Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.00 |
QI | 269|1|1|1|1|1|2|612|212 |
eAED | 0.00 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
Cotesia_vestalis004517 | Cotesia_vestalis004517 | Cotesia vestalis | gene | scaffold_523 40059..42079 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_vestalis004517-RA:exon:1321 | Cotesia_vestalis004517-RA:exon:1321 | Cotesia vestalis | exon | scaffold_523 40059..40345 + |
Cotesia_vestalis004517-RA:exon:1322 | Cotesia_vestalis004517-RA:exon:1322 | Cotesia vestalis | exon | scaffold_523 40847..42079 + |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_vestalis004517-RA:five_prime_utr | Cotesia_vestalis004517-RA:five_prime_utr | Cotesia vestalis | five_prime_UTR | scaffold_523 40059..40327 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_vestalis004517-RA:cds | Cotesia_vestalis004517-RA:cds | Cotesia vestalis | CDS | scaffold_523 40328..40345 + |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Cotesia_vestalis004517-RA:three_prime_utr | Cotesia_vestalis004517-RA:three_prime_utr | Cotesia vestalis | three_prime_UTR | scaffold_523 41468..42079 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_vestalis004517-RA ID=Cotesia_vestalis004517-RA|Name=Cotesia_vestalis004517-RA|organism=Cotesia vestalis|type=mRNA|length=1520bp|location=Sequence derived from alignment at scaffold_523:40059..42079+ (Cotesia vestalis)|Notes=Excludes all bases but those of type(s): exon.
GATACGAGTAAGAGTAAGGAGTAAAGAGAGTCTTTATAACAGAGTGAATA ATCTACTGGGTGATGTGTAACTCACTTGGAATTGGAAATGGTAGGTATAT AACAGAGAAAGAGAATCCAACTTTGGAATTACTCTCACTCTGCCCCCGTC TCTTCTTCTACTAAAAACCCCCACAAATATCCACGTATCCCTCTCGACCT CACGGGTATAAAGGACACAGGTGAACCTTCTTCCAAGTCACACACAGCCG AATCGGCGTAGCAGTCAACATGAATCCTCTTTTTGCTTGCGTGTTAATTG GACTAGTAGGCTTAGCCTGCTCAGAAGCTCCATTATCTGGATACAATTAC AACAGACCAAGTGGTGGTAGTGGTGGATACTCAAGTGGCGGTGGATACTC TAGTGGTGGTGGATACTCCGGTGGTGGCGGCTACTCTGGCGGTGGTGGAT ACTCCGGTGGTGGCGGCTACTCTGGCGGTGGAAGCGGTGGATACCAACAA GTGTCCATCGGCTCCCAATCCAACGAAGGTGCTAACGTTGACGGCGCGCT CCTCGAGCAGATCAGACAAATCCTCTTGAAAGAAGAAGCCCAAGCCTCTC AATCCGGCGGCTTCGGAGGCTCTGGCTACGCACCCAGCAGCAGCTACGGC GCCCCAAGCTCCAGTTACGGCGCTCCAAGCTCCAGTTACGGTGCTCCTAG CTCCAGCTACGGAGTACCTTCCTACAGCAGCCGTGTTGTCGGCATCGATC TCGAGGGCATCAGACAAGCCATCCAGGTAGCCCAATTCAACCAAGTCAGC CAAGGATCCTCCGGTGGATTCGGCGGCTACCCCAGCGGACCCAGCCAGCC