Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.70 |
QI | 0|0|0|0.3|1|1|10|0|215 |
eAED | 0.70 |
Full name | DV3004275 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3004275-RA ID=DV3004275-RA|Name=DV3004275-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=648bp|location=Sequence derived from alignment at scaffold25:400725..403865- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGCTTTTAGAACTTATATTCCATATTCTATTCAATGTATTAGAACGTCT AGTGTGTCCAAATGGCTGCGGACGGTCCTATAATTACAGAAAAGGTTTAA GCCATCAGTCCCGTTATGAATATGTTTGGTTAGTTGGTTTATTTCTGTGG AGTTTTTTTACATCTATGGAAAATTTTTATACAAGCCATATTGCTTACTG CATATTTTTACGTTATCTCAAAAGAATAGTTGATTCTTTATTTACATGCC CAAACCAGAACTGTTATAAAAGTTATAAGACTAAAGGTAATCTCATGCGT CATCTTAAATATGAATGTGGCAAATCACCTAAATATGCGTGTCCATATTG TAACAAGAAGAGTTCATTGAAATTCAACTTAAAGAAACATATAGCTGTGA TTCATAATACTGTGGCTAATCCGCTAATACTAAATAATGTTTCAAGTATC ATTATTATTACAATAAAAATTTTATACCAAACGACTTTATTCCGTAGATT AATATGTCCAAATGGTTGTGGACGTTCATACAAGTACAAACAAGGTTTAA ATCAACACACCTATTATGAATGTGGGAAGACACCTATGTATGCTTGCCCA TATTGCAATAAAAAAAGCTATTCTCCAATTTTAAATTTAGAAATGTAG back to topprotein sequence of DV3004275-RA >DV3004275-PA ID=DV3004275-PA|Name=DV3004275-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=216bp
MLLELIFHILFNVLERLVCPNGCGRSYNYRKGLSHQSRYEYVWLVGLFLW SFFTSMENFYTSHIAYCIFLRYLKRIVDSLFTCPNQNCYKSYKTKGNLMR HLKYECGKSPKYACPYCNKKSSLKFNLKKHIAVIHNTVANPLILNNVSSI IIITIKILYQTTLFRRLICPNGCGRSYKYKQGLNQHTYYECGKTPMYACP YCNKKSYSPILNLEM. back to topmRNA from alignment at scaffold25:400725..403865- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >DV3004275-RA ID=DV3004275-RA|Name=DV3004275-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=3141bp|location=Sequence derived from alignment at scaffold25:400725..403865- (Daktulosphaira vitifoliae) ATGCTTTTAGAACTTATATTCCATATTCTATTCAATGTAAATAATAGACT
GGATTAGAGTTCTTACACTATTTTTATATTTTGTCCATATTGCTATGATA
GCTACCATATATTAGTGTAAAAAACTATAGACATTTTTATAAAAATACTA
AATTTTCCAATTTGAAAGCTTAAAATTTAGGTAAAAATCAATTTTTTGTT
TATTTTCACATCTTAAATCACAGATATTTTAATATAGGTATTAGGTATTA
AGACTTCCAATATAAAACAAAATTATTTTTAAAAAAAAGTAGTATAATGT
TATATATTTTTTATTTCAAAAAGTTTTTTTACGTTACAATTTATTCAATT
AAAAATAAATAAATTCTTTATGATATTATTAATTTGTCTTATCTTTTTAT
TTTTAGAACGTCTAGTGTGTCCAAATGGCTGCGGACGGTCCTATAATTAC
AGAAAAGGTTTAAGCCATCAGTCCCGTTATGAATATGGTAATTCGTCCAT
ATGAGGACAAGCCCTCAATAACAAAAGAAAAGCTCTGTGAAATCAAACTT
AAAAAATACATATTTTAGTTCATAATTGTATAAACACAGATCCTATATTT
ATTTCTAATTTGTAATTTTTTAAAATCTGTACTGAAATTGATAATCTGAC
CTAATTCGAGTAATGTTGCATAATAATTGAACTGTAATTAAAAATAAAGT
AATCGTCAGAATTTTAAAATTATAGTAATCCATGGTACGAAGCTAAATGG
CTAAAATGAGTTTATAATTTAGTTTGGTTAGTTGGTTTAGTTAGTTAGTT
TTATATCTTAAACCATAGATATTATTTTAATATTGAACAAGTTATAATAA
GACTTCCAAAATTAAAAAATGAATTTTTATAGGAAATCTTATAATTTATT
CAATATTAACTAATTTTTAATAAAATGGTACTTGATTTGTTTTTTCATAA
ATTTTGTTTTAATGTTATTCAAATTATTCTCAATATAATGTTTAACACAA
GATATAAAAATAAACAAAAAATTGATTTTTATCTAATCTTTAAACTAACA
AATTGAGTTTTTTTTTTTTTTTTTTTATCAAGTTTCTGTGGAGTTTTTTT
ACATCTATGGAAAATTTTTATACAAGCCATATTGCTTACTGCATATTTTT
ACGTATATAACCTGATAAATGTTAATAACATATGGACTTAGAAATAAATA
TCTTAGTGATTTCCTATATTATGTTTTAAGAAATTAACTAACATCTTAAA
