Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107168006 |
| Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
| Product | bolA-like protein 3 |
| Transcript id | XM_015517257.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107168006 |
| Genbank | XM_015517257.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107168006 | gene8647 | Diuraphis noxia | gene | JOTR01000498 44110..48125 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015372743.1 | cds12226 | Diuraphis noxia | CDS | JOTR01000498 47741..47788 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna12657 ID=rna12657|Name=XM_015517257.1|organism=Diuraphis noxia|type=mRNA|length=779bp|location=Sequence derived from alignment at JOTR01000498:44110..48125- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
AGATCAATTCTGTCGTAGAAATTAGAAAATTCAAAACATAGAATGTTTCG
TATTTACTAAGTAGACAAGTAGTAAGTACTTACCTTAGTTACTTTAGTTT
ACTTATTTTACTATCTTAGTCTGAGGCCGTGGTCCGTGCGTTGTATTCTT
GTCTATGAGTTAAATTACCTATTCAAATATTATTAAATATTTCATTTTTT
ACATTTTAGCATTRCATTAGTAATTTATTAATCATTATACTATCTATTTA
TATAAATAAGTAAATGAATTTTAAACAAATAATTGTTTCTGGATTCATTG
CATTCTCTACATAGTTATTTTAAAAAATCTTGTTAAAATGTTTCAAATTA
CAAGACGCAGTGCAAAATTATTTAGTACAAATTTAAATGCTTTAAGAAAA
TATGCAGATAATGTTTCAACTCTAAAAGGCGGCGAAAATATTTTGTATTC
GTCATTACAAAAAAAATTTCCACAAGCCAAAGAAATTAAAATCAAAGATA
TTTCTGGTGGTTGTGGTGCAATTTTTGAAGTATTTATTTCCACAACAGAA
TTCAAGGGAATGAGTATGGTAAAACAACACCAACTTATTAACGAAGTTTT
AAAAGATGAAATTAAGTCAATGCATGGGATACGAATACATACAGAAATAC
CAGTTGAAAATAACAAATAGTATTAATTATGTGTTAAGAAATAAAATAGT
TATTGTAAAATAGAATATGACTTTTATGTTGTATACATATTTTTCACTAT
AGAAATATACTTCATATGTGGAGACATTA back to topprotein sequence of XM_015517257.1 >rna12657 ID=rna12657|Name=XM_015517257.1|organism=Diuraphis noxia|type=polypeptide|length=111bp
MFQITRRSAKLFSTNLNALRKYADNVSTLKGGENILYSSLQKKFPQAKEI
KIKDISGGCGAIFEVFISTTEFKGMSMVKQHQLINEVLKDEIKSMHGIRI
HTEIPVENNK. back to topmRNA from alignment at JOTR01000498:44110..48125- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna12657 ID=rna12657|Name=XM_015517257.1|organism=Diuraphis noxia|type=mRNA|length=4016bp|location=Sequence derived from alignment at JOTR01000498:44110..48125- (Diuraphis noxia)
AGATCAATTCTGTCGTAGAAATTAGAAAATTCAAAACATAGAATGTTTCG
TATTTACTAAGTAGACAAGTAGTAAGTACTTACCTTAGTTACTTTAGTTT
ACTTATTTTACTATCTTAGTCTGAGGCCGTGGTCCGTGCGTTGTATTCTT
GTCTATGAGTTAAATTACCTATTCAAATATTATTAAATATTTCATTTTTT
ACATTTTAGCATTRCATTAGTAATTTATTAATCATTATACTATCTATTTA
TATAAATAAGTAAATGAATTTTAAACAAATAATTGTTTCTGGATTCATTG
CATTCTCTACATAGTTATTTTAAAAAATCTTGTTAAAATGTTTCAAATTA
CAAGACGCAGTGCAAAATTATTTAGTACAAATTTAGTAAGTGAAATATAC
ATAACTAATTTATTATTACCACTGACGAACAAATCATTAACAATTTCTAA
