Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Cds size | 462 |
| Full name | GSCOCG00009694001 |
| Start | 1 |
| Stop | 1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00009694001 | GSCOCG00009694001 | Cotesia congregata | gene | scaffold_100 170653..174139 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00009694001-RA-exon | GSCOCG00009694001-RA-exon-2 | Cotesia congregata | exon | scaffold_100 172967..173307 - |
| GSCOCG00009694001-RA-exon | GSCOCG00009694001-RA-exon-1 | Cotesia congregata | exon | scaffold_100 173990..174139 - |
| GSCOCG00009694001-RA-exon | GSCOCG00009694001-RA-exon-3 | Cotesia congregata | exon | scaffold_100 170653..170816 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00009694001-RA-UTR | GSCOCG00009694001-RA-UTR-1 | Cotesia congregata | UTR | scaffold_100 173990..174139 - |
| GSCOCG00009694001-RA-UTR | GSCOCG00009694001-RA-UTR-2 | Cotesia congregata | UTR | scaffold_100 170653..170695 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| GSCOCG00009694001-RA-CDS | GSCOCG00009694001-RA-CDS-1 | Cotesia congregata | CDS | scaffold_100 172967..173307 - |
| GSCOCG00009694001-RA-CDS | GSCOCG00009694001-RA-CDS-2 | Cotesia congregata | CDS | scaffold_100 170696..170816 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >GSCOCG00009694001-RA ID=GSCOCG00009694001-RA|Name=GSCOCG00009694001-RA|organism=Cotesia congregata|type=mRNA|length=655bp|location=Sequence derived from alignment at scaffold_100:170653..174139- (Cotesia congregata)|Notes=Excludes all bases but those of type(s): exon.
AGGTGCTCAAAGTTTTTGGAAAGGAGTTTATTAATCTGCTGCAATGTAAG
TATGTCAGAATAATAAATGTTTTTTTTTTGTTGTCAATTTTGTGTTTATT
TGGACAAAAATATTTTTTGGTAAATAAAAGTGGAAAATTTTTTTTTGGAG
ATGGATAAATCACCTGAAGAAAAGCCGAAAAAAAGAAAACGGAGTTCTAG
TTCAAGTTCAGGTTCAGATTCCGAGAAAGAAAAGCGAAAGAGAAAGAAGC
AGTATAAGAAGGACAAAAGGAAGATAAAGAAAAAGATGAAAAAGCTTAAG
AAAAAACTGAAAAGAAAGGAAAAAGAAGTAATTAAAGACGCCGAGGAGCA
GTTGGAGGTGATTGAGGACAACAAGTCCGATCAAGAGGATAAGACTGAGG
TGAGATCTATGGCGCCTATGACAAAGGAAGAATGGGAGAAAAGGCAGAGT
GTTGTTAGGAGGGTTCTTGACGAATCTACTGGAAGATACAGGTTAATTAA
AGGAGACGGTGAAGTAATTGAAGAAATAGTATCCAGAGACCGCCACAAGG
AAATAAATAAACAAGCTACAAAGGGAGACGGAAATTATTTTCAGAGTTTC
TTTAAAAAGTAACTTTCTTAAATGTATTTTGATTAATAAATTTATTTATA
TTTTA back to topprotein sequence of GSCOCG00009694001-RA >GSCOCG00009694001-PA ID=GSCOCG00009694001-PA|Name=GSCOCG00009694001-RA|organism=Cotesia congregata|type=polypeptide|length=154bp
MDKSPEEKPKKRKRSSSSSSGSDSEKEKRKRKKQYKKDKRKIKKKMKKLK
