DV3009676-RA (mRNA) Daktulosphaira vitifoliae

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	DV3009676-RA
Unique Name	DV3009676-RA
Type	mRNA
Organism	Daktulosphaira vitifoliae (dvitifoliae)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
DV3009676	DV3009676	Daktulosphaira vitifoliae	gene	scaffold240 785635..790462 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
DV3009676-RA	DV3009676-PA	Daktulosphaira vitifoliae	polypeptide	scaffold240 785635..790462 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
DV3009676-RA-exon	DV3009676-RA-exon-1	Daktulosphaira vitifoliae	exon	scaffold240 785635..785653 +
DV3009676-RA-exon	DV3009676-RA-exon-2	Daktulosphaira vitifoliae	exon	scaffold240 785804..785823 +
DV3009676-RA-exon	DV3009676-RA-exon-3	Daktulosphaira vitifoliae	exon	scaffold240 785906..785968 +
DV3009676-RA-exon	DV3009676-RA-exon-4	Daktulosphaira vitifoliae	exon	scaffold240 786054..786064 +
DV3009676-RA-exon	DV3009676-RA-exon-5	Daktulosphaira vitifoliae	exon	scaffold240 786383..786487 +
DV3009676-RA-exon	DV3009676-RA-exon-6	Daktulosphaira vitifoliae	exon	scaffold240 786956..787040 +
DV3009676-RA-exon	DV3009676-RA-exon-7	Daktulosphaira vitifoliae	exon	scaffold240 787049..787205 +
DV3009676-RA-exon	DV3009676-RA-exon-8	Daktulosphaira vitifoliae	exon	scaffold240 788761..788828 +
DV3009676-RA-exon	DV3009676-RA-exon-9	Daktulosphaira vitifoliae	exon	scaffold240 789514..789640 +
DV3009676-RA-exon	DV3009676-RA-exon-10	Daktulosphaira vitifoliae	exon	scaffold240 789809..789821 +
DV3009676-RA-exon	DV3009676-RA-exon-11	Daktulosphaira vitifoliae	exon	scaffold240 790441..790462 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
DV3009676-RA-CDS	DV3009676-RA-CDS-1	Daktulosphaira vitifoliae	CDS	scaffold240 785635..785653 +
DV3009676-RA-CDS	DV3009676-RA-CDS-2	Daktulosphaira vitifoliae	CDS	scaffold240 785804..785823 +
DV3009676-RA-CDS	DV3009676-RA-CDS-3	Daktulosphaira vitifoliae	CDS	scaffold240 785906..785968 +
DV3009676-RA-CDS	DV3009676-RA-CDS-4	Daktulosphaira vitifoliae	CDS	scaffold240 786054..786064 +
DV3009676-RA-CDS	DV3009676-RA-CDS-5	Daktulosphaira vitifoliae	CDS	scaffold240 786383..786487 +
DV3009676-RA-CDS	DV3009676-RA-CDS-6	Daktulosphaira vitifoliae	CDS	scaffold240 786956..787040 +
DV3009676-RA-CDS	DV3009676-RA-CDS-7	Daktulosphaira vitifoliae	CDS	scaffold240 787049..787205 +
DV3009676-RA-CDS	DV3009676-RA-CDS-8	Daktulosphaira vitifoliae	CDS	scaffold240 788761..788828 +
DV3009676-RA-CDS	DV3009676-RA-CDS-9	Daktulosphaira vitifoliae	CDS	scaffold240 789514..789640 +
DV3009676-RA-CDS	DV3009676-RA-CDS-10	Daktulosphaira vitifoliae	CDS	scaffold240 789809..789821 +
DV3009676-RA-CDS	DV3009676-RA-CDS-11	Daktulosphaira vitifoliae	CDS	scaffold240 790441..790462 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at scaffold240:785635..790462+
coding sequence from alignment at scaffold240:785635..790462+

