g77.t1 (mRNA) Venturia canescens

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Nameg77.t1
Unique Nameg77.t1
TypemRNA
OrganismVenturia canescens (vcanescens)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1contigscaffold_1:571007..572325 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Venturia canescens OGS 1.1 201901312019-01-31
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
g77g77Venturia canescensgenescaffold_1 571007..572325 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1g77.t1-PAVenturia canescenspolypeptidescaffold_1 571007..572325 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1-stop_codong77.t1-stop_codonVenturia canescensstop_codonscaffold_1 571007..571009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1-CDSg77.t1-CDS-2Venturia canescensCDSscaffold_1 571007..571737 -
g77.t1-CDSg77.t1-CDS-1Venturia canescensCDSscaffold_1 572001..572325 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1-exong77.t1-exon-2Venturia canescensexonscaffold_1 571007..571737 -
g77.t1-exong77.t1-exon-1Venturia canescensexonscaffold_1 572001..572325 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1-introng77.t1-intronVenturia canescensintronscaffold_1 571738..572000 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
g77.t1-start_codong77.t1-start_codonVenturia canescensstart_codonscaffold_1 572323..572325 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>g77.t1 ID=g77.t1|Name=g77.t1|organism=Venturia canescens|type=mRNA|length=1056bp|location=Sequence derived from alignment at scaffold_1:571007..572325- (Venturia canescens)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGAATTCGGGGATGAGTATCCGCATCGCGCTCGGCCTGCTCCTGCT
CGTTATTCGTCCGGCAAGAAACGAAGCAGCGAGGACTTCCGGCCGCGGGC
CCATCCAGGACGCGATTCAGAGCGGCGCAGCAGCCGAATACAACAAAGAC
GATTGCACTTGGAGGCGTGGAAACGATCGCGACTCCTGCCCGGACCCGGA
TGTCCACGTCTACCTCTATACTCCGGGTCGACCGAAACGCCCCCTCGACT
CCCGGCAATCCGACTGGCTCCGCAAGGACTACGAACCTACCCGAGAAAAT
ATTATTCTCATCCACGGCTACGCAGGCGGGGATGACACGCTCCCGATCTC
GGTGCTGCGCGACGCTTACATGAGAAACGGAAGTTACAACGTGTTCCTGG
TCGACTGGGGAGGCTTGAGCGCAGCGCCGTGTTATCCAGCCGCAGTGTCG
AATCTGCGGCCAGTCGCTCGTTGCTTGGCGGGGACATTGACGGTGCTGCG
TCACCTGGGCCTGCCGATCGGAAGGACGACTTGCGTGGGTCACTCCCTGG
GGGCGCACTTGTGCGGAATAATGGCGAATTATTTGCTCTTCCGAATGCAC
AGGATAGTCGGTTTGGACCCGGCGAGGCCGCTGGTCCGTCCGGGCCTGGT
GAACCGTTTGGACAGCGGGGACGCCGATTTCGTCGAGGTCATTCACACGA
ACGCCGGTTACTACGGGGAGATGGGTCGCGTCGGGCACGTCGACGTTTGC
GTAAACGGGGGAAAGCTCCAGCCCTTCTGCGAGAACAGGCCGAACGACCA
GCTGTGCAGTCACGTTTGGGCGGTTTGCTACATGGCGCAGAGCGTCGATG
GAGGCGACAGGAAGATGATGGCGGAGCCCTGCTCGAGGCGCTGCCCCTCC
GGACCCCGGATCAGCCCCCGAGCGGGCGAAGTCCTCCTCGTCGGGCAGCA
CACGCCTGACCACGCTCGAGGATCCTTTTGCTACACGAGCTACGATCCAC
CTTATTGTCCGAAGTACGACCCGGATGGACGTGGCGACGATAAGTGCTGC
TTGTAG
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protein sequence of g77.t1