TTTGTTAATAATTTGGAAAAGAGATTAGAAATTCTATGTTTTTTACTAAA
TAGTTATTCTTTAGTACTCTAGTTGATTGTATATTTTTTTTAAAACTTAA
AAAATGCATCTTTTTATTTGAAGTAGTGGCTTGTTTAGCTGTGTACTACA
AACATTTTTTTTTTTAAATTTTCAGGTTATCTCAAAAGAATAGTTGATTC
TTTATTTACATGCCCAAACCAGAACTGTTATAAAAGTTATAAGACTAAAG
GTAATCTCATGCGTCATCTTAAATATGAATGTGGCAAATCACCTAAATAT
GCGTGTCCATATTGTAACAAGAAGAGTTCATTGAAATTCAACTTAAAGAA
ACATATAGCTGTGATTCATAATACTGTGGCTAATCCGCTAATACTAAATG
TATAATTAAGATATGTGTGATGTTTTACTTATTTTACCAGTTTGTTTTTA
TAAAGTTATCTACTAAAATGAAAACGTATTATTATATTACTTTTATATTA
AAATAATAGATTGTATGGAGCAAAATTAAACTTTTCTACTTAATATATTA
AATTTCTATCGGTGAAATCTATATTTTACTGTAAATGATTTAAATTATAA
TTTATACAATTTTGGATTTGGACTCAACACCTCGATTAGAATGTGAAATA
CGATAAGAACTTTATAGGATTGTCTGGCTACTCCAATATAACCATTAAGT
TAAACAATAGTTTTTTTAATTAAGAAATTGAGTTTCTAACGATATTGATA
GGCTAAAATATATAGAACTTCAGAAACTTGATTAGCCCTTTCATCGGGAT
CCAGACTATAATGGTTAATAAAAATTTTGCCATGAACATGAAGTAACAGA
TTAATAAATGGTACATTTTATCAAAAAATAAAATATTCAAGGTCTAATTT
TTAATTTAAAATTATATTTTATTTTCTTTATATGAAGAATGTTTCAAGTA
TCATTATTATTACAATAAAAATTTTATACCAAGTATAAACATACAAAAAA
ATTATTTTTTGAAGACGACTTTATTCCGTATTTTGTGGCGAATAAGGTCC
ATTTGCAATTGTTCATAATGATTGCCAACTAAGAGTTACAGCTAATTGAG
TTTCTTTTCTATTATATAATACATAACGAAATATGATTTGATTTAAGACA
ACTCGAATCTGAACAGAGCCGTAGTAATTATTTCTGGTGCTCTAACCAAA
CTAGATTATATATGCCTTTTCAAAAAAATCTTGCAATTTGTCGAGATTTT
TCCTTTACATGATATTAAAAAAGTAACAAAAAGGTCTTCCATTTTTTTTA
TATATAATGATTACGAAGACATTTTAATTACATACCTCATTGTCATTTTA
TGTTCATAAATAATATTTTAAAATTTCAAAATAAATTAAATTTATCCAAC
ACCACAAGAATCACCTAAAAAAAAATCTAAGACCAAACAAATTCCGATGC
TGATGATCTAAATATAGTTTTAGAAATACCCCCATATCCAAATTTTTTCA
GGTACTTTTTATGATGTTGGGTTAATTTTATTTATTCTTAATTAATTAGT
CTTTAAAAATCAATTATACTTTTTTCGGGTTTAACTTAATTAATTTTTTT
TTGTCTTTAAAGCTTGTTCACTAATTTTTTTAAAATAAATTATAGTTTTT
TATTTTTTCAGAATTTATTTTCTTATTTTATTTAGGTAGATTAATATGTC
CAAATGGTTGTGGACGTTCATACAAGTACAAACAAGGTTTAAATCAACAC
ACCTATTATGAATGTGGGAAGACACCTATGTATGCTTGCCCATATTGCAA
TAAAAAAAGCTATGTTAAATCGAATCTTAAAAAGCATATTATATTAATTC
ATAAATGCATTAAGTCTCCAATTTTAAATTTAGAAATGTAG back to topCoding sequence (CDS) from alignment at scaffold25:400725..403865- >DV3004275-RA ID=DV3004275-RA|Name=DV3004275-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=648bp|location=Sequence derived from alignment at scaffold25:400725..403865- (Daktulosphaira vitifoliae) ATGCTTTTAGAACTTATATTCCATATTCTATTCAATGTATTAGAACGTCT AGTGTGTCCAAATGGCTGCGGACGGTCCTATAATTACAGAAAAGGTTTAA GCCATCAGTCCCGTTATGAATATGTTTGGTTAGTTGGTTTATTTCTGTGG AGTTTTTTTACATCTATGGAAAATTTTTATACAAGCCATATTGCTTACTG CATATTTTTACGTTATCTCAAAAGAATAGTTGATTCTTTATTTACATGCC CAAACCAGAACTGTTATAAAAGTTATAAGACTAAAGGTAATCTCATGCGT CATCTTAAATATGAATGTGGCAAATCACCTAAATATGCGTGTCCATATTG TAACAAGAAGAGTTCATTGAAATTCAACTTAAAGAAACATATAGCTGTGA TTCATAATACTGTGGCTAATCCGCTAATACTAAATAATGTTTCAAGTATC ATTATTATTACAATAAAAATTTTATACCAAACGACTTTATTCCGTAGATT AATATGTCCAAATGGTTGTGGACGTTCATACAAGTACAAACAAGGTTTAA ATCAACACACCTATTATGAATGTGGGAAGACACCTATGTATGCTTGCCCA TATTGCAATAAAAAAAGCTATTCTCCAATTTTAAATTTAGAAATGTAG back to top
Synonyms
The feature 'DV3004275-RA' has the following synonyms
Synonym |
snap_masked-scaffold25-processed-gene-4.47-mRNA-1 |
|