DV3018013-RA (mRNA) Daktulosphaira vitifoliae

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	DV3018013-RA
Unique Name	DV3018013-RA
Type	mRNA
Organism	Daktulosphaira vitifoliae (dvitifoliae)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at scaffold570:25980..28530-
coding sequence from alignment at scaffold570:25980..28530-

spliced messenger RNA

>DV3018013-RA ID=DV3018013-RA|Name=DV3018013-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=858bp|location=Sequence derived from alignment at scaffold570:25980..28530- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCACATTGGCTGACAGCCGAACTTTGCAAGTTCATGAGTACGCGGA
GTTCACAGCACAGGTGTCTGACATTGAAGATCAATTCAGAGCCGCGGTAC
TCGACCATCTTATCGATGACGTGTTACTGGGCCATGACTTCTTGGTGAAA
CAAGAAGTGGCATGGGACTACCGAGCATGTACAATCCACATGAGTACAGA
AAGAAGAGCGACGGTATGCTGGAGAAAACCGAACCGAAGATGGTTATCCC
GGAAGGGGAGTTTCCGGAAGATGTCCGATCACCTGATATGGAGGTATCAT
GATCATGTCTCTGCCGGAAATCAAGGATGGAAAGAAACTTACCGGAGCAT
CGGTAATCGTTTCTTCTGGACCGGTATGAGAGAGTCGGTACGTCAATATG
TCGCAAGGTGTCACGTTTGTGCTTACGTTAAACCGTTGAACCGAAAGCAA
GACGACCCAATGCGACCAAGACAGTCCCGCCATCCATGGGAGGTTGCTAG
AATTGATCTTATGGGGCCATACCCAAGATCTCAACGCGGTAAGACTTGCC
TACTTATAGCAACTGACTGCTACAGTAGATGCGTAGAAGCATATCCCCTA
AGGCAAGCCACCGCTAAGACGATTCCCGACATTCTAGAAAGAGAGTTTTT
CTTATGTTTCGGCTATGCTAGAGTACTTCTCTCAGATAATGGAACACAGT
TCGTCTACAAAACAATGGAGAAAGCACTGGAGAACTGGGACACAGAAGGA
TGGACAACGCCAATTTACCATCCAAGAGCAAACCCGGTAGAACGCCGAAA
CCAAGATTTGAAAAAAGGTCTTCGGACAGCTTTGGTTGACAAACCACACA
GTCACTAG

protein sequence of DV3018013-RA

>DV3018013-PA ID=DV3018013-PA|Name=DV3018013-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=286bp
MVTLADSRTLQVHEYAEFTAQVSDIEDQFRAAVLDHLIDDVLLGHDFLVK
QEVAWDYRACTIHMSTERRATVCWRKPNRRWLSRKGSFRKMSDHLIWRYH
DHVSAGNQGWKETYRSIGNRFFWTGMRESVRQYVARCHVCAYVKPLNRKQ
DDPMRPRQSRHPWEVARIDLMGPYPRSQRGKTCLLIATDCYSRCVEAYPL
RQATAKTIPDILEREFFLCFGYARVLLSDNGTQFVYKTMEKALENWDTEG
WTTPIYHPRANPVERRNQDLKKGLRTALVDKPHSH.

