Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.48 |
| QI | 0|0|0|1|0.66|0.5|4|0|209 |
| eAED | 0.48 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000042 | Cotesia_flavipes000042 | Cotesia flavipes | gene | scaffold_4 59991..60854 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000042-RA:exon:87 | Cotesia_flavipes000042-RA:exon:87 | Cotesia flavipes | exon | scaffold_4 59991..60145 + |
| Cotesia_flavipes000042-RA:exon:88 | Cotesia_flavipes000042-RA:exon:88 | Cotesia flavipes | exon | scaffold_4 60228..60480 + |
| Cotesia_flavipes000042-RA:exon:89 | Cotesia_flavipes000042-RA:exon:89 | Cotesia flavipes | exon | scaffold_4 60542..60700 + |
| Cotesia_flavipes000042-RA:exon:90 | Cotesia_flavipes000042-RA:exon:90 | Cotesia flavipes | exon | scaffold_4 60792..60854 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000042-RA:cds | Cotesia_flavipes000042-RA:cds | Cotesia flavipes | CDS | scaffold_4 59991..60145 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_flavipes000042-RA ID=Cotesia_flavipes000042-RA|Name=Cotesia_flavipes000042-RA|organism=Cotesia flavipes|type=mRNA|length=630bp|location=Sequence derived from alignment at scaffold_4:59991..60854+ (Cotesia flavipes)|Notes=Excludes all bases but those of type(s): exon.
ATGAAAGTACGTTTTAAGAATGTCAATGAATTATTATCAGATATTTTTAA
GCAACAAATAAATTTTACGTCTATAAGTCTCGTGGATCGCAAGTGGGCGA
TTACTCGCCAAATGAAGTATAATCCAAGCTCTGCTTATATTATTCAAAGT
ATCAAACGAATTCATCTTGAATTAGGGCTACTGTGTGATGAACTGGTTAA
AATATTCCAAGTTCCAATTGTTCTTACAACGATTACATCATTTGTTGCCT
CAATAGGACTACTAATGCGTTTATATTTAAATTTGATAGATTCCAAAATA
AGCGTAAATACAAAAGTACTTAATGTCACTGTTTTAATGTCTTGGTTTTC
AATTTATGCAATTAAAATATTTTCCATCAATTACATTTGTGAAGAAACTG
TCGAAGAGTGGAAAAAAACTGGGGAAATAGTTCATAAAATCGAGATAGAA
ACCAAAAATCCTAAGCTACGAAATGAACTTCAACAATTTTCAATTCAACA
GATAAAAAATCCTTTAAAATTTACTCCCTGCGGATTTTTTGATCTTAGTT
ATTATTTTGTTCGAGATTTTGCAGGGTCGATGACAGCGTATCTTGTTCTA
TTAATTCAAACATATTCTAACAACTCATGA back to topprotein sequence of Cotesia_flavipes000042-RA >Cotesia_flavipes000042-PA ID=Cotesia_flavipes000042-PA|Name=Cotesia_flavipes000042-RA|organism=Cotesia flavipes|type=polypeptide|length=210bp
MKVRFKNVNELLSDIFKQQINFTSISLVDRKWAITRQMKYNPSSAYIIQS
IKRIHLELGLLCDELVKIFQVPIVLTTITSFVASIGLLMRLYLNLIDSKI
SVNTKVLNVTVLMSWFSIYAIKIFSINYICEETVEEWKKTGEIVHKIEIE
TKNPKLRNELQQFSIQQIKNPLKFTPCGFFDLSYYFVRDFAGSMTAYLVL
LIQTYSNNS. back to topmRNA from alignment at scaffold_4:59991..60854+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_flavipes000042-RA ID=Cotesia_flavipes000042-RA|Name=Cotesia_flavipes000042-RA|organism=Cotesia flavipes|type=mRNA|length=864bp|location=Sequence derived from alignment at scaffold_4:59991..60854+ (Cotesia flavipes)
ATGAAAGTACGTTTTAAGAATGTCAATGAATTATTATCAGATATTTTTAA
GCAACAAATAAATTTTACGTCTATAAGTCTCGTGGATCGCAAGTGGGCGA
TTACTCGCCAAATGAAGTATAATCCAAGCTCTGCTTATATTATTCAAAGT
ATCAAGTAAGTATTGATGATTAAGAGTGGCTATCCCCCCTAAGTAATCAA
TTAATGAATATTCATACTGATAAAAATTAATTTTCAGACGAATTCATCTT
GAATTAGGGCTACTGTGTGATGAACTGGTTAAAATATTCCAAGTTCCAAT
TGTTCTTACAACGATTACATCATTTGTTGCCTCAATAGGACTACTAATGC
GTTTATATTTAAATTTGATAGATTCCAAAATAAGCGTAAATACAAAAGTA
CTTAATGTCACTGTTTTAATGTCTTGGTTTTCAATTTATGCAATTAAAAT
ATTTTCCATCAATTACATTTGTGAAGAAACTGTCGAAGAGGTAATTAATT
TTTACTTCATCATCTTCTTTTTTAGTAGTTGAGATAAAATTCTGTTAACA
GTGGAAAAAAACTGGGGAAATAGTTCATAAAATCGAGATAGAAACCAAAA
ATCCTAAGCTACGAAATGAACTTCAACAATTTTCAATTCAACAGATAAAA
AATCCTTTAAAATTTACTCCCTGCGGATTTTTTGATCTTAGTTATTATTT
TGTTCGAGATGTAAGTAAGACATAACTTATTAATTTGTATTTTCACAAAA
TTAAAATTTATATTTCTTCTTTAATAATTAAAATTATATTTCTTCTTTCA
GTTTGCAGGGTCGATGACAGCGTATCTTGTTCTATTAATTCAAACATATT
CTAACAACTCATGA back to topCoding sequence (CDS) from alignment at scaffold_4:59991..60854+ >Cotesia_flavipes000042-RA ID=Cotesia_flavipes000042-RA|Name=Cotesia_flavipes000042-RA|organism=Cotesia flavipes|type=CDS|length=630bp|location=Sequence derived from alignment at scaffold_4:59991..60854+ (Cotesia flavipes)
ATGAAAGTACGTTTTAAGAATGTCAATGAATTATTATCAGATATTTTTAA
GCAACAAATAAATTTTACGTCTATAAGTCTCGTGGATCGCAAGTGGGCGA
TTACTCGCCAAATGAAGTATAATCCAAGCTCTGCTTATATTATTCAAAGT
ATCAAACGAATTCATCTTGAATTAGGGCTACTGTGTGATGAACTGGTTAA
AATATTCCAAGTTCCAATTGTTCTTACAACGATTACATCATTTGTTGCCT
CAATAGGACTACTAATGCGTTTATATTTAAATTTGATAGATTCCAAAATA
AGCGTAAATACAAAAGTACTTAATGTCACTGTTTTAATGTCTTGGTTTTC
AATTTATGCAATTAAAATATTTTCCATCAATTACATTTGTGAAGAAACTG
TCGAAGAGTGGAAAAAAACTGGGGAAATAGTTCATAAAATCGAGATAGAA
ACCAAAAATCCTAAGCTACGAAATGAACTTCAACAATTTTCAATTCAACA
GATAAAAAATCCTTTAAAATTTACTCCCTGCGGATTTTTTGATCTTAGTT
ATTATTTTGTTCGAGATTTTGCAGGGTCGATGACAGCGTATCTTGTTCTA
TTAATTCAAACATATTCTAACAACTCATGA back to top
Synonyms
The feature 'Cotesia_flavipes000042-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold_4-augustus-gene-0.103-mRNA-1 |
|