Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107168018 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein |
| Product | uncharacterized LOC107168018 |
| Transcript id | XM_015517272.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107168018 |
| Genbank | XM_015517272.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107168018 | gene8665 | Diuraphis noxia | gene | JOTR01000500 242350..243627 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015372758.1 | cds12249 | Diuraphis noxia | CDS | JOTR01000500 242350..243627 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id112416 | id112416 | Diuraphis noxia | exon | JOTR01000500 242350..243627 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna12683 ID=rna12683|Name=XM_015517272.1|organism=Diuraphis noxia|type=mRNA|length=1278bp|location=Sequence derived from alignment at JOTR01000500:242350..243627- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
ATGCCAGTGGGAAGCCGTGTACAGAAAGTTCAAGAGGTAAAGTTGTGTTT
CAACTGCTTTTCAAACATGCATATGGCGGATGTGTGCAAGTCAAGGTACA
GCTGCCGCGTGTGTAATGGTAGACACAATACGCTACTACACTACGAAAGG
CAAGAACCTCAAGCCATCGTGAATGAAGAAGCTGCCACCGAAAAGGTAGA
CAATCCTAGCGCGAAGGTGTTTTGTGCAGCTCAAAGAGTTAATCATGTCT
TTCTAGCAACCACTATAGTCTCAGTACTGGACCGTTATGGGGAAAAAAGA
CCATGTAGAGTAGTATTGGATAGCGGGTCGCAAATTAACTTTGTCTCGAG
GAAAATGGYTAAGCTGTTAAATCTTGCTCGCAAGAAAGTCGAACTACCAG
TAACTGGAATAGGAGCTAACCGGATTCATTCAACTGCGTGCGTTACCATA
GATGTATTATCCAGAATAAAGGAATTTCAATTTGCTTTAGTTTGTCACGT
TCTACCTACCATTGTAGATGACCTTTCGCCTCATGCGAGTGGTAAAGCCG
ATTGGAATTTACCAAAGGAATTAAATTCACAGCTGGCTGATCCATTAYTT
CATTCATCAGGACCGATAGACATGCTGATAGGAGGTGGCGTCTTTTTCGA
CATACTGGAAACTAGAYGTATCCGTTTAGGCACAGGATCGCTGTGTTTGC
AAGATACCAAATTTGGTTGGGTCATTACCGGAGAAGTTGGAGCAGTATGC
CTGTTAAACGTTACATCTGTCGGCCAGTCACTAGAAGATGGATGGGTTGC
CATAGAAAATAGCAAAGACGTTAATTGCTATTTGTCTAAATCAAACAAAA
GGAGTCTGGAAGAAAGGGAAGCAGCAAGACACTTTCAAGAGACTGCAAAA
CGCGACCAAGATGGTAGATTCGTGGTACGGTTACCGTTAAAATCCGAAGT
AACGAATTTAGGAGACTCTCTGAGGATGGCGACATCAAGGTTTTTAAGCG
TGGAACGTAGACTACAGCAGGATGAATCCTTGAGAGAAGCATATGTCAGC
TTTATGAAAGAGTACAAAAACGCAGGTCATATGCACGAGCTAAACAAYAA
TGAACAGGTAACCAATAACCTTTTTTATTTACCTCACCACCCAGTTGTAA
AATTGTCAAGTTTAACAACGAAGTTACGTGTCGTCTTTGATGGGTCGGCC
AATAGTTCAACTGGAGTCTCACTGATTATGTCCTTATGTGTGGGCCTACA
GTACAAGAAGAACTATTCAGCATATTGA back to topprotein sequence of XM_015517272.1 >rna12683 ID=rna12683|Name=XM_015517272.1|organism=Diuraphis noxia|type=polypeptide|length=426bp
MPVGSRVQKVQEVKLCFNCFSNMHMADVCKSRYSCRVCNGRHNTLLHYER
QEPQAIVNEEAATEKVDNPSAKVFCAAQRVNHVFLATTIVSVLDRYGEKR
PCRVVLDSGSQINFVSRKMXKLLNLARKKVELPVTGIGANRIHSTACVTI
DVLSRIKEFQFALVCHVLPTIVDDLSPHASGKADWNLPKELNSQLADPLX
HSSGPIDMLIGGGVFFDILETRXIRLGTGSLCLQDTKFGWVITGEVGAVC
LLNVTSVGQSLEDGWVAIENSKDVNCYLSKSNKRSLEEREAARHFQETAK
RDQDGRFVVRLPLKSEVTNLGDSLRMATSRFLSVERRLQQDESLREAYVS