mRNA from alignment at scaffold570:25980..28530-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>DV3018013-RA ID=DV3018013-RA|Name=DV3018013-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=2551bp|location=Sequence derived from alignment at scaffold570:25980..28530- (Daktulosphaira vitifoliae)
ATGGTCACATTGGCTGACAGCCGAACTTTGCAAGTTCATGAGTACGCGGA
GTTCACAGCACAGGTGTCTGACATTGAAGATCAATTCAGAGCCGCGGTAC
TCGACCATCTTATCGATGACGTGTTACTGGGCCATGACTTCTTGGTGAAA
CAAGAAGTGGCATGGGACTACCGAGCATGTACAATCCACATGAGTACAGA
AAGAAGAGCGACGGTATGCTGGAGAAAACCGAACCGAAGATGGTTATCCC
GGAAGGGGAGTTTCCGGAAGATGTCCGGTTAGTATTACTCAAGTACCCGA
AGGTTTTCTCCGGAGGAGTCGGGAGGACCCGAGTCATTGAACATGACATC
CGGTTAAAAGAGAAAACTCCGGCTACTTTGAACGCATATCCTTATAATCG
TGTAAAACAGGATACCATCACACGTATGGCGCGAGAAATGGAGGAGCAAG
GTTTTGAAGAACCTAGTACCTCGCCATGGGCAGCTCCCGTAGTTCTTGCC
AAGAAAAAAGATGGATCCCAGCGATTATGCGTGGATTACCGGAGACTGAA
TCTCCAAACAGAATCCGACGCACATCCAATGCCTGACTTACACGAAATGG
TCCGTGGAATGGGTGGCGCTAACGTCTTCAGCACCATCGACCTTAAGTCT
GGCTATTGGCAGGTCAGTTTGACTCAGGAGTCAAGACCACTCACCGCATT
CCGCACACAAATGGGCCTCTACCAATTTAAAGTAATGCCCTTTGGCCTTA
AAAACGCCCCGGCTACTTTTCAACGGTTGGTAAACGAGGTTATGCGTGGA
TATGTCGGTAAATTTGTGTTTGTGTACCTAGACGATATCGTGGTGTACTC
GGTGAATATGAAGAAACACCTCAACCACATACAACGAGTCTTGGAACAGT
TACAAACACATGGGTTGACAATTCAACCGAAATAATGCAGTTTCTGTGTA
AACCGTATAAATTTCCTCGGACACATAGTTGATTCGACGGGAATTGACCG
GGAACCGAAGAAACTAACTGCAATAGCCGAATTCCCCGTACCGAAGAAAG
TCAAAGATTTACAAAAGTTCCTCGGAGTATGCGGTTGGTACAGTTAGTTC
GTGTCANCCTCGGAGTATGCGGTTGGTACAGTCAGTTCGTGTCGAAATAC
ACCGAACTTACCGCTCCGCTGACTAATCTTTTGGCACATGGAATTAAGTG
GCGATGGACGGTACAAGAGCAAGACGCTTTCCAAAAGCTTAAAGAAGTCA
CTTGTCTCTGCGCCCCGACTCTGTCCCCCAATTCAAGGACAACCGTTTTA
TGTTCAAACGGACGCAAGTGAAATAGGAGTCGGTGCCGTACTATTTCAGC
GGGAAGAAACCGGGCAGAGAAGGATTATCTCATATGCCAGCCGAAAACTT
TCTCCCGCTCAGACACGGTATTCAGCCGTAGAACGTGAGTGTCTAGCCAT
TGTATGGGCCGTTGATCGCTTCCGACCATACCTAGACGGAAAATTTACTT
TGCTCACGGACAGCATAGCGCTTAAGTGGTTACACCACACGCGGGACACC
AACAGTAAGTTGACCCGCTGGGCGTTACAGCTGAATGCGTTCGACTTTGA
TATTCAGCACGTGCCTGGAGTTGAAAATCAAGCAGCAGATGCCCTATCAA
GAGGCCCTGTGGAGAAAACTCCGGTAGATGAAGAGCAACTAGAAAGAAAC
TACCATGATCCACCATTGACCGGAGATTTATCCGAACAAAGTCAATTAGG
GGCTATAAAAAAGGATATTCACCCGGATAATATAGCTATTTCCGACATTA
AAACCTGGCAAACCGAAGATGCAATTTTGGCCCAGTATGTCCGGAAAGTC
CGGAGAGACGAACCAATTTACCGACGCTTACACCAGGAATATAACTTGCA
AGATGGTATTTTGCTAAAAGAAGCGGTAAATAACGGAACGGACGGAAAAA
TTATCGTCGTGACATTTCAGATCACCTGATATGGAGGTATCATGATCATG
TCTCTGCCGGAAATCAAGGATGGAAAGAAACTTACCGGAGCATCGGTAAT
CGTTTCTTCTGGACCGGTATGAGAGAGTCGGTACGTCAATATGTCGCAAG
GTGTCACGTTTGTGCTTACGTTAAACCGTTGAACCGAAAGCAAGACGACC
CAATGCGACCAAGACAGTCCCGCCATCCATGGGAGGTTGCTAGAATTGAT
CTTATGGGGCCATACCCAAGATCTCAACGCGGTAAGACTTGCCTACTTAT
AGCAACTGACTGCTACAGTAGATGCGTAGAAGCATATCCCCTAAGGCAAG
CCACCGCTAAGACGATTCCCGACATTCTAGAAAGAGAGTTTTTCTTATGT
TTCGGCTATGCTAGAGTACTTCTCTCAGATAATGGAACACAGTTCGTCTA
CAAAACAATGGAGAAAGCACTGGAGAACTGGGACACAGAAGGATGGACAA
CGCCAATTTACCATCCAAGAGCAAACCCGGTAGAACGCCGAAACCAAGAT
TTGAAAAAAGGTCTTCGGACAGCTTTGGTTGACAAACCACACAGTCACTA
G

Coding sequence (CDS) from alignment at scaffold570:25980..28530-

>DV3018013-RA ID=DV3018013-RA|Name=DV3018013-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=858bp|location=Sequence derived from alignment at scaffold570:25980..28530- (Daktulosphaira vitifoliae)
ATGGTCACATTGGCTGACAGCCGAACTTTGCAAGTTCATGAGTACGCGGA
GTTCACAGCACAGGTGTCTGACATTGAAGATCAATTCAGAGCCGCGGTAC
TCGACCATCTTATCGATGACGTGTTACTGGGCCATGACTTCTTGGTGAAA
CAAGAAGTGGCATGGGACTACCGAGCATGTACAATCCACATGAGTACAGA
AAGAAGAGCGACGGTATGCTGGAGAAAACCGAACCGAAGATGGTTATCCC
GGAAGGGGAGTTTCCGGAAGATGTCCGATCACCTGATATGGAGGTATCAT
GATCATGTCTCTGCCGGAAATCAAGGATGGAAAGAAACTTACCGGAGCAT
CGGTAATCGTTTCTTCTGGACCGGTATGAGAGAGTCGGTACGTCAATATG
TCGCAAGGTGTCACGTTTGTGCTTACGTTAAACCGTTGAACCGAAAGCAA
GACGACCCAATGCGACCAAGACAGTCCCGCCATCCATGGGAGGTTGCTAG
AATTGATCTTATGGGGCCATACCCAAGATCTCAACGCGGTAAGACTTGCC
TACTTATAGCAACTGACTGCTACAGTAGATGCGTAGAAGCATATCCCCTA
AGGCAAGCCACCGCTAAGACGATTCCCGACATTCTAGAAAGAGAGTTTTT
CTTATGTTTCGGCTATGCTAGAGTACTTCTCTCAGATAATGGAACACAGT
TCGTCTACAAAACAATGGAGAAAGCACTGGAGAACTGGGACACAGAAGGA
TGGACAACGCCAATTTACCATCCAAGAGCAAACCCGGTAGAACGCCGAAA
CCAAGATTTGAAAAAAGGTCTTCGGACAGCTTTGGTTGACAAACCACACA
GTCACTAG