spliced messenger RNA

>DV3009676-RA ID=DV3009676-RA|Name=DV3009676-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=690bp|location=Sequence derived from alignment at scaffold240:785635..790462+ (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAGATATACATGAAATATGTGTGCACTACTATAACGGTGGTCTAAA
AAAATTACTTAAAAAAATTTTGTCCTCCTACCATCTAAATTTGTTTTCTA
GAAATAACCTACGTAAATTAAAAATGACAACGCGAAGTAATACTTATATT
TATTTAATTGGTCAGCCTATTTCAACTGTACCAAGTAATCGTTTGCCGTC
TAATGGTGAAGTATTACGTACAGAAGAAAACCATTCTAGTGATAATACTA
ATTCCGACGATGATTTTATTGTCAATGAAAAAAAATCAAAAAAAGTTCAA
AAAAAATTGAAACCTTTGATCACATCAGAATTATCAGCTGTGCTAGATAG
AACTAAGGTCAGTGATCGGCAAGCCACCTTTATCATTGGAGCTACACTAA
AAAGTCTTGGAGAGAATATTGATACGTTTGCATGTAGTCAAAGTACGATA
AAACTACATCTTAAAAATTTTCAAATAGCTTGGGATGGCTCAAAAATTAA
TTTTTCGTGTTTTTTTTTCTTGAGAATTGTATTAAACAATGTGGCCATAT
CATTAAATTCTTTACACGTGTGTGAAGAATTTGCTAACGCTGTTTGTCGC
ATTATGAAAACACATAGTCTTAAAAAGGAAAAGTGTTTGAACATGTTAAG
TGAAATTTTATATATAAGAAGTATTCCAATTGAATTTTAA

protein sequence of DV3009676-RA

>DV3009676-PA ID=DV3009676-PA|Name=DV3009676-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=230bp
MKDIHEICVHYYNGGLKKLLKKILSSYHLNLFSRNNLRKLKMTTRSNTYI
YLIGQPISTVPSNRLPSNGEVLRTEENHSSDNTNSDDDFIVNEKKSKKVQ
KKLKPLITSELSAVLDRTKVSDRQATFIIGATLKSLGENIDTFACSQSTI
KLHLKNFQIAWDGSKINFSCFFFLRIVLNNVAISLNSLHVCEEFANAVCR
IMKTHSLKKEKCLNMLSEILYIRSIPIEF.