KKLKRKEKEVIKDAEEQLEVIEDNKSDQEDKTEVRSMAPMTKEEWEKRQS
VVRRVLDESTGRYRLIKGDGEVIEEIVSRDRHKEINKQATKGDGNYFQSF
FKK. back to topmRNA from alignment at scaffold_100:170653..174139- Legend: exonUTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >GSCOCG00009694001-RA ID=GSCOCG00009694001-RA|Name=GSCOCG00009694001-RA|organism=Cotesia congregata|type=mRNA|length=3487bp|location=Sequence derived from alignment at scaffold_100:170653..174139- (Cotesia congregata)
AGGTGCTCAAAGTTTTTGGAAAGGAGTTTATTAATCTGCTGCAATGTAAG
TATGTCAGAATAATAAATGTTTTTTTTTTGTTGTCAATTTTGTGTTTATT
TGGACAAAAATATTTTTTGGTAAATAAAAGTGGAAAATTTTTTTTTGGAG
GTTTGACTTATTTTTTGGTTTCAATAATAATAAAATATTTATTTGTTATT
ATAAGAAAAAAAAATTGTTTTAATCGAAAAAATAATATTCAATTATTAAA
AGTGTCTATAACTCCTACACCGAAAAAAAGATGAAAATAAAATTAGCACA
GCTGAAAGTTTTCAAAATTTTTTTTATTAATAAAATTATTACAAAAAAAT
TAAAATAAAAAATTGCACTTGTAAAAAATTAAAAAACTATAAGTGCAATT
TTTTAAAAATATTTTTTTATTGCTAATTTAATTAATAAAAATTTTTCGCT
GTCGGCCAATTTATAATACTAAAGTTAGCCGACTTAATTTTTTGATTTTT
TTTTTAACAATTAAATTATAAGAAAAAAATATTTTTTTAAAATTGCACTT
ACAGTTTTTAAAGTTTTTTACAAGTGGAATTTTTTTTTAATTTTTTTGTA
ATCATTTTTTCAATAAAAAAAAATTCTAAAAATTATTAAATGTCAAAAAA
AATTATGATAGTTATTATTAATAAAATAATAAATAAATAAACTAATTTTA
AAAACTTACTGAAAATAATTAGAGATTGTAAAAACTTACTAAACAAAATA
GAAATTTGTACCTTGAATAAAACTATAAAATTTCTCCTCGAAGTGATTTA
TTAAAGACTAAAAGTAAAACTAACAATTGTAGATGGATAAATCACCTGAA
GAAAAGCCGAAAAAAAGAAAACGGAGTTCTAGTTCAAGTTCAGGTTCAGA
TTCCGAGAAAGAAAAGCGAAAGAGAAAGAAGCAGTATAAGAAGGACAAAA
GGAAGATAAAGAAAAAGATGAAAAAGCTTAAGAAAAAACTGAAAAGAAAG
GAAAAAGAAGTAATTAAAGACGCCGAGGAGCAGTTGGAGGTGATTGAGGA
CAACAAGTCCGATCAAGAGGATAAGACTGAGGTGAGATCTATGGCGCCTA
TGACAAAGGAAGAATGGGAGAAAAGGCAGAGTGTTGTTAGGAGGGTTCTT
GACGAATCTACTGGAAGATACAGGTATCTTCAATATTATTATTATTATTA
TTATTATTATTATTATTATTATTGTGTTGATATTAAGAACATCTAAATTA
CATGAATCTTATTTCAGATGAATAATAATAATAATAATAAAATTTTAGCT
CAGAATTATTATTATTAAAAATTTAATCAATTTTTAAATTTTCAAAATAA
TAATAATAATAATAATAATAATAATATATTTATTTTTTAGCATCAGCTAT
TTGTCATACAATATTTTGAAATAATTTTTAACATGTGATTACATAGAATT
TCTTATTTTAACAATTAAAAATGAGCTCTCATAAATACAATAAATAAAAT
AATATTGTTGTTACATATAAGATAAATTTACGCTTTGTTTTGTTCTTTTT
CAGTCTTTTCAAACTTAATAATTTAATTCACAGACCAATTATCACAAGTT
TTTACATAAATTTTAAGGGCACGCTTAAAACTATTCAGTGTTTTTTCTTT
TTTTATGTTATCCGGTATTTTGTTGTACCATTGAAAACCTTGGTATGTTA
TTGACTTTTCAGCAGTGTGTGTTCTAGTATGATTAATATGTAATTTAGCG
CTATTCCTAGTGTGATAATTGTGTCTATCACCAGCTATTATAATTGTATC
CAATAGATAAGTAGGTGTTAGTTTATTAATCATTTTGAAAATCATTATTA
GTGTATTGTATAAAATTCTCTGCTTTATCGTCATCCATCCCAAGGTTTCC
AACATTAAGCTAATTTTAGTGTATTTACTAACTTCTAATATTACACGCAT
