Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.95 |
| QI | 0|0|0|0.33|0.4|0.66|6|0|108 |
| eAED | 0.95 |
| Full name | DV3020663 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3020663-RA ID=DV3020663-RA|Name=DV3020663-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=327bp|location=Sequence derived from alignment at scaffold1073:70005..73191- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGTATACAAACCAAATTTCGAAAAATGTATTGCAACTCTATACTTATTG
GGTAGCTAGTCTCGTTGCTAATGTCTTTGTTTTAACAAACATCGCGCCGG
CAGACAGAGTAAAGGTTGCAACTAGACATTGTTCTAGAATTAGAGTGTTT
AGAATCAATCACAATGTAAATCGTATACGTAGTGCGTTTAATACGGAAAT
CAACACTGGATTACTTAAAATATTATTGTATCACACAGGACTGTATAATG
GAAAACTCAATGACCAAATCTCATTGTTCAACGATTACGACAAAAAAAAA
ACATTATTGGCCAAAAGCTCTCATTAA back to topprotein sequence of DV3020663-RA >DV3020663-PA ID=DV3020663-PA|Name=DV3020663-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=109bp
MYTNQISKNVLQLYTYWVASLVANVFVLTNIAPADRVKVATRHCSRIRVF
RINHNVNRIRSAFNTEINTGLLKILLYHTGLYNGKLNDQISLFNDYDKKK
TLLAKSSH. back to topmRNA from alignment at scaffold1073:70005..73191- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >DV3020663-RA ID=DV3020663-RA|Name=DV3020663-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=3187bp|location=Sequence derived from alignment at scaffold1073:70005..73191- (Daktulosphaira vitifoliae)
ATGTATACAAACCAAATTGTATGATTTATAAAATGTCATAAATTTTGTAA
TATTTTTTGATAAATGTTAGTAATAAAAAAAAATACAGTTGTAAAGTTAA
TGTAAAATAATTTTAATATTTATTTTATTATATTCAACAAAGTTAAATAA
AATAAAGGTCATAAGACATAAGAAATTAAACTTATTAATTTTTTTTTACT
TTTTTAAAGTCGAAAAAGTAATTTTTAAATTTGAGTTAGCTTAAATAGCC
AATTTTTTAGCTTCGATGCGATTTTTTTATATGTAAATACTAATTTTTAA
TAATATTAAAACTTAGAAGTGATAGAAAAAGTCTAATTGCAGATTTGAAT
ACATCGCGAAAAGTTGATTGTAATATTATATTATTACATATAATATTAAC
ATATAATATGATGTTATCATTTGTACATGTATGTCACATATCATGATTAT
ACAAGATCACCAAAACAGGGTTCTCTTATTTAAGATACAAAATAACCCTT
TAATTATACAATAAAATCTCCCTCTTGTAGAAATTATTAAGTAACGCCTA
CACGCAGGGACCCTCTTTTAATTAACCAATTACAATACAAAGCCTCAGCT
TCTAGGATCACGGTAGAGATCGCTGGGCTATCCCCTTCACACTATAAAAA
GCCATTTTTCCCCATCTAAACCAGTTCTTTTGACGATTTTAAAATACACA
AAATCTACGACACTCTACTCAAGATTTCACTCTCCGGGACTTAGTCGATT
TTTTAATTAATTTGGACTTAGAATATTTTTCTTTAAAACTAAATGACACT
TAGAAATTTTAAAGTGAATTTTGTTTTGGTGAATCTTTTAATTTAATTTA
ATTTGTTCAATCATTAATAATATTTTATTTTTCTTGTTATGAAAATAAAC
ATCAAATAATATTTTAAACATTATATTTTTTTTAAATTATTTTATTTTAA
TAATAAATCCAACCTAAATTTAGATATTCATTTAATAATAAAAACTTATT
GTGAGCTTTTCTTATTGGGTAGCTAGTCTCGTTACTAATGTCTTTGTTTT
AACAAACATCGCGCCGGCAGACAGAGCTAAAGGTCACAATCTTCTCAATT
TAAATTGAGATTTAAATTTATTTGACTAAGTGTATTGCAACTCTATACTT
ATTGGGTAGCTAGTCTCGTTGCTAATGTCTTTGTTTTAACAAACATCGCG
CCGGCAGACAGAGTAAAGGTTGCAACTAGACATTGTTCTAGAATTAGGTA
TATTAGGTTAGAATATATTTGTAAGCCTATGCGTATTGGGTAGCTAGTCT