mRNA from alignment at scaffold240:785635..790462+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>DV3009676-RA ID=DV3009676-RA|Name=DV3009676-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=4828bp|location=Sequence derived from alignment at scaffold240:785635..790462+ (Daktulosphaira vitifoliae)
ATGAAAGATATACATGAAAGTATCATCAATAACTCAAACATCATTTTACC
ATGAATTAACATATTATTATTTTTCAATTAAACAATGTTTAATTTAAAAT
CGTTTTAATGAACATATTAAACTTTTTTTTAATTGTGCAAGTTTTTAATT
TTAATTTTTTCTTTATTAGTATGTGTGCACTACTATAACGTTCATTAATT
TGATTTTTTTAATATAAATGTTTATACATTTTTATACAATATATATATAT
ATATATATATATATATATTAGGGTGGTCTAAAAAAATTACTTAAAAAAAT
TTTGTCCTCCTACCATCTAAATTTGTTTTCTAGAGTTTAAAAATAGTTTC
CACATTTATACTTATGAAAAAAAATTATTTTTGAGCCATCCCAAGCAATT
TAAAGTTTTTATTGTACAGAATAACCTACGGTATTTTTCCTATACTATAC
TTATAAGTATTAGTATTATCGCAATTGTAATATTTTCTTATACGACTGTA
TTATTACTATATCAATAAATAAAACATTTTATCTACACCTCTGACAGGGT
TATTCCTATGTATTGTACAGTGTATAACTTATTATACTATGACTATGTAT
TAAAGGTTGATGTACGTCTATTATCATTGTAGAATTATATTTTAGTTGAC
AGTGCGCTGTTTTGATGTTCGTGTCACTCTAATTGTTAATTGTCAGTGTG
CTTTAAATGTGAATCAGTGCTAATTTAATTATACATATATTTATTCAGTA
AATTAAAAATGACAACGCGAAGTAATACTTATATTTATTTAATTGGTCAG
CCTATTTCAACTGTACCAAGTAATCGTTTGCCGTCTAATGGTGAAGTATT
ACGGTTTTTCTTTCATATTTATCGTATTGAAAAAAATTTGTTTAAATATG
CATGCAATAAAGTGATCGAAGAAGTTACATTTGTTTGGAATAAAGCAAGA
ATACCGACAACTCGAAAAGATAATGCTATAAATAAGTTTAAAAAACTTTA
TAATCAATGGCTAAATCTTTTCAAACATAAAAATAGAAAAACAGAGCTTC
ACCGACAACACGAATGTGGGTTTCATATAAAATTGACCAATCTCTTCGAT
ATCGCTGATGCTGATGCTTTAAAAAAAATTAAAATTGATGAAGATAGACA
GTTTTTACTGGCACAACGGATGCCAGGGAGAAGAGGTTTTATGTCTACAG
TGGACGTTTTTACCACGCAAAAAGAGAATCGTAAAGATAAACGAAAAGAA
AAACAACAACTCTATAAAGAAAAAGTTACTAATCAAAATTTGAGTAATTT
TTATGATTTTACATCATTAAGTACAGAAGAAAACCATTCTAGTGATAATA
CTAATTCCGACGATGATTTTATTGTCAATGAAAAAAAATCAAAAAAAGTT
CAAAAAGTAAAAAGAAATTGAAACCTTTGATCACATCAGAATTATCAGCT
GTGCTAGATAGAACTAAGGTCAGTGATCGGCAAGCCACCTTTATCATTGG
AGCTACACTAAAAAGTCTTGGAGAGAATATTGATACGTTTGCATGTAGTC
AAAGTACGATAAAACTACATCGTAAGAAATTAAGGCAAGAAATGGCTAGT
TTTATTAAAGAATCATTTACAATAAACAGCAAATTAACAGTTCACTGGGA
TGGAAAACTGATGTTGGACCTCACTCATTTACAATATGTGGACTGTCTCC
CAGTATTGGTGTCAGGTGGAGATGAAATTAAATTACTGAGTATTAAAAAA
TTATCTTGTTCAACAGGAGAAATGCAGGCACAAACCGTTTTCGATTGTTT
GAGTGAAAAAGAATGGAATTTATACAAAAATATCGTTGCAATGTGTTTTG
ATACAACATTTTCGAATACTGGTAAAAACAATGGGTCATGTGTACTATTA
GAACGTAAACTTGGAAAAAACTTATTTTGGCTTGCATGCAGATATCATAT
TTTTGAATTAGTCATTGGAGCAGCATTTCAAGCAGTGTTACCTTCAGCGA
CAACAGGCCCTGATAACCGAATGTTTGTACGATTTCGATCTTCTTGGTCT
AAAATTGATCATTCTGCATACGTTATAGCAAACTCGGCTATTATTCAAAG
GATTACAGAGAATATACGACATGAACTAGTTAATTTTTGCCAAGAAATGC
TTAAAATAAAACAAGTAAGAGATGATTATCGTGAGATGCTGGAATTATCA
GTTATATTTCTTGGTGAAGAACCTACCAGAGGAATAAAATTTATGACTCC
AGGTGCTACTAGTCATTCACGTTGGATGTCAAAAGTAATTTACTGTTTAA
AAATATTTATGTTTAGTGGACAATTTCATCTAAGTACCAAAGAAAAAAGG
GGCCTCGAGGAAATATGTGTTTTCATTGTAACCGTCCATTTAAAAAATTG
GTTCACTGCAACTTTGGCGGCATGTGCTCCAAATAATGACTTGCAACTGA
TAAAGACCTTAATAAAATATGATAATCCACATATTTCAAAAGCCACTGTA
AAAAAAATGATGGGTCATTTATGGTATTTGTCAGATGAGTTAGTTGGTCT
TTGTCTGTTCGACAAAAATGTCCCTGTTGAAACCAAATGTAAGATAATTT
ACGCCATAAATAATAACCCCTCTCCAGAAGTTCCCAATGTAAGACCGAAA
ATTGACCAACACGATGTAGAAAATTTACAGCTTCATGATTTAGCTAACAA
AAATACAATACAAATTTTCACAGAATTTGGTGTCGATGAATTTTTGAAAA
ATGACGTGGTAAACTGGACCGAGTCTAAAAGCTACTTAAAAGCAGAGGAA
GTTTTTAAGAATCTTCGTGTTACCAATGACGTGGCAGAAAGAGGAGTTTC
ATTGATCCAAGACCTTAATCGCAAAATTACCCATGATGAGGATCAACTTC
AGTTTCTCTTACAAGTAGTTTCTGAGCATCGGAAGATTTACCCTGATTGC
AGCAAACACACTTTAAAAAAAAGCAATTCAACTTTTATATAATTTTTTAA
TTCTTTAGTAAGTAAAATTAGAAATGTTAAAAATGATTTATATAATATAG
CTTGACTTATTGATAAAAAAATATAAGAACGAATACATAAAATAGTTTTC
ATTATTATTTTATTTTTTTTTTTAAGTTAAAAATTTTCAAATAGCTTGGG
ATGGCTCAAAAATTAATTTTTCGTGTTTTTTTTTCTTGAGAATTGTATAT
AAAACCAGGTAGAACAATTTTCAAGTGTAGGAGTATAACATAAAAAAAAA
AATTTTTTTTTTGTCACTTTTAGACCACCCTAATATATATATATATATAT
TGTTAATTTTTTTCTAATATGTAAAAATTCAGTGAATTTCAATTTGGTCT
AGCTAAGTTTAATTTTCATTTTTGTAATGGTCCGGTCCAATCCCTAAGTT
TTAAGAATTAATATTTCTGTTTGGTTTGTTACAGTCAATTCCATAAAAGA
TTCCATATTTATAATACATAGTGATAGTGTCAAGTGTTTTGAAAGGATAC
CAAAATATATTAGATAATAATTAACAGCATTCATTCAATTTTTTACGTCT
AATATTTCTAAGTTAATTTAGTTTTGTTGGTAGTACTTTTTTATAAAAAC
ATTATAATAACGTTTATACGTAGAATTTAGAATGTACAAATCATGAAATC
TTTCTTTTTTCCGTAAGGTATATTGCAATATTTATGTGTCAAGTAATCTA
GTGGTCTTAGATAACAAGCTAAGTAGTGTACTTTATAAATAATCAAGATA
CTGTTTCATTGGATAGACGCATTTGTATAATGTAAATTTGTCAGTTTTAT
TATTAAAATTAACCAACTAAGCTTTTAAACGTCTTATTTATAACATTAAC
ATATTGTTATTTTACAAACATGTTAATAGGTATTAAACAATGTGGCCATA
TCATTAAATTCTTTACACGTGTGTGAAGAATTTGCTAACGCTGTTTGTCG
CATTATGAAAACACATAGTCTTAAAAAGGAAAAGTGTTTGAACATGTTAA
GTGAAAGTATTAAATAATTTAAGTTGATTATAATAAAAAATGATTAAAAT
TCAAATTAAAGTCAATAAATGATTTTCAGTGTAGTGTATCCCTTTTTTAA
CGGATCTCATTCCCCTTTTAAAAAAAAAAAATATTTAAAAACTAGATATT
ATGATATTGATATTATAACTTTAGTTTTATATATAAGGTAAATTTTAATT
ATTTTATGTACAGGCGAAATTTGAACAAAATTTTTGGAGAATCTAACTTA
ATTTTATCTATTATACATTTTTTTAATTTAAATTAACATCTAAATTTCAA
CTTGTTTTAGTAAAAGTGAGGTGCAGCAGAATTAGAGGGCTAAGCCCTCT
CTGGACGTCCCAAATTGTACCTACTTTCCTTTGATTTCGTGATATTATGA
TTTTAGTGTAATAATTTATTTAATATTTTGAATACATTATTTATATATCA
GATTTTAATACAAAAAATATTTTTAATAATCAACGTAAAGGCACATTTTT
ATTAATAACTTTTAGAAAAAAATAACCATTTTATAACCAATAAGATTTAA
AGGAAATGTAAATTTAGTTCATTAATTTCTAAAGGAAACAGTTCCTATCT
TCGTTTTTATAATAATAATTTGTTTCAGGAATCATTTAATTTTGGAATGA
AAGTTCTTACAACACTGATGATTTTGAATTCTTTTAATAGACAGTATTTT
ATTTTATAGTATTTTTGCGTTTGGATTTTCTAATAGATATGCTATGTCTC
TCTAATGATTTTTGTATTTCATTAATTACTTATTTTTTATATTAAAAATG
TATTAGAAGTATTCCAATTGAATTTTAA

