FE+ K SKAC  + +YK L+EG  VCV CE+ AL  +L WRC GHGV G  TR+ AL APHCHGKW++A+  PD+    R+   T   FIFV
Sbjct:   12 CLVFFIYLCGVVFGGSCREAKLCCTGRDSSCVVQKAPVNAIIEDLSDKPCYCDHACLKLGDCCVDFKDACGVVDCEVTPWGPWTACDADCGPGTMSRSRSIRVQPQNGGRHCLSLEQRRGCQVS-NCHHHPD-PAIKEIAMLLPGSLSQSRTANATSDIRKNLRVRDPAENPQYDPKKTYCVEFEILKASKACRKEGNYKALKEGERVCVRCESEALHEELGWRCQGHGVEGRITRWSALSAPHCHGKWLRASAEPDRTCEDRTCKDTTTSFIFV 284          
The following BLAST results are available for this feature:
BLAST of HiSeq10880 vs. null
Analysis Date: 2017-08-29 (Blastp: Transcriptome 1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
PREDICTED:0.000e+086.23somatomedin-B and thrombospondin type-1 domain-con... [more]
PREDICTED:2.711e-17685.51somatomedin-B and thrombospondin type-1 domain-con... [more]
RPE-spondin3.950e-17080.80[Papilio xuthus][more]
uncharacterized4.312e-17080.80protein LOC106117648 precursor [Papilio xuthus] >g... [more]
PREDICTED:2.113e-16780.07somatomedin-B and thrombospondin type-1 domain-con... [more]
PREDICTED:1.721e-16078.26somatomedin-B and thrombospondin type-1 domain-con... [more]
hypothetical6.290e-12778.04protein KGM_15432 [Danaus plexippus][more]
PREDICTED:1.383e-10457.30somatomedin-B and thrombospondin type-1 domain-con... [more]
hypothetical7.600e-10081.82protein OBRU01_20312, partial [Operophtera brumata... [more]
PREDICTED:2.574e-9956.00somatomedin-B and thrombospondin type-1 domain-con... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006955 immune response
biological_process GO:0006898 receptor-mediated endocytosis
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0005044 scavenger receptor activity
InterPro
Analysis Name: InterProScan: Transcriptome 1.0
Date Performed: 2017-08-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 83..134
e-value: 1.2E-8
score: 44.8
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 84..133
e-value: 1.7E-8
score: 34.3
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 80..134
score: 11.362
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 79..127
NoneNo IPR availableGENE3D2.20.100.10coord: 79..128
e-value: 6.3E-13
score: 47.9
NoneNo IPR availablePANTHERPTHR20920RPE-SPONDINcoord: 1..276
NoneNo IPR availablePANTHERPTHR20920:SF1PROTEIN R17.3coord: 1..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.733
NoneNo IPR availableSUPERFAMILY90188Somatomedin B domaincoord: 52..79
IPR001212Somatomedin B domainPFAMPF01033Somatomedin_Bcoord: 28..76
e-value: 4.1E-9
score: 36.1
IPR001212Somatomedin B domainPROSITEPS00524SMB_1coord: 56..76
IPR001212Somatomedin B domainPROSITEPS50958SMB_2coord: 33..80
score: 7.23

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: Transcriptome 1.02017-08-29
Blastp: Transcriptome 1.0 vs NR2017-08-29
Blast2GO: Transcriptome 1.02017-08-29
Transcriptome denovo Assembly (v1.0) of Thaumetopoea pityocampa2016-11-28
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
HiSeq10880HiSeq10880Thaumetopoea pityocampamRNA?


Sequences
The following sequences are available for this feature:

polypeptide sequence

>HiSeq10880_p ID=HiSeq10880_p|Name=HiSeq10880|organism=Thaumetopoea pityocampa|type=polypeptide|length=276bp
MFRYWLCFASAVCLTGYCGANYCRDANLCCPGRDSSCVVQKAHQNAIIED
LTDKPCYCDHACLKLGDCCPDFRETCGVIDCVVSGWGPWTDCDTNCGSGS
MVRSRRVMQAASHGGRHCPSLVQRRACQEHRGCSEDSDVPMRDETAMILP
GGLSVSRHSNDTVDIRKNLRLRNPDDPESHSHREYCAQFEVTKVSKACHA
DSDYKPLREGNTVCVLCETAALRRDLNWRCSGHGVVGHTTRFYALVAPHC
HGKWVKATHNPDKRSDCCTNPDFIFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001212Somatomedin_B_dom
IPR000884TSP1_rpt
Vocabulary: Biological Process
TermDefinition
GO:0006898receptor-mediated endocytosis
GO:0006955immune response
Vocabulary: Molecular Function
TermDefinition
GO:0005044scavenger receptor activity
GO:0030247polysaccharide binding