Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.13 |
QI | 307|1|0.66|1|1|1|3|0|191 |
eAED | 0.13 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
AE3000861 | AE3000861 | Aphidius ervi | gene | scaffold7 1035661..1036745 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AE3000861-RA:exon:623 | AE3000861-RA:exon:623 | Aphidius ervi | exon | scaffold7 1035661..1036084 + |
AE3000861-RA:exon:624 | AE3000861-RA:exon:624 | Aphidius ervi | exon | scaffold7 1036194..1036401 + |
AE3000861-RA:exon:625 | AE3000861-RA:exon:625 | Aphidius ervi | exon | scaffold7 1036495..1036745 + |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AE3000861-RA:five_prime_utr | AE3000861-RA:five_prime_utr | Aphidius ervi | five_prime_UTR | scaffold7 1035661..1035967 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AE3000861-RA:cds | AE3000861-RA:cds | Aphidius ervi | CDS | scaffold7 1036495..1036745 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >AE3000861-RA ID=AE3000861-RA|Name=AE3000861-RA|organism=Aphidius ervi|type=mRNA|length=883bp ATTTGTATTTTATTATACATATCCATTTTTTATATTTTTTTAAAGTATTA AACAAGTGTTGGTGATGAGTAACTAACGGTGTGGTTGAACAAAAAGTGAG TTGGCCATCATTGATGACCAACTCACTTCGTGTTAAGACATCGACCAAGT CACTTTATTTAATAGTCTCATATTATACCTGGCTAAGTAGTTAGTATTCA GTGCGAGAAACTTGATTTAAATTCAATTATTTTGCATCATTTCTACATAC ATTTTCACTTGAAATTTAAAATTAATAAATAAATCTGACGCAGATATATT TTGTACAATGGTACAAAAAATTTATGTTGTATTGAGTTTAATGATGGTGG CTACACTTGTGTTTCTTTGTTGGTACATTTTTGTGCCACGTCAAACTAAT GACAACAACTTCAACATTGCTGAGTTATCTGGTGAATGGTGGATGGTTGC TGGTATTTCCCCGGAACAAAAAATGGGATCGTGCATTCAATACAAAAACG AGATTAATTCAAGCACCGCTTGGATGCAGGCCAGTATAACAAGTGCAAGA AATGGTACAAGACAGACGTTGGATTTCAAAGGCAGTGTAAATGGTTCAAG TATGATTTTAACTTGTCCTCTCAAAGCTGGAGCTCGCTTTGAACACAAAA TTCTATCTCTGGATTCTAAATATGCTGTTATGCTTGCTTCTTTGATTTCA CCAAAAACTGGAGAAAATACACAAGGAAACAATTTTGCAATTGTTTTGTC TCGCAGTAGTGAAGTTATTTCAGACACACAATTTGAAATATTCAAGAAAC AACTTTCTGGATATTTTGACGATATGACACGTTATGTCAAAGTCGACAAT ACATGCAATAATAAACAAAATAAAATTGAGTGA back to topspliced messenger RNA >AE3000861-RA ID=AE3000861-RA|Name=AE3000861-RA|organism=Aphidius ervi|type=mRNA|length=883bp|location=Sequence derived from alignment at scaffold7:1035661..1036745+ (Aphidius ervi)|Notes=Excludes all bases but those of type(s): exon.
ATTTGTATTTTATTATACATATCCATTTTTTATATTTTTTTAAAGTATTA AACAAGTGTTGGTGATGAGTAACTAACGGTGTGGTTGAACAAAAAGTGAG TTGGCCATCATTGATGACCAACTCACTTCGTGTTAAGACATCGACCAAGT CACTTTATTTAATAGTCTCATATTATACCTGGCTAAGTAGTTAGTATTCA GTGCGAGAAACTTGATTTAAATTCAATTATTTTGCATCATTTCTACATAC ATTTTCACTTGAAATTTAAAATTAATAAATAAATCTGACGCAGATATATT TTGTACAATGGTACAAAAAATTTATGTTGTATTGAGTTTAATGATGGTGG CTACACTTGTGTTTCTTTGTTGGTACATTTTTGTGCCACGTCAAACTAAT GACAACAACTTCAACATTGCTGAGTTATCTGGTGAATGGTGGATGGTTGC TGGTATTTCCCCGGAACAAAAAATGGGATCGTGCATTCAATACAAAAACG AGATTAATTCAAGCACCGCTTGGATGCAGGCCAGTATAACAAGTGCAAGA AATGGTACAAGACAGACGTTGGATTTCAAAGGCAGTGTAAATGGTTCAAG TATGATTTTAACTTGTCCTCTCAAAGCTGGAGCTCGCTTTGAACACAAAA TTCTATCTCTGGATTCTAAATATGCTGTTATGCTTGCTTCTTTGATTTCA CCAAAAACTGGAGAAAATACACAAGGAAACAATTTTGCAATTGTTTTGTC TCGCAGTAGTGAAGTTATTTCAGACACACAATTTGAAATATTCAAGAAAC AACTTTCTGGATATTTTGACGATATGACACGTTATGTCAAAGTCGACAAT ACATGCAATAATAAACAAAATAAAATTGAGTGA back to topprotein sequence of AE3000861-RA >AE3000861-PA ID=AE3000861-PA|Name=AE3000861-RA|organism=Aphidius ervi|type=polypeptide|length=191bp