Coding sequence (CDS) from alignment at scaffold240:785635..790462+

>DV3009676-RA ID=DV3009676-RA|Name=DV3009676-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=690bp|location=Sequence derived from alignment at scaffold240:785635..790462+ (Daktulosphaira vitifoliae)
ATGAAAGATATACATGAAATATGTGTGCACTACTATAACGGTGGTCTAAA
AAAATTACTTAAAAAAATTTTGTCCTCCTACCATCTAAATTTGTTTTCTA
GAAATAACCTACGTAAATTAAAAATGACAACGCGAAGTAATACTTATATT
TATTTAATTGGTCAGCCTATTTCAACTGTACCAAGTAATCGTTTGCCGTC
TAATGGTGAAGTATTACGTACAGAAGAAAACCATTCTAGTGATAATACTA
ATTCCGACGATGATTTTATTGTCAATGAAAAAAAATCAAAAAAAGTTCAA
AAAAAATTGAAACCTTTGATCACATCAGAATTATCAGCTGTGCTAGATAG
AACTAAGGTCAGTGATCGGCAAGCCACCTTTATCATTGGAGCTACACTAA
AAAGTCTTGGAGAGAATATTGATACGTTTGCATGTAGTCAAAGTACGATA
AAACTACATCTTAAAAATTTTCAAATAGCTTGGGATGGCTCAAAAATTAA
TTTTTCGTGTTTTTTTTTCTTGAGAATTGTATTAAACAATGTGGCCATAT
CATTAAATTCTTTACACGTGTGTGAAGAATTTGCTAACGCTGTTTGTCGC
ATTATGAAAACACATAGTCTTAAAAAGGAAAAGTGTTTGAACATGTTAAG
TGAAATTTTATATATAAGAAGTATTCCAATTGAATTTTAA