ATCAGGAAGCTACGGAGCCCCCAGCAGGCCCAGCGGCAGCTACGGCGCTC CTTTCTAAATCAAATAAAATATTAATTATTGATAAATCCGATAAATCCAG CCACGGACGCGGGCGTTCTCCATTTTTAAGTATTATTCATTAAATATTAA ATGAAAAATCGTAGTTTCATTTAATATTTACTTCTGTTATCATTTTTACA TCTTTCACTGGATTAATCTAAATCTAAAGTCGGATTTGTTTTTTTTACTT GACACTCAACGTAACAGATATCTGAATTTTTACTCTTTTATTAAATATTA TTCGGATTTTTTTTTTTTATTTCTTTTTTTAATAAAAAAATTTCGTTTAA TTTAAAATAATAAATTGCCGGGTGTCTGTTACTGTTAGTATCATTTAATA TTAAAAAAAAAAATTTTACGCTTTTGTTTTTTCATAAATTCTGAAGAGTA CCGTCGAATAAAAGTGCGTTATTTAAATAAAAATATCACCGGGACAAAAA TAAATTTATTATTGTTAATAATAAATTATGAGCTAGAGTAGAAGTCTAAG AGGAGGATGATCGTGATTAGTACGAAATTTTATAAATTTTTTTTTTATAA AAATTCGTACATTGTAAATATATTTACACACATACACACTTACACTCTGT TATCGTAATTATTTTTATTA back to topprotein sequence of Cotesia_vestalis004517-RA >Cotesia_vestalis004517-PA ID=Cotesia_vestalis004517-PA|Name=Cotesia_vestalis004517-RA|organism=Cotesia vestalis|type=polypeptide|length=213bp
MNPLFACVLIGLVGLACSEAPLSGYNYNRPSGGSGGYSSGGGYSSGGGYS GGGGYSGGGGYSGGGGYSGGGSGGYQQVSIGSQSNEGANVDGALLEQIRQ ILLKEEAQASQSGGFGGSGYAPSSSYGAPSSSYGAPSSSYGAPSSSYGVP SYSSRVVGIDLEGIRQAIQVAQFNQVSQGSSGGFGGYPSGPSQPSGSYGA PSRPSGSYGAPF. back to topmRNA from alignment at scaffold_523:40059..42079+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_vestalis004517-RA ID=Cotesia_vestalis004517-RA|Name=Cotesia_vestalis004517-RA|organism=Cotesia vestalis|type=mRNA|length=2021bp|location=Sequence derived from alignment at scaffold_523:40059..42079+ (Cotesia vestalis) GATACGAGTAAGAGTAAGGAGTAAAGAGAGTCTTTATAACAGAGTGAATA
ATCTACTGGGTGATGTGTAACTCACTTGGAATTGGAAATGGTAGGTATAT
AACAGAGAAAGAGAATCCAACTTTGGAATTACTCTCACTCTGCCCCCGTC
TCTTCTTCTACTAAAAACCCCCACAAATATCCACGTATCCCTCTCGACCT
CACGGGTATAAAGGACACAGGTGAACCTTCTTCCAAGTCACACACAGCCG
AATCGGCGTAGCAGTCAACATGAATCCTCTTTTTGCTGTAAGTATTTATA
TCATCTTCATAAGTATCATCTTCTTTAAAAAACAAAGAACACTTGGAAAA
TTAGTTTCGGTGGATTTTTAAAAAAGTTTCAAGTTTTTCGGTTCATTTTT
ATTTGAGACTAATTTTTAAAGTGTTATTTATTATATTAATTTTTATTATT
TATAGAATCTTATTAAAAATTTTTTTAAATATTTTGTGGAATAAGAATTA
TTAATATTTTTATTTGTTGAAAATTTTTTTATTCAGCAAATAAAAAAAAA
CAGTTTAATAATTCATATTTATAATAAAAAAATTTATTTAGTTATTTTTA
TATCATTTTAAATTGACAAAATAACTAATCAAATTTTTTAAACTTAAAAT
TTTAAATTACTTGAATTATCATAAATATTAATTAAATTGGTAAAATATTT
TATAAAAAATCCATTAATCTATAAATTTATATTATATTTGTTCTTCTCAA
GATCTGAACTAAAAAATCTATATTTTAAATACTTACAGTGCGTGTTAATT
GGACTAGTAGGCTTAGCCTGCTCAGAAGCTCCATTATCTGGATACAATTA
