Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.10 |
| QI | 43|-1|0|1|-1|0|1|0|57 |
| eAED | 0.28 |
| Full name | DV3024105 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3024105-RA-exon | DV3024105-RA-exon-1 | Daktulosphaira vitifoliae | exon | scaffold10312 29..242 + |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3024105-RA-five_prime_UTR | DV3024105-RA-five_prime_UTR-2 | Daktulosphaira vitifoliae | five_prime_UTR | scaffold10312 29..71 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3024105-RA-CDS | DV3024105-RA-CDS-1 | Daktulosphaira vitifoliae | CDS | scaffold10312 72..242 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3024105-RA ID=DV3024105-RA|Name=DV3024105-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=214bp|location=Sequence derived from alignment at scaffold10312:29..242+ (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
CTGCTTGCAATCAAAACAAATTCCTATTGAAAACCTTGTTGGAATGGCTA
GTGATGGAGCAAACATGATGGTGGGAAAAAACAATTCTTTTTTTTCACAT
TTGAAGAAAGATTGCCCAAATATAGTTCTGATGCAATGTATATGTCATTC
AGCGGCTTTAGTTGCAAGCAAGGCAACAGAAAAATTACCTAGGTCTCCTG
AAGATTTAATTAGA back to topprotein sequence of DV3024105-RA >DV3024105-PA ID=DV3024105-PA|Name=DV3024105-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=57bp
MASDGANMMVGKNNSFFSHLKKDCPNIVLMQCICHSAALVASKATEKLPR
SPEDLIR back to topmRNA from alignment at scaffold10312:29..242+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >DV3024105-RA ID=DV3024105-RA|Name=DV3024105-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=214bp|location=Sequence derived from alignment at scaffold10312:29..242+ (Daktulosphaira vitifoliae)
CTGCTTGCAATCAAAACAAATTCCTATTGAAAACCTTGTTGGAATGGCTA
GTGATGGAGCAAACATGATGGTGGGAAAAAACAATTCTTTTTTTTCACAT
TTGAAGAAAGATTGCCCAAATATAGTTCTGATGCAATGTATATGTCATTC
AGCGGCTTTAGTTGCAAGCAAGGCAACAGAAAAATTACCTAGGTCTCCTG
AAGATTTAATTAGA back to topCoding sequence (CDS) from alignment at scaffold10312:29..242+ >DV3024105-RA ID=DV3024105-RA|Name=DV3024105-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=171bp|location=Sequence derived from alignment at scaffold10312:29..242+ (Daktulosphaira vitifoliae)
ATGGCTAGTGATGGAGCAAACATGATGGTGGGAAAAAACAATTCTTTTTT
TTCACATTTGAAGAAAGATTGCCCAAATATAGTTCTGATGCAATGTATAT
GTCATTCAGCGGCTTTAGTTGCAAGCAAGGCAACAGAAAAATTACCTAGG
TCTCCTGAAGATTTAATTAGA back to top
Synonyms
The feature 'DV3024105-RA' has the following synonyms
| Synonym |
|---|
| snap_masked-scaffold10312-processed-gene-0.2-mRNA-1 |
|