FMKEYKNAGHMHELNNNEQVTNNLFYLPHHPVVKLSSLTTKLRVVFDGSA
NSSTGVSLIMSLCVGLQYKKNYSAY. back to topmRNA from alignment at JOTR01000500:242350..243627- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna12683 ID=rna12683|Name=XM_015517272.1|organism=Diuraphis noxia|type=mRNA|length=1278bp|location=Sequence derived from alignment at JOTR01000500:242350..243627- (Diuraphis noxia)
ATGCCAGTGGGAAGCCGTGTACAGAAAGTTCAAGAGGTAAAGTTGTGTTT
CAACTGCTTTTCAAACATGCATATGGCGGATGTGTGCAAGTCAAGGTACA
GCTGCCGCGTGTGTAATGGTAGACACAATACGCTACTACACTACGAAAGG
CAAGAACCTCAAGCCATCGTGAATGAAGAAGCTGCCACCGAAAAGGTAGA
CAATCCTAGCGCGAAGGTGTTTTGTGCAGCTCAAAGAGTTAATCATGTCT
TTCTAGCAACCACTATAGTCTCAGTACTGGACCGTTATGGGGAAAAAAGA
CCATGTAGAGTAGTATTGGATAGCGGGTCGCAAATTAACTTTGTCTCGAG
GAAAATGGYTAAGCTGTTAAATCTTGCTCGCAAGAAAGTCGAACTACCAG
TAACTGGAATAGGAGCTAACCGGATTCATTCAACTGCGTGCGTTACCATA
GATGTATTATCCAGAATAAAGGAATTTCAATTTGCTTTAGTTTGTCACGT
TCTACCTACCATTGTAGATGACCTTTCGCCTCATGCGAGTGGTAAAGCCG
ATTGGAATTTACCAAAGGAATTAAATTCACAGCTGGCTGATCCATTAYTT
CATTCATCAGGACCGATAGACATGCTGATAGGAGGTGGCGTCTTTTTCGA
CATACTGGAAACTAGAYGTATCCGTTTAGGCACAGGATCGCTGTGTTTGC
AAGATACCAAATTTGGTTGGGTCATTACCGGAGAAGTTGGAGCAGTATGC
CTGTTAAACGTTACATCTGTCGGCCAGTCACTAGAAGATGGATGGGTTGC
CATAGAAAATAGCAAAGACGTTAATTGCTATTTGTCTAAATCAAACAAAA
GGAGTCTGGAAGAAAGGGAAGCAGCAAGACACTTTCAAGAGACTGCAAAA
CGCGACCAAGATGGTAGATTCGTGGTACGGTTACCGTTAAAATCCGAAGT
AACGAATTTAGGAGACTCTCTGAGGATGGCGACATCAAGGTTTTTAAGCG
TGGAACGTAGACTACAGCAGGATGAATCCTTGAGAGAAGCATATGTCAGC
TTTATGAAAGAGTACAAAAACGCAGGTCATATGCACGAGCTAAACAAYAA
TGAACAGGTAACCAATAACCTTTTTTATTTACCTCACCACCCAGTTGTAA
AATTGTCAAGTTTAACAACGAAGTTACGTGTCGTCTTTGATGGGTCGGCC
AATAGTTCAACTGGAGTCTCACTGATTATGTCCTTATGTGTGGGCCTACA
GTACAAGAAGAACTATTCAGCATATTGA back to topCoding sequence (CDS) from alignment at JOTR01000500:242350..243627- >rna12683 ID=rna12683|Name=XM_015517272.1|organism=Diuraphis noxia|type=CDS|length=1278bp|location=Sequence derived from alignment at JOTR01000500:242350..243627- (Diuraphis noxia)
ATGCCAGTGGGAAGCCGTGTACAGAAAGTTCAAGAGGTAAAGTTGTGTTT
CAACTGCTTTTCAAACATGCATATGGCGGATGTGTGCAAGTCAAGGTACA
GCTGCCGCGTGTGTAATGGTAGACACAATACGCTACTACACTACGAAAGG
CAAGAACCTCAAGCCATCGTGAATGAAGAAGCTGCCACCGAAAAGGTAGA
CAATCCTAGCGCGAAGGTGTTTTGTGCAGCTCAAAGAGTTAATCATGTCT
TTCTAGCAACCACTATAGTCTCAGTACTGGACCGTTATGGGGAAAAAAGA
CCATGTAGAGTAGTATTGGATAGCGGGTCGCAAATTAACTTTGTCTCGAG
GAAAATGGYTAAGCTGTTAAATCTTGCTCGCAAGAAAGTCGAACTACCAG
TAACTGGAATAGGAGCTAACCGGATTCATTCAACTGCGTGCGTTACCATA
GATGTATTATCCAGAATAAAGGAATTTCAATTTGCTTTAGTTTGTCACGT
TCTACCTACCATTGTAGATGACCTTTCGCCTCATGCGAGTGGTAAAGCCG
ATTGGAATTTACCAAAGGAATTAAATTCACAGCTGGCTGATCCATTAYTT
CATTCATCAGGACCGATAGACATGCTGATAGGAGGTGGCGTCTTTTTCGA
CATACTGGAAACTAGAYGTATCCGTTTAGGCACAGGATCGCTGTGTTTGC
AAGATACCAAATTTGGTTGGGTCATTACCGGAGAAGTTGGAGCAGTATGC
CTGTTAAACGTTACATCTