Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Cds size | 321 |
Full name | GSCOCG00009683001 |
Start | 1 |
Stop | 1 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
GSCOCG00009683001 | GSCOCG00009683001 | Cotesia congregata | gene | scaffold_100 122164..122945 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
GSCOCG00009683001-RA-exon | GSCOCG00009683001-RA-exon-2 | Cotesia congregata | exon | scaffold_100 122328..122484 - |
GSCOCG00009683001-RA-exon | GSCOCG00009683001-RA-exon-3 | Cotesia congregata | exon | scaffold_100 122164..122272 - |
GSCOCG00009683001-RA-exon | GSCOCG00009683001-RA-exon-1 | Cotesia congregata | exon | scaffold_100 122505..122945 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
GSCOCG00009683001-RA-UTR | GSCOCG00009683001-RA-UTR-1 | Cotesia congregata | UTR | scaffold_100 122785..122945 - |
GSCOCG00009683001-RA-UTR | GSCOCG00009683001-RA-UTR-2 | Cotesia congregata | UTR | scaffold_100 122328..122443 - |
GSCOCG00009683001-RA-UTR | GSCOCG00009683001-RA-UTR-3 | Cotesia congregata | UTR | scaffold_100 122164..122272 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
GSCOCG00009683001-RA-CDS | GSCOCG00009683001-RA-CDS-1 | Cotesia congregata | CDS | scaffold_100 122505..122784 - |
GSCOCG00009683001-RA-CDS | GSCOCG00009683001-RA-CDS-2 | Cotesia congregata | CDS | scaffold_100 122444..122484 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >GSCOCG00009683001-RA ID=GSCOCG00009683001-RA|Name=GSCOCG00009683001-RA|organism=Cotesia congregata|type=mRNA|length=707bp|location=Sequence derived from alignment at scaffold_100:122164..122945- (Cotesia congregata)|Notes=Excludes all bases but those of type(s): exon.
TGAACACTACTGTTGATTCTGGCAATTCTAGTGCCTTGAAGAGTCCTGAC AAGAATCTGACGCTGTTCTACCCAAAGGATGGGTCCTCTAGAAGAAAGCT TGATGATAAGGTTCCTAGTTTAGATATCAAGACGGCTTCAAGTGACTACT ACTTGTCAGTGATGAAACTAATCGAGAAACTCCTGGAAGCAATTGCACCG GTAATAGAGTACAATCAACAGAGCATGATACAGCAGCTAGTTAACGAGTC TGCGGTTATGGACGACCAGAAAAAAATTTCCGTGATCACTGTTTTGCAGA GATTAAGAGACGAACGGCAAAGTTACGTTAATATAATAAACAAAACAAGA GAGTTGATCGGAAAAGCTCAGCCGGTTGTTCCTTCGGTGCTGATTGATGA ATTGATTGATAAGTTGGCGGAGAATATCAGCTCCAGGAGACTCGACCGTG GAAATTATCGCCGTTCCTGCAGATTATCCTGATAATGAAACGGAATTCTT TTTGGTGGATTACGGAGAGCCTATTTCGGACATCAAGGTCAACCAATCTA TACCGAGGATTGTTGTAAGGATTGAAAACAATCTTGAACCCAAGCCAAGA ATTGGGACTGTCAAGGTTGACTATGGACAGGGAAATTCTTCAGGATTTTT GAGACTCAAAGACGATTATTACACTGAGGATGGGGTTTATGATACGGCGA ATCGGGG back to topprotein sequence of GSCOCG00009683001-RA >GSCOCG00009683001-PA ID=GSCOCG00009683001-PA|Name=GSCOCG00009683001-RA|organism=Cotesia congregata|type=polypeptide|length=107bp
MKLIEKLLEAIAPVIEYNQQSMIQQLVNESAVMDDQKKISVITVLQRLRD ERQSYVNIINKTRELIGKAQPVVPSVLIDELIDKLAENISSRRLDRGNYR RSCRLS. back to topmRNA from alignment at scaffold_100:122164..122945- Legend: exonUTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >GSCOCG00009683001-RA ID=GSCOCG00009683001-RA|Name=GSCOCG00009683001-RA|organism=Cotesia congregata|type=mRNA|length=782bp|location=Sequence derived from alignment at scaffold_100:122164..122945- (Cotesia congregata) TGAACACTACTGTTGATTCTGGCAATTCTAGTGCCTTGAAGAGTCCTGAC
AAGAATCTGACGCTGTTCTACCCAAAGGATGGGTCCTCTAGAAGAAAGCT
TGATGATAAGGTTCCTAGTTTAGATATCAAGACGGCTTCAAGTGACTACT
ACTTGTCAGTGATGAAACTAATCGAGAAACTCCTGGAAGCAATTGCACCG
GTAATAGAGTACAATCAACAGAGCATGATACAGCAGCTAGTTAACGAGTC
TGCGGTTATGGACGACCAGAAAAAAATTTCCGTGATCACTGTTTTGCAGA
GATTAAGAGACGAACGGCAAAGTTACGTTAATATAATAAACAAAACAAGA
GAGTTGATCGGAAAAGCTCAGCCGGTTGTTCCTTCGGTGCTGATTGATGA
ATTGATTGATAAGTTGGCGGAGAATATCAGCTCCAGGAGACAATTTTCAG
GGTCTGATAATTCGACCGTGGAAATTATCGCCGTTCCTGCAGATTATCCT
GATAATGAAACGGAATTCTTTTTGGTGGATTACGGAGAGCCTATTTCGGA
CATCAAGGTCAACCAATCTATACCGAGGATTGTTGTAAGGATTGAAAACA
ATCTTGAACCCAAGCCAAGTAAGTTTTGAGGTGGTTTTGGGGAGTTTTGG
GTGTTCAATAAGGTTTTTTGCAGGAATTGGGACTGTCAAGGTTGACTATG
GACAGGGAAATTCTTCAGGATTTTTGAGACTCAAAGACGATTATTACACT
GAGGATGGGGTTTATGATACGGCGAATCGGGG back to topCoding sequence (CDS) from alignment at scaffold_100:122164..122945- >GSCOCG00009683001-RA ID=GSCOCG00009683001-RA|Name=GSCOCG00009683001-RA|organism=Cotesia congregata|type=CDS|length=321bp|location=Sequence derived from alignment at scaffold_100:122164..122945- (Cotesia congregata) ATGAAACTAATCGAGAAACTCCTGGAAGCAATTGCACCGGTAATAGAGTA CAATCAACAGAGCATGATACAGCAGCTAGTTAACGAGTCTGCGGTTATGG ACGACCAGAAAAAAATTTCCGTGATCACTGTTTTGCAGAGATTAAGAGAC GAACGGCAAAGTTACGTTAATATAATAAACAAAACAAGAGAGTTGATCGG AAAAGCTCAGCCGGTTGTTCCTTCGGTGCTGATTGATGAATTGATTGATA AGTTGGCGGAGAATATCAGCTCCAGGAGACTCGACCGTGGAAATTATCGC CGTTCCTGCAGATTATCCTGA back to top
Synonyms
The feature 'GSCOCG00009683001-RA' has the following synonyms
Synonym |
GSCOCG00009683001 |
GSCOCG00009683001-PA |
|