Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Cds size | 1080 |
| Full name | GSCOCG00002892001 |
| Start | 1 |
| Stop | 1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00002892001 | GSCOCG00002892001 | Cotesia congregata | gene | scaffold_10 2059082..2061457 + |
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00002892001-RA-UTR | GSCOCG00002892001-RA-UTR-1 | Cotesia congregata | UTR | scaffold_10 2059082..2059618 + |
| GSCOCG00002892001-RA-UTR | GSCOCG00002892001-RA-UTR-2 | Cotesia congregata | UTR | scaffold_10 2061351..2061457 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00002892001-RA-exon | GSCOCG00002892001-RA-exon-1 | Cotesia congregata | exon | scaffold_10 2059082..2059667 + |
| GSCOCG00002892001-RA-exon | GSCOCG00002892001-RA-exon-2 | Cotesia congregata | exon | scaffold_10 2060320..2061457 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00002892001-RA-CDS | GSCOCG00002892001-RA-CDS-1 | Cotesia congregata | CDS | scaffold_10 2059619..2059667 + |
| GSCOCG00002892001-RA-CDS | GSCOCG00002892001-RA-CDS-2 | Cotesia congregata | CDS | scaffold_10 2060320..2061350 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >GSCOCG00002892001-RA ID=GSCOCG00002892001-RA|Name=GSCOCG00002892001-RA|organism=Cotesia congregata|type=mRNA|length=1724bp|location=Sequence derived from alignment at scaffold_10:2059082..2061457+ (Cotesia congregata)|Notes=Excludes all bases but those of type(s): exon.
GCACTCTCAGAGCAACGAGGGTGAGTAATACACTTAATACACTTTAAACA
CTTTATAAACTACATACACTTTTACACTATCGAATGATCCTCATCTACTG
TGCAGATGACTAATAAATATGTCAGTATGTGTGTCAATTTTTAAATGTGT
GTATTTGTCATGTGACAGCAGGTGGCGCTACTGCGGGAGAATTTAAAATT
TTTTTAATTTCTGAACTAATTTCACTACTGTTTTTTTGTCTGTCAATTAT
TTGCAATTATTTTTATTGAAAATTAATTAAAAAATTAATTTTTTATATTC
TTGATAAAGTTATGAAGGTTATAAAAATGTTTAATATAAGTGTGGTAATG
TGGAGGTGGTCAACAAGATTGTAAACAAAATACATAACCTATAAATCACT
CCAAAATTAAGAATGCACCACGTTGGTTTATTTAGTCTGCTAATTTTTAT
GTGATTAATTAGGATTTTTTATAAATAATTAAAGGTGATAATTTAGAATT
TAAATGATGCAGATTGTTTGATAAAAATATAAAAACTATGAGTGATTTTG
CTAAATCGCAGCTTGAGAAGTTTGGTTGGGTTGCAGGTAAAGGTTTAGGA
AAAAATGAAGATGGAATGACAGAAGCCCTGCGACCAAAATTAAAATTCGA
CACCAGTGGAATAGGCCATAGAGACACGTCTGGGAACCAATGGTGGAATT
CAGTTTACAACCAAGCATTGAATAACATCAACGTTGACAGTTCATCAGAA
AACAAGCCAGTCTTTAAAGTAACTAAGAGCAACGCGGTTGAAATAGCTGC
TGCAAAGCTTAATATAAACATAGGAAATTCCAAAAAATCTAAGGACGGCT
TAGTATACGGAAATTTTGTAAAAACTTCTACGTTAGAAGGGTCCAAAGAA
GTCCAGAGTGCTTCCCAAAAAAAGCTGAGTGCCAAGAAAGATGATCCGGT
GATGTTCAAGGACTTTATTGTCGACGATGATAAATTATTCAAGGCGTGTG
GCGGCAGGACTGCACACAAGGGTGCTCGGCATGGTCTCAAGCTCAGTGGA
AAGTTGGCCAGGATTCAACAGCAGGAGCTGTATTTTGCCAATCTTGCGGA
AGTTAAAAGTGGCAAGAAGAGAGCACATATTGGCTGTACTGCTAATGGTC
TTGTTGTTAAGGAAAAACCTCCAGAGCTTGTTGATGATGCATTAGACAAT
AAATTGAACGATGAAGATGATCAGTACAAATCTGTGTCGAAGAAAAGTAG
