Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.07 |
QI | 0|0|0|1|1|1|2|0|224 |
eAED | 0.07 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
Cotesia_glomerata021311 | Cotesia_glomerata021311 | Cotesia glomerata | gene | Contig32352 407..2192 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_glomerata021311-RA:exon:3508 | Cotesia_glomerata021311-RA:exon:3508 | Cotesia glomerata | exon | Contig32352 407..773 + |
Cotesia_glomerata021311-RA:exon:3509 | Cotesia_glomerata021311-RA:exon:3509 | Cotesia glomerata | exon | Contig32352 1885..2192 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_glomerata021311-RA:cds | Cotesia_glomerata021311-RA:cds | Cotesia glomerata | CDS | Contig32352 407..773 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_glomerata021311-RA ID=Cotesia_glomerata021311-RA|Name=Cotesia_glomerata021311-RA|organism=Cotesia glomerata|type=mRNA|length=675bp|location=Sequence derived from alignment at Contig32352:407..2192+ (Cotesia glomerata)|Notes=Excludes all bases but those of type(s): exon.
GATTCACATGGAGGTATGGGCTTGACACCTCGAGGCAAAGAGAGTCTACC GATAGAAGTCTTGCCGACGATTAAGATAGTAAAAATAGCATCTGGAGCTG ATCATTTGGTGATGCTGACAGACCGCGGTCGTGTTTACACTTGTGGATGC GCTGAGCAAGGACAGCTTGGACGGATTCCGCCAAGATCAGTAGACCGACA TTCTCGTAATGCCTTGTTACACATACTTACACCAGGACTAGTTGGGTTTA AAGTTTCCCGCAATTTGGTGTTCGATGACATCTGGGCTGGCCAGTATTGC ACTTTGACGAGAGATCGCAAGACCGGTGATATTTGGGCGTTTGGATTGAA TAATTATCACCAAATAGGTCTTAAAGACACTGTACCATATTTCCAGCCAA ATTTATCAAAAACTTTTAGTAATAAACAATGGAAACATATCAGCAGTGGT CAGCATCATACAATAGCCCTCGATGATCTTGGTTGTGTTTATGTTTTAGG ACGTAAAGAATACGGTCGACTTGGTCTAGGTCCTAATTGTAATGATGCCA CAGAATTGACTAAAGTTGAAAGCTTAGAAAAGAAAAAAGTTATTGATGTT GCTGCTGGTAGTGCGCAATCTTTTGCTGTTACTGATTCTGGNNNNNNNNN NGCCTTAGAGAAAATTTATATTTGA back to topprotein sequence of Cotesia_glomerata021311-RA >Cotesia_glomerata021311-PA ID=Cotesia_glomerata021311-PA|Name=Cotesia_glomerata021311-RA|organism=Cotesia glomerata|type=polypeptide|length=225bp
DSHGGMGLTPRGKESLPIEVLPTIKIVKIASGADHLVMLTDRGRVYTCGC AEQGQLGRIPPRSVDRHSRNALLHILTPGLVGFKVSRNLVFDDIWAGQYC TLTRDRKTGDIWAFGLNNYHQIGLKDTVPYFQPNLSKTFSNKQWKHISSG QHHTIALDDLGCVYVLGRKEYGRLGLGPNCNDATELTKVESLEKKKVIDV AAGSAQSFAVTDSGXXXALEKIYI. back to topmRNA from alignment at Contig32352:407..2192+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_glomerata021311-RA ID=Cotesia_glomerata021311-RA|Name=Cotesia_glomerata021311-RA|organism=Cotesia glomerata|type=mRNA|length=1786bp|location=Sequence derived from alignment at Contig32352:407..2192+ (Cotesia glomerata) GATTCACATGGAGGTATGGGCTTGACACCTCGAGGCAAAGAGAGTCTACC
GATAGAAGTCTTGCCGACGATTAAGATAGTAAAAATAGCATCTGGAGCTG
ATCATTTGGTGATGCTGACAGACCGCGGTCGTGTTTACACTTGTGGATGC
GCTGAGCAAGGACAGCTTGGACGGATTCCGCCAAGATCAGTAGACCGACA
TTCTCGTAATGCCTTGTTACACATACTTACACCAGGACTAGTTGGGTTTA
AAGTTTCCCGCAATTTGGTGTTCGATGACATCTGGGCTGGCCAGTATTGC
ACTTTGACGAGAGATCGCAAGACCGGTGATATTTGGGCGTTTGGATTGAA
TAATTATCACCAAATAGGTATTTTATTGGTCATTATTACAATTTGACNNN
NNNNNNNATTGCACTTTGACGAGAGATCGCAAGACCGGTGATATTTGGGC
GTTTGGATTGAATAACTATCACCAAATAGGTATTTTATTGGTCATTATTA
CAATTTGATGTTCTAATGAGCAAATTATTTAAGTCCATTTAAGAAAATCC
TTTATTTATCTGAAAAGTAATAAATTTTATTCAAGTAGAAATTTAATATC
TGATTATAGTGCATCTCTATATAAAATTTCTTTGAATTTTAAAATGCCTT
AGAGAAAATTTATATTTGAAAAAAAACTAATTATAAATCTCTGCAATGAT
AAAGATCTATTTAATTAAAAATGTTCTGAGAAAATAATTGATTACGTAAC
AAATTTTTTATAAGTCAAAATTTTACAGACAAAACATCTCTAAATATTTA
TTATAAACTAGAAAAAAATATTTACTTGATTCAATAGAGAAAAAAAATCC
TAGCAAATCATTTTACGAAGTCTTATCGCCTTAAAAAAAAATGAAAAATT
CTTTAATTAAGTTAAATTTACTCAAACTGGAAAATAAGTCTTAGCTTAAG
AAAATTTCAACTTGGTTTAAGACAATAAAATTTTTCAAAATGATTTTCTT
AATTTAAACATTTTTTTTTTTTTTCAGTGTAAGGTAAAAGACCCAGTTAT
TGCTACTGGCCTAGTTATTGACATTTGCAATTTTATTTTAATTAAAAAAA
ACACATCAACTCTTATAAATTAATTAATATAATTTTTGAATTATAAATTT
TAAGACANNNNNNNNNNGTTATTGCTACTGGCCTAGTTATTGACATTTGC
AATTTTATTTTAATTAAAAAAAACATATCAACTCTTATAAATTAATTAAT
ATAATTTTTGAATTATAAATTTTAAGACCTTTGGTTTTTTGAGAATATTT
TATTTTTTTAATTAGAATAAAATTGCAAGTGTCAAATAAAATATATTCAT
CATATCAATAAACCACATTCTAAAAAATGTTAAATTACATAATTTGCTAA
TTAGAATATCAGAAAAAATTATCAAAAATTTTAATTGTCAACTAAAGATT
AATATTAAAATTTTAATTATTTTTTCAGGTCTTAAAGACACTGTACCATA
TTTCCAGCCAAATTTATCAAAAACTTTTAGTAATAAACAATGGAAACATA
TCAGCAGTGGTCAGCATCATACAATAGCCCTCGATGATCTTGGTTGTGTT
TATGTTTTAGGACGTAAAGAATACGGTCGACTTGGTCTAGGTCCTAATTG
TAATGATGCCACAGAATTGACTAAAGTTGAAAGCTTAGAAAAGAAAAAAG
TTATTGATGTTGCTGCTGGTAGTGCGCAATCTTTTGCTGTTACTGATTCT
GGNNNNNNNNNNGCCTTAGAGAAAATTTATATTTGA back to topCoding sequence (CDS) from alignment at Contig32352:407..2192+ >Cotesia_glomerata021311-RA ID=Cotesia_glomerata021311-RA|Name=Cotesia_glomerata021311-RA|organism=Cotesia glomerata|type=CDS|length=675bp|location=Sequence derived from alignment at Contig32352:407..2192+ (Cotesia glomerata) GATTCACATGGAGGTATGGGCTTGACACCTCGAGGCAAAGAGAGTCTACC GATAGAAGTCTTGCCGACGATTAAGATAGTAAAAATAGCATCTGGAGCTG ATCATTTGGTGATGCTGACAGACCGCGGTCGTGTTTACACTTGTGGATGC GCTGAGCAAGGACAGCTTGGACGGATTCCGCCAAGATCAGTAGACCGACA TTCTCGTAATGCCTTGTTACACATACTTACACCAGGACTAGTTGGGTTTA AAGTTTCCCGCAATTTGGTGTTCGATGACATCTGGGCTGGCCAGTATTGC ACTTTGACGAGAGATCGCAAGACCGGTGATATTTGGGCGTTTGGATTGAA TAATTATCACCAAATAGGTCTTAAAGACACTGTACCATATTTCCAGCCAA ATTTATCAAAAACTTTTAGTAATAAACAATGGAAACATATCAGCAGTGGT CAGCATCATACAATAGCCCTCGATGATCTTGGTTGTGTTTATGTTTTAGG ACGTAAAGAATACGGTCGACTTGGTCTAGGTCCTAATTGTAATGATGCCA CAGAATTGACTAAAGTTGAAAGCTTAGAAAAGAAAAAAGTTATTGATGTT GCTGCTGGTAGTGCGCAATCTTTTGCTGTTACTGATTCTGGNNNNNNNNN NGCCTTAGAGAAAATTTATATTTGA back to top
Synonyms
The feature 'Cotesia_glomerata021311-RA' has the following synonyms
Synonym |
maker-Contig32352-augustus-gene-0.3-mRNA-1 |
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