CAACAGACCAAGTGGTGGTAGTGGTGGATACTCAAGTGGCGGTGGATACT
CTAGTGGTGGTGGATACTCCGGTGGTGGCGGCTACTCTGGCGGTGGTGGA
TACTCCGGTGGTGGCGGCTACTCTGGCGGTGGAAGCGGTGGATACCAACA
AGTGTCCATCGGCTCCCAATCCAACGAAGGTGCTAACGTTGACGGCGCGC
TCCTCGAGCAGATCAGACAAATCCTCTTGAAAGAAGAAGCCCAAGCCTCT
CAATCCGGCGGCTTCGGAGGCTCTGGCTACGCACCCAGCAGCAGCTACGG
CGCCCCAAGCTCCAGTTACGGCGCTCCAAGCTCCAGTTACGGTGCTCCTA
GCTCCAGCTACGGAGTACCTTCCTACAGCAGCCGTGTTGTCGGCATCGAT
CTCGAGGGCATCAGACAAGCCATCCAGGTAGCCCAATTCAACCAAGTCAG
CCAAGGATCCTCCGGTGGATTCGGCGGCTACCCCAGCGGACCCAGCCAGC
CATCAGGAAGCTACGGAGCCCCCAGCAGGCCCAGCGGCAGCTACGGCGCT
CCTTTCTAAATCAAATAAAATATTAATTATTGATAAATCCGATAAATCCA
GCCACGGACGCGGGCGTTCTCCATTTTTAAGTATTATTCATTAAATATTA
AATGAAAAATCGTAGTTTCATTTAATATTTACTTCTGTTATCATTTTTAC
ATCTTTCACTGGATTAATCTAAATCTAAAGTCGGATTTGTTTTTTTTACT
TGACACTCAACGTAACAGATATCTGAATTTTTACTCTTTTATTAAATATT
ATTCGGATTTTTTTTTTTTATTTCTTTTTTTAATAAAAAAATTTCGTTTA
ATTTAAAATAATAAATTGCCGGGTGTCTGTTACTGTTAGTATCATTTAAT
ATTAAAAAAAAAAATTTTACGCTTTTGTTTTTTCATAAATTCTGAAGAGT
ACCGTCGAATAAAAGTGCGTTATTTAAATAAAAATATCACCGGGACAAAA
ATAAATTTATTATTGTTAATAATAAATTATGAGCTAGAGTAGAAGTCTAA
GAGGAGGATGATCGTGATTAGTACGAAATTTTATAAATTTTTTTTTTATA
AAAATTCGTACATTGTAAATATATTTACACACATACACACTTACACTCTG
TTATCGTAATTATTTTTATTA back to topCoding sequence (CDS) from alignment at scaffold_523:40059..42079+ >Cotesia_vestalis004517-RA ID=Cotesia_vestalis004517-RA|Name=Cotesia_vestalis004517-RA|organism=Cotesia vestalis|type=CDS|length=639bp|location=Sequence derived from alignment at scaffold_523:40059..42079+ (Cotesia vestalis) ATGAATCCTCTTTTTGCTTGCGTGTTAATTGGACTAGTAGGCTTAGCCTG CTCAGAAGCTCCATTATCTGGATACAATTACAACAGACCAAGTGGTGGTA GTGGTGGATACTCAAGTGGCGGTGGATACTCTAGTGGTGGTGGATACTCC GGTGGTGGCGGCTACTCTGGCGGTGGTGGATACTCCGGTGGTGGCGGCTA CTCTGGCGGTGGAAGCGGTGGATACCAACAAGTGTCCATCGGCTCCCAAT CCAACGAAGGTGCTAACGTTGACGGCGCGCTCCTCGAGCAGATCAGACAA ATCCTCTTGAAAGAAGAAGCCCAAGCCTCTCAATCCGGCGGCTTCGGAGG CTCTGGCTACGCACCCAGCAGCAGCTACGGCGCCCCAAGCTCCAGTTACG GCGCTCCAAGCTCCAGTTACGGTGCTCCTAGCTCCAGCTACGGAGTACCT TCCTACAGCAGCCGTGTTGTCGGCATCGATCTCGAGGGCATCAGACAAGC CATCCAGGTAGCCCAATTCAACCAAGTCAGCCAAGGATCCTCCGGTGGAT TCGGCGGCTACCCCAGCGGACCCAGCCAGCCATCAGGAAGCTACGGAGCC CCCAGCAGGCCCAGCGGCAGCTACGGCGCTCCTTTCTAA back to top
Synonyms
The feature 'Cotesia_vestalis004517-RA' has the following synonyms
Synonym |
maker-scaffold_523-augustus-gene-0.32-mRNA-1 |
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