>g77.t1-PA ID=g77.t1-PA|Name=g77.t1|organism=Venturia canescens|type=polypeptide|length=351bp
MSNSGMSIRIALGLLLLVIRPARNEAARTSGRGPIQDAIQSGAAAEYNKD
DCTWRRGNDRDSCPDPDVHVYLYTPGRPKRPLDSRQSDWLRKDYEPTREN
IILIHGYAGGDDTLPISVLRDAYMRNGSYNVFLVDWGGLSAAPCYPAAVS
NLRPVARCLAGTLTVLRHLGLPIGRTTCVGHSLGAHLCGIMANYLLFRMH
RIVGLDPARPLVRPGLVNRLDSGDADFVEVIHTNAGYYGEMGRVGHVDVC
VNGGKLQPFCENRPNDQLCSHVWAVCYMAQSVDGGDRKMMAEPCSRRCPS
GPRISPRAGEVLLVGQHTPDHARGSFCYTSYDPPYCPKYDPDGRGDDKCC
L
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mRNA from alignment at scaffold_1:571007..572325-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>g77.t1 ID=g77.t1|Name=g77.t1|organism=Venturia canescens|type=mRNA|length=1319bp|location=Sequence derived from alignment at scaffold_1:571007..572325- (Venturia canescens)
ATGTCGAATTCGGGGATGAGTATCCGCATCGCGCTCGGCCTGCTCCTGCT CGTTATTCGTCCGGCAAGAAACGAAGCAGCGAGGACTTCCGGCCGCGGGC CCATCCAGGACGCGATTCAGAGCGGCGCAGCAGCCGAATACAACAAAGAC GATTGCACTTGGAGGCGTGGAAACGATCGCGACTCCTGCCCGGACCCGGA TGTCCACGTCTACCTCTATACTCCGGGTCGACCGAAACGCCCCCTCGACT CCCGGCAATCCGACTGGCTCCGCAAGGACTACGAACCTACCCGAGAAAAT ATTATTCTCATCCACGGCTACGCAGGTGTGTTTTAACTCGTTATTTTCAA AAAAATCAATCCTTCATGATTTTGCGGATTTTGTGCATGCTGCCAAAATT TTGCTTCCGAGCCCACGTAGTCGTGACGCTGAACTTCGCAACGAAACGAC GTAAAAAAAAACTCTCCAACGAAATCCCAGTAATTCTCAAATTTCGTTTT TTCCCCAAAATTCAAATATTTCCTTAATTTCCCGACGAATTTGACGTTCC TCGGGATGGTTATTTGAAAAAACTGTGTACGATTCCAGGCGGGGATGACA CGCTCCCGATCTCGGTGCTGCGCGACGCTTACATGAGAAACGGAAGTTAC AACGTGTTCCTGGTCGACTGGGGAGGCTTGAGCGCAGCGCCGTGTTATCC AGCCGCAGTGTCGAATCTGCGGCCAGTCGCTCGTTGCTTGGCGGGGACAT TGACGGTGCTGCGTCACCTGGGCCTGCCGATCGGAAGGACGACTTGCGTG GGTCACTCCCTGGGGGCGCACTTGTGCGGAATAATGGCGAATTATTTGCT CTTCCGAATGCACAGGATAGTCGGTTTGGACCCGGCGAGGCCGCTGGTCC GTCCGGGCCTGGTGAACCGTTTGGACAGCGGGGACGCCGATTTCGTCGAG GTCATTCACACGAACGCCGGTTACTACGGGGAGATGGGTCGCGTCGGGCA CGTCGACGTTTGCGTAAACGGGGGAAAGCTCCAGCCCTTCTGCGAGAACA GGCCGAACGACCAGCTGTGCAGTCACGTTTGGGCGGTTTGCTACATGGCG CAGAGCGTCGATGGAGGCGACAGGAAGATGATGGCGGAGCCCTGCTCGAG GCGCTGCCCCTCCGGACCCCGGATCAGCCCCCGAGCGGGCGAAGTCCTCC TCGTCGGGCAGCACACGCCTGACCACGCTCGAGGATCCTTTTGCTACACG AGCTACGATCCACCTTATTGTCCGAAGTACGACCCGGATGGACGTGGCGA CGATAAGTGCTGCTTGTAG
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Coding sequence (CDS) from alignment at scaffold_1:571007..572325-

>g77.t1 ID=g77.t1|Name=g77.t1|organism=Venturia canescens|type=CDS|length=1056bp|location=Sequence derived from alignment at scaffold_1:571007..572325- (Venturia canescens)
ATGTCGAATTCGGGGATGAGTATCCGCATCGCGCTCGGCCTGCTCCTGCT
CGTTATTCGTCCGGCAAGAAACGAAGCAGCGAGGACTTCCGGCCGCGGGC
CCATCCAGGACGCGATTCAGAGCGGCGCAGCAGCCGAATACAACAAAGAC
GATTGCACTTGGAGGCGTGGAAACGATCGCGACTCCTGCCCGGACCCGGA
TGTCCACGTCTACCTCTATACTCCGGGTCGACCGAAACGCCCCCTCGACT
CCCGGCAATCCGACTGGCTCCGCAAGGACTACGAACCTACCCGAGAAAAT
ATTATTCTCATCCACGGCTACGCAGGCGGGGATGACACGCTCCCGATCTC
GGTGCTGCGCGACGCTTACATGAGAAACGGAAGTTACAACGTGTTCCTGG
TCGACTGGGGAGGCTTGAGCGCAGCGCCGTGTTATCCAGCCGCAGTGTCG
AATCTGCGGCCAGTCGCTCGTTGCTTGGCGGGGACATTGACGGTGCTGCG
TCACCTGGGCCTGCCGATCGGAAGGACGACTTGCGTGGGTCACTCCCTGG
GGGCGCACTTGTGCGGAATAATGGCGAATTATTTGCTCTTCCGAATGCAC
AGGATAGTCGGTTTGGACCCGGCGAGGCCGCTGGTCCGTCCGGGCCTGGT
GAACCGTTTGGACAGCGGGGACGCCGATTTCGTCGAGGTCATTCACACGA
ACGCCGGTTACTACGGGGAGATGGGTCGCGTCGGGCACGTCGACGTTTGC
GTAAACGGGGGAAAGCTCCAGCCCTTCTGCGAGAACAGGCCGAACGACCA
GCTGTGCAGTCACGTTTGGGCGGTTTGCTACATGGCGCAGAGCGTCGATG
GAGGCGACAGGAAGATGATGGCGGAGCCCTGCTCGAGGCGCTGCCCCTCC
GGACCCCGGATCAGCCCCCGAGCGGGCGAAGTCCTCCTCGTCGGGCAGCA
CACGCCTGACCACGCTCGAGGATCCTTTTGCTACACGAGCTACGATCCAC
CTTATTGTCCGAAGTACGACCCGGATGGACGTGGCGACGATAAGTGCTGC
TTGTAG
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