TGCACGGTTCTGTAGCTTTTGTAGAATATCTAAATGGTGTTGATTATAAT
TGATCATTAAGGTACTGCAATATTCTAGATGTGGTGAAATAATTGCTTTA
TATATAATGACTTTTGTATAATGTGTTACATTACTACCTAAACGACCCAA
CATATTTATTTTCTTTGCGACTTTATTAATAGTATACAATGCGTTCTCTT
TCATCGATAGATTATCATCTATCATAATTCCCAAGTACTTAGTTTTTTTC
TTTTCTTTTACTTGTACACCATTTAACATAATCTTACATTTCCCTCTCGC
ATCTTTTATTCTATGATCGTGAATTATCATGAAAATGGTCTTTTCTATAT
TAATTTTCAACTGCATTTCTATTAACCATGAATTTAATAAAGTCAATACT
CTGTTAAGTTTGCTTTCAATAATTTGATAATGTCGACTAGAAAAATATAA
AGCCATATCATCTGCGAATAAACGACATACAACACCGCTTTTATCAAATA
ATTTAACTACATTATTTATATATAATAGAAACAGTACTGGACCTAACTTT
GAGCCTTGAGGAACACCAACATCTATATCTATCTGATCTGAAACAGTATT
TCTATATTGAACTTTTTGCTTTCGATTTGAAAGGTACGAACTAAACCAAT
CTTTTACTGTTCCTGTTATCCCTAATGCTTCAAGAGTATTTAGCAATTTG
GCTCTGTTAATTGTTTCAAAGGCTTTAGAAAAGTCGATACAAAGTAAGCC
TGTAAGCAGACCTTTGTCAAGACTATTCCTCCACTCAATAAAACAATTTT
GCAGAGCCGTTTCGCAGGAATGAGACTTACGAAAACCTGATTGTTCTGAA
TTTAAGATGTTATGTTCAGTTATAAATTTATCTAGTTGATCTTTAACTAT
CTGTTCCAAGATTTGCTCAAAAATAGGCAATGTATTGATGGGCCTAAGGT
CACCAGCTTCAATGCTATCTTTTTTCTTCTGAATAGGTATTACCGTAGCA
ACCTTCCAACTATCTGGCACCTTGCCCAATTTTAAAGAATTATTTAAGAT
AAATAGTACAATGTCTCTCTCTGTTTCCCAAATAAATTTCATAACTCTAG
CATTTATCTCATTCTTCGAACCCTTTTTAATATCTAAATTCTTTATAATT
TTATCTACCTGTTCCTCAGTAACTTCATTAAAACTATCCCATAGAACACT
GTTTTTATTATTCTCTTCTTGTCTTAATAATAAAATTAATAATAATAATA
ATAATACTAATAAAAAAATCAAATTTTGATTTAAGAATATTATTATTAAA
AATTAAGAAATGTTTTTTAATTAATAATAATAAAAGTTAAAAAAAAAAAT
AATAATAATGATAATTGTTGCAGGTTAATTAAAGGAGACGGTGAAGTAAT
TGAAGAAATAGTATCCAGAGACCGCCACAAGGAAATAAATAAACAAGCTA
CAAAGGGAGACGGAAATTATTTTCAGAGTTTCTTTAAAAAGTAACTTTCT
TAAATGTATTTTGATTAATAAATTTATTTATATTTTA back to topCoding sequence (CDS) from alignment at scaffold_100:170653..174139- >GSCOCG00009694001-RA ID=GSCOCG00009694001-RA|Name=GSCOCG00009694001-RA|organism=Cotesia congregata|type=CDS|length=462bp|location=Sequence derived from alignment at scaffold_100:170653..174139- (Cotesia congregata)
ATGGATAAATCACCTGAAGAAAAGCCGAAAAAAAGAAAACGGAGTTCTAG
TTCAAGTTCAGGTTCAGATTCCGAGAAAGAAAAGCGAAAGAGAAAGAAGC
AGTATAAGAAGGACAAAAGGAAGATAAAGAAAAAGATGAAAAAGCTTAAG
AAAAAACTGAAAAGAAAGGAAAAAGAAGTAATTAAAGACGCCGAGGAGCA
GTTGGAGGTGATTGAGGACAACAAGTCCGATCAAGAGGATAAGACTGAGG
TGAGATCTATGGCGCCTATGACAAAGGAAGAATGGGAGAAAAGGCAGAGT
GTTGTTAGGAGGGTTCTTGACGAATCTACTGGAAGATACAGGTTAATTAA
AGGAGACGGTGAAGTAATTGAAGAAATAGTATCCAGAGACCGCCACAAGG
AAATAAATAAACAAGCTACAAAGGGAGACGGAAATTATTTTCAGAGTTTC
TTTAAAAAGTAA back to top
Synonyms
The feature 'GSCOCG00009694001-RA' has the following synonyms
| Synonym |
|---|
| GSCOCG00009694001 |
| GSCOCG00009694001-PA |
|