ACTATATTTATATTTTTAATTGTATAGAATGCTTTAAGAAAATATGCAGA
TAATGTTTCAACTCTAAAAGGCGGCGAAAATATTTTGTATTCGTCATTAC
AAAAAAAATTTCCACAAGCCAAAGAAATTAAAATCAAAGATATTTCTGGT
AATTATATAACATTATGTTAAATCTGAAACATGAATTTTGCATCACTATT
TTTTTGTGATTTATTCTTTAAAATCAAAAATTAATATAAGATTTTTTAGC
TTGAATTGGATTTTTTTCCACAGTCAACATTTGTATAGAATCACAATTTA
ATTTTTACCCACTATATTATTAATAATTTTAYTGATTGTTCAGTACTGCA
AAGTGTTATTATTGTTCTCTTTTTATAGTCAGTATTTATATATATATATA
GTATATATAGTAATTTCTAATATCTAAAACTAACTGCAAATACAAATTTT
TATAGCCATACAGGAACTGTAAAGAAAATCTTAACATCAATATTCAGTTT
TTCAGTATGCTAAGCTTATGACTTATGAGATACCATAGTTAAACCAACTC
TCTGTAATCATACTATTTACACCACCAGAAGAAAAATTCTGGCTACGCCA
CTGGCTTTTGTTATTATTAATTATATATTTTTTTAATGACTTAAGTTAAT
ATTATGTGATACATAATTTTAGCATCAACATTGGTATGAGAAATTCAAAG
AAGATTAATACAAATTATCATTTTTCAATAATTTGTACTAATTTTTTATT
TTCTTCAAAAAATGCTTATTGCCTAATATTAATGTTTTAGATTCTGAGCG
GAGCGATGAATGTATTGATTTTACCAGGATGTGTGTTTTTTTTTGTGTCT
GTCATCACGTTTTGGGGCAGTAAAAATGCTTCGATTTTTGACTTCAGTAC
CTCGTTCGATCAGAAAGTGAATCTAGTTGGTACTTTGGGGGGTCAAAAGT
AAACAATTCTTAATACTTTTCTAAATAATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTTTACCAT
AAAATATTTGTCACTTAATAATTACCTATATAATTAAAAGAAATCAAATT
ATTATATTCTATAAATCTTTTACATTTTAAATTTAATTTATATAAACTAA
TTTAAATTATTTTTAGGTGGTTGTGGTGCAATTTTTGAAGTATTTATTTC
CACAACAGAATTCAAGGGAATGAGTATGGTAAAACAACACCAACTTATTA
ACGAAGTAGGTATTTACGTAACAATCATTGATATTAATTATAAACTAATC
ATGTATACAAAAAAAAATTCTAAAAGGCGTGTATAATAAGTAAATTAAAT
TTCAAATTAATCTTAAATAGCCTTGTTGAAAACATTTTTTTTTTTAAAGT
ATTCGGATGGTTAAACCCAAATCCCTGTCCTCTTTATACTTTTCAAAGTA
TTTTAATTAATTTTAGTATCAATAATTTGGTTATTAATGACCTTAAACTT
TTTTTTGTTATGGAAAACTCCATTTTTTTTACTAAAAAATCTTGTTTTTT
ATTTCAAAAGAAAATTATTAGAACTCACAAGTTACTCGCCAAATTTAGTG
TTTGAAATATTATGGTTCTTAACCTAGGTATATTTCTTATTCATTTCAGA
CATTTTAAATTTGATTCAACAATTTACATTTGGTTTACTTAAAGTTAATT
ATAACAATTAATTTTTATACTGTTTGTTTCAGGTTTTAAAAGATGAAATT
AAGTCAATGCATGGGATACGAATACATACAGAAATACCAGTTGAAAATAA
CAAATAGTATTAATTATGTGTTAAGAAATAAAATAGTTATTGTAAAATAG
AATATGACTTTTATGTTGTATACATATTTTTCACTATAGAAATATACTTC
ATATGTGGAGACATTA back to topCoding sequence (CDS) from alignment at JOTR01000498:44110..48125- >rna12657 ID=rna12657|Name=XM_015517257.1|organism=Diuraphis noxia|type=CDS|length=333bp|location=Sequence derived from alignment at JOTR01000498:44110..48125- (Diuraphis noxia)
ATGTTTCAAATTACAAGACGCAGTGCAAAATTATTTAGTACAAATTTAAA
TGCTTTAAGAAAATATGCAGATAATGTTTCAACTCTAAAAGGCGGCGAAA
ATATTTTGTATTCGTCATTACAAAAAAAATTTCCACAAGCCAAAGAAATT
AAAATCAAAGATATTTCTGGTGGTTGTGGTGCAATTTTTGAAGTATTTAT
TTCCACAACAGAATTCAAGGGAATGAGTATGGTAAAACAACACCAACTTA
TTAACGAAGTTTTAAAAGATGAAATTAAGTCAATGCATGGGATACGAATA
CATACAGAAATACCAGTTGAAAATAACAAATAG back to top
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