CAGAAAATTAAAGCGCAAACTAGAAGATTTGAGCCATAAATTATCCAGCT
CACTTTGTCTTGAAGAGACAAATGATAATGGTAAAAAAAATAAAAATAAA
ATACATGTGGAGCCTCAATGTTCTGAGAAAGATGCTGATGTTGGTTTCAA
AAGGAAAAAGAAGAAGAAGAAAGAGAAAAAGGAAATTATTGACTGTGAAT
TTCTGAATCATAAAATTGAAAAGAAGAAAAAAAAGAAACATAAGAAAAAA
GAGAAAGCTAAGCTGGAATTGGTCTCTAAGAATTTAACAAACTTTGATGA
AATTGTTAATAATGTATCTGAGAGTTTGGTTAAAGTTAAAATTGATAAAA
AGAAAACTAAAAAATAAATTATTGTTATTTTTGTACTGGTAATTTATTTA
ATAGAAAAATTTTTATAAATAAATTTTCAGCATTTTTTCAATATAAATAA
AGCATATTTATTTACCAACAAATA back to topprotein sequence of GSCOCG00002892001-RA >GSCOCG00002892001-PA ID=GSCOCG00002892001-PA|Name=GSCOCG00002892001-RA|organism=Cotesia congregata|type=polypeptide|length=360bp
MSDFAKSQLEKFGWVAGKGLGKNEDGMTEALRPKLKFDTSGIGHRDTSGN
QWWNSVYNQALNNINVDSSSENKPVFKVTKSNAVEIAAAKLNINIGNSKK
SKDGLVYGNFVKTSTLEGSKEVQSASQKKLSAKKDDPVMFKDFIVDDDKL
FKACGGRTAHKGARHGLKLSGKLARIQQQELYFANLAEVKSGKKRAHIGC
TANGLVVKEKPPELVDDALDNKLNDEDDQYKSVSKKSSRKLKRKLEDLSH
KLSSSLCLEETNDNGKKNKNKIHVEPQCSEKDADVGFKRKKKKKKEKKEI
IDCEFLNHKIEKKKKKKHKKKEKAKLELVSKNLTNFDEIVNNVSESLVKV
KIDKKKTKK. back to topmRNA from alignment at scaffold_10:2059082..2061457+ Legend: UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >GSCOCG00002892001-RA ID=GSCOCG00002892001-RA|Name=GSCOCG00002892001-RA|organism=Cotesia congregata|type=mRNA|length=2376bp|location=Sequence derived from alignment at scaffold_10:2059082..2061457+ (Cotesia congregata)
GCACTCTCAGAGCAACGAGGGTGAGTAATACACTTAATACACTTTAAACA
CTTTATAAACTACATACACTTTTACACTATCGAATGATCCTCATCTACTG
TGCAGATGACTAATAAATATGTCAGTATGTGTGTCAATTTTTAAATGTGT
GTATTTGTCATGTGACAGCAGGTGGCGCTACTGCGGGAGAATTTAAAATT
TTTTTAATTTCTGAACTAATTTCACTACTGTTTTTTTGTCTGTCAATTAT
TTGCAATTATTTTTATTGAAAATTAATTAAAAAATTAATTTTTTATATTC
TTGATAAAGTTATGAAGGTTATAAAAATGTTTAATATAAGTGTGGTAATG
TGGAGGTGGTCAACAAGATTGTAAACAAAATACATAACCTATAAATCACT
CCAAAATTAAGAATGCACCACGTTGGTTTATTTAGTCTGCTAATTTTTAT
GTGATTAATTAGGATTTTTTATAAATAATTAAAGGTGATAATTTAGAATT
TAAATGATGCAGATTGTTTGATAAAAATATAAAAACTATGAGTGATTTTG
CTAAATCGCAGCTTGAGAAGTTTGGTTGGGTTGCAGGTAATTATTTTATT
TATTTAATTTATCAAAACATATTTTAAGGTTATTTTATTTACTAATTTTT
TATAAATTAAATACTGAATTGTTAATGAATAATTTATTTTTATGACACTG
AAATTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAGATTCT
AGAAAAACATTTTTAAAATTGCATTTTAAAATCAATTTTTTTTTGTAAAT
AATTTATTAAATAAATTAAAATAAATTATTAGACGTCTCATTAAATTTCA
ATAACACTTAAATTAGCCAACGTTTTTAATTTTTTGATTTGTTGTAGTTA
TTAAATTAAAACTAAAAAATATTTTTTAAAAATGAAAATTTTTTTTTATT
ATTTTGCAATAATTTTTTTAATAAAAAAAAAGTTTTAAAAATTTTTAAAT
AACAGCTAACTTAATTTTCATAGTCGACAGACATTAGAAATTTTTTTAGA
ATCTTATAACAATTAAATAGTTATGAAATAAATTTAATAAAAAATTTCCA
CATGTTAAGATTAAAGAAAATTATGAGTGAAAATTTTTAGAAGCACTTTT
AGTGTTGTAAGAATTTAAAAAATTGACAATTGTCAGCTAACCAGTATATT
TAATTTTATTAAAAATAAATAAATATTTTTTTTACCAGGTAAAGGTTTAG
GAAAAAATGAAGATGGAATGACAGAAGCCCTGCGACCAAAATTAAAATTC
GACACCAGTGGAATAGGCCATAGAGACACGTCTGGGAACCAATGGTGGAA
TTCAGTTTACAACCAAGCATTGAATAACATCAACGTTGACAGTTCATCAG
AAAACAAGCCAGTCTTTAAAGTAACTAAGAGCAACGCGGTTGAAATAGCT
GCTGCAAAGCTTAATATAAACATAGGAAATTCCAAAAAATCTAAGGACGG
CTTAGTATACGGAAATTTTGTAAAAACTTCTACGTTAGAAGGGTCCAAAG
AAGTCCAGAGTGCTTCCCAAAAAAAGCTGAGTGCCAAGAAAGATGATCCG
GTGATGTTCAAGGACTTTATTGTCGACGATGATAAATTATTCAAGGCGTG
TGGCGGCAGGACTGCACACAAGGGTGCTCGGCATGGTCTCAAGCTCAGTG
GAAAGTTGGCCAGGATTCAACAGCAGGAGCTGTATTTTGCCAATCTTGCG
GAAGTTAAAAGTGGCAAGAAGAGAGCACATATTGGCTGTACTGCTAATGG
TCTTGTTGTTAAGGAAAAACCTCCAGAGCTTGTTGATGATGCATTAGACA
ATAAATTGAACGATGAAGATGATCAGTACAAATCTGTGTCGAAGAAAAGT
AGCAGAAAATTAAAGCGCAAACTAGAAGATTTGAGCCATAAATTATCCAG
CTCACTTTGTCTTGAAGAGACAAATGATAATGGTAAAAAAAATAAAAATA
AAATACATGTGGAGCCTCAATGTTCTGAGAAAGATGCTGATGTTGGTTTC
AAAAGGAAAAAGAAGAAGAAGAAAGAGAAAAAGGAAATTATTGACTGTGA
ATTTCTGAATCATAAAATTGAAAAGAAGAAAAAAAAGAAACATAAGAAAA
AAGAGAAAGCTAAGCTGGAATTGGTCTCTAAGAATTTAACAAACTTTGAT
GAAATTGTTAATAATGTATCTGAGAGTTTGGTTAAAGTTAAAATTGATAA
AAAGAAAACTAAAAAATAAATTATTGTTATTTTTGTACTGGTAATTTATT
TAATAGAAAAATTTTTATAAATAAATTTTCAGCATTTTTTCAATATAAAT
AAAGCATATTTATTTACCAACAAATA back to topCoding sequence (CDS) from alignment at scaffold_10:2059082..2061457+ >GSCOCG00002892001-RA ID=GSCOCG00002892001-RA|Name=GSCOCG00002892001-RA|organism=Cotesia congregata|type=CDS|length=1080bp|location=Sequence derived from alignment at scaffold_10:2059082..2061457+ (Cotesia congregata)
ATGAGTGATTTTGCTAAATCGCAGCTTGAGAAGTTTGGTTGGGTTGCAGG
TAAAGGTTTAGGAAAAAATGAAGATGGAATGACAGAAGCCCTGCGACCAA
AATTAAAATTCGACACCAGTGGAATAGGCCATAGAGACACGTCTGGGAAC
CAATGGTGGAATTCAGTTTACAACCAAGCATTGAATAACATCAACGTTGA
CAGTTCATCAGAAAACAAGCCAGTCTTTAAAGTAACTAAGAGCAACGCGG
TTGAAATAGCTGCTGCAAAGCTTAATATAAACATAGGAAATTCCAAAAAA
TCTAAGGACGGCTTAGTATACGGAAATTTTGTAAAAACTTCTACGTTAGA
AGGGTCCAAAGAAGTCCAGAGTGCTTCCCAAAAAAAGCTGAGTGCCAAGA
AAGATGATCCGGTGATGTTCAAGGACTTTATTGTCGACGATGATAAATTA
TTCAAGGCGTGTGGCGGCAGGACTGCACACAAGGGTGCTCGGCATGGTCT
CAAGCTCAGTGGAAAGTTGGCCAGGATTCAACAGCAGGAGCTGTATTTTG
CCAATCTTGCGGAAGTTAAAAGTGGCAAGAAGAGAGCACATATTGGCTGT
ACTGCTAATGGTCTTGTTGTTAAGGAAAAACCTCCAGAGCTTGTTGATGA
TGCATTAGACAATAAATTGAACGATGAAGATGATCAGTACAAATCTGTGT
CGAAGAAAAGTAGCAGAAAATTAAAGCGCAAACTAGAAGATTTGAGCCAT
AAATTATCCAGCTCACTTTGTCTTGAAGAGACAAATGATAATGGTAAAAA
AAATAAAAATAAAATACATGTGGAGCCTCAATGTTCTGAGAAAGATGCTG
ATGTTGGTTTCAAAAGGAAAAAGAAGAAGAAGAAAGAGAAAAAGGAAATT
ATTGACTGTGAATTTCTGAATCATAAAATTGAAAAGAAGAAAAAAAAGAA
ACATAAGAAAAAAGAGAAAGCTAAGCTGGAATTGGTCTCTAAGAATTTAA
CAAACTTTGATGAAATTGTTAATAATGTATCTGAGAGTTTGGTTAAAGTT
AAAATTGATAAAAAGAAAACTAAAAAATAA back to top
Synonyms
The feature 'GSCOCG00002892001-RA' has the following synonyms
| Synonym |
|---|
| GSCOCG00002892001 |
| GSCOCG00002892001-PA |
|