MVQKIYVVLSLMMVATLVFLCWYIFVPRQTNDNNFNIAELSGEWWMVAGI SPEQKMGSCIQYKNEINSSTAWMQASITSARNGTRQTLDFKGSVNGSSMI LTCPLKAGARFEHKILSLDSKYAVMLASLISPKTGENTQGNNFAIVLSRS SEVISDTQFEIFKKQLSGYFDDMTRYVKVDNTCNNKQNKIE back to topmRNA from alignment at scaffold7:1035661..1036745+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >AE3000861-RA ID=AE3000861-RA|Name=AE3000861-RA|organism=Aphidius ervi|type=mRNA|length=1085bp|location=Sequence derived from alignment at scaffold7:1035661..1036745+ (Aphidius ervi) ATTTGTATTTTATTATACATATCCATTTTTTATATTTTTTTAAAGTATTA
AACAAGTGTTGGTGATGAGTAACTAACGGTGTGGTTGAACAAAAAGTGAG
TTGGCCATCATTGATGACCAACTCACTTCGTGTTAAGACATCGACCAAGT
CACTTTATTTAATAGTCTCATATTATACCTGGCTAAGTAGTTAGTATTCA
GTGCGAGAAACTTGATTTAAATTCAATTATTTTGCATCATTTCTACATAC
ATTTTCACTTGAAATTTAAAATTAATAAATAAATCTGACGCAGATATATT
TTGTACAATGGTACAAAAAATTTATGTTGTATTGAGTTTAATGATGGTGG
CTACACTTGTGTTTCTTTGTTGGTACATTTTTGTGCCACGTCAAACTAAT
GACAACAACTTCAACATTGCTGAGGTATATTAAATTGAAAATTTATTCTA
AGTAATATTAAATAATTAAATAATTTTGTTGTTTTATTTTTTTATTGGTG
GGTTTTATTTTTTTTCCTTTTTTTTTTTTGCAGTTATCTGGTGAATGGTG
GATGGTTGCTGGTATTTCCCCGGAACAAAAAATGGGATCGTGCATTCAAT
ACAAAAACGAGATTAATTCAAGCACCGCTTGGATGCAGGCCAGTATAACA
AGTGCAAGAAATGGTACAAGACAGACGTTGGATTTCAAAGGCAGTGTAAA
TGGTTCAAGTATGATTTTAACTTGTCCTCTCAAAGCTGGAGGTAATTTAA
AAAATGAATAATAATATTTTAAAATATATAATAATCTTTTTAAATAATCA
AACTAGATAATAATATCATTATTATATTTTTAAGCTCGCTTTGAACACAA
AATTCTATCTCTGGATTCTAAATATGCTGTTATGCTTGCTTCTTTGATTT
CACCAAAAACTGGAGAAAATACACAAGGAAACAATTTTGCAATTGTTTTG
TCTCGCAGTAGTGAAGTTATTTCAGACACACAATTTGAAATATTCAAGAA
ACAACTTTCTGGATATTTTGACGATATGACACGTTATGTCAAAGTCGACA
ATACATGCAATAATAAACAAAATAAAATTGAGTGA back to topCoding sequence (CDS) from alignment at scaffold7:1035661..1036745+ >AE3000861-RA ID=AE3000861-RA|Name=AE3000861-RA|organism=Aphidius ervi|type=CDS|length=576bp|location=Sequence derived from alignment at scaffold7:1035661..1036745+ (Aphidius ervi) ATGGTACAAAAAATTTATGTTGTATTGAGTTTAATGATGGTGGCTACACT TGTGTTTCTTTGTTGGTACATTTTTGTGCCACGTCAAACTAATGACAACA ACTTCAACATTGCTGAGTTATCTGGTGAATGGTGGATGGTTGCTGGTATT TCCCCGGAACAAAAAATGGGATCGTGCATTCAATACAAAAACGAGATTAA TTCAAGCACCGCTTGGATGCAGGCCAGTATAACAAGTGCAAGAAATGGTA CAAGACAGACGTTGGATTTCAAAGGCAGTGTAAATGGTTCAAGTATGATT TTAACTTGTCCTCTCAAAGCTGGAGCTCGCTTTGAACACAAAATTCTATC TCTGGATTCTAAATATGCTGTTATGCTTGCTTCTTTGATTTCACCAAAAA CTGGAGAAAATACACAAGGAAACAATTTTGCAATTGTTTTGTCTCGCAGT AGTGAAGTTATTTCAGACACACAATTTGAAATATTCAAGAAACAACTTTC TGGATATTTTGACGATATGACACGTTATGTCAAAGTCGACAATACATGCA ATAATAAACAAAATAAAATTGAGTGA back to top
Synonyms
The feature 'AE3000861-RA' has the following synonyms
Synonym |
maker-scaffold7-augustus-gene-10.75-mRNA-1 |
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