CGTTGCTAATGTCTTTGTTTTAACAAACATCGCGCCGGCAGACAAAGTAA
AGGTTGCAACTAGACATTGTTCTAGAATTAGGTATATTAGGTTAGAATAT
ATTTGTAAGCCTATGCGTATTGGGTAGCTAGTCTCGTTGCTAATGTCTTT
GTTTTAATAAACATCGCGCCGGCAGACAACGTAGAGAAACTTACGAATAT
ATTTGCAGTGTTTAATTTTTGTCTTGGTTATTATTGTGCCGCATCCTTTC
AAGGTGCTTTATTTTAGCACCGGGACACATTGGGCCACCACAATTCTGCC
TTGATAAATTTTTTACATAGATATAGATATTTCTGAATCTTGTTTTGGCC
AGGCCAGAGGAAAATTTAAGAAATATTGGTATCGGTCTCTCAATAAAATA
TACTCTCTAAAAAATACTTATTCAACAGACGTAAAACAAATCAATAAGTA
AAGAAAATTAAAATTGTATTTATAATAAAATACAGAGTGTTTAGAATCAA
TCACAAGTAAGACCAGTTGTAGACTTTGTGTAATTAAATCATATTATTTA
AAGTCTTGAGTCGTTTTTTGTAATCAATTATATAGACTATATTACATATA
GTGTAAANGTTTTTTGTAAGCAATTATATAGACTATATTACATATAGTGT
AAATCGTATACGTAGTGCGTTTAATACGGAAATCAACACTGGATTACTTA
AAATATTATTGTATCACACAGGACGTAAGTACAATTTAACCTATGCTTTC
GAACTTCCAACAATCTATTGCGTGATAAACCATTAATAATTAATGAGAGA
AACAATTAATGAGAAAATTAATTTAAATAAAATTGAAGACAATTAAATCT
ACATTAAAATTACAAAAACTTATAACAAATAATGATTACAATAATTTACT
AAGAGCAACCATAATTTTCCTTTCACTCTCTCTAATTTTCTATCACTCTC
TTTTTCTTTTCTTTCTTTTTATTTTTGGTTTATTACATGATTTAGAATGG
TATATTTTTGTTACTGATGAANAAAAGTTGATTTAGAATGGTATATTTTT
GTTACTGATGAAAGTTCCTTGTAGTTCAGTGCATTTATTTATAGTAACAA
ACAGTTTTTATTGAAATTTATTGTATCAAGCCCTTAAAATTTTTATACAC
GTAAAAATAAAGCAAAATACAACTTCTTTATTATTTTTATAATTTCTTCG
TGTAAATTATAATATTACATTATTGAATATCAATTTCATACTAAATTTAA
TAATTATAATTAGTATTTATTCATATATTATATTTTAAAATCAAAGAACT
ACTAATCAGGATATAATTAAAGAAATAAGAGTTGATGTTGCTTTTGGAAT
AATCCACCAATTTCTCTAAATGAAACACTATCTAATGATTTGCATCGAAG
CGTTTCTTATGATAGTGATTTTAATCACTGTCAGATATCATCTATACTTG
TCCCATCTATGCCTTGTCTACACTGTGCCTCGACCCCACTGTGCTACCGT
TTTTTTAAATAATTTTTCACCGTAATTATATTTTTCGCGGTTATTATAAT
ATTAAATTAGAAAAAATAAATTATATATAGTTTTAATAAAATGAATTGTT
GTTATGAATATAATTATATCATAATATAATTATTTTAAACCTAATACAGT
TTTAGTATAAATTGTAATTTAAGCCATACAATTCATTTTTTTTTTTACTT
AAAATATCTTTTTAATTCAATTTTTAGTCTATATTATGAATTACATTAGA
CAACTATAACTCACAAATTTTTAATCAAATTTACGTTCAATTTAATTTTA
GTGTATAATGGAAAACTCAATGACCAAATCTCATTGTTCAACGATTACGA
CAAAAAAAAAACATTATTGGCCAAAAGCTCTCATTAA back to topCoding sequence (CDS) from alignment at scaffold1073:70005..73191- >DV3020663-RA ID=DV3020663-RA|Name=DV3020663-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=327bp|location=Sequence derived from alignment at scaffold1073:70005..73191- (Daktulosphaira vitifoliae)
ATGTATACAAACCAAATTTCGAAAAATGTATTGCAACTCTATACTTATTG
GGTAGCTAGTCTCGTTGCTAATGTCTTTGTTTTAACAAACATCGCGCCGG
CAGACAGAGTAAAGGTTGCAACTAGACATTGTTCTAGAATTAGAGTGTTT
AGAATCAATCACAATGTAAATCGTATACGTAGTGCGTTTAATACGGAAAT
CAACACTGGATTACTTAAAATATTATTGTATCACACAGGACTGTATAATG
GAAAACTCAATGACCAAATCTCATTGTTCAACGATTACGACAAAAAAAAA
ACATTATTGGCCAAAAGCTCTCATTAA back to top
Synonyms
The feature 'DV3020663-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold1073-snap-gene-0.66-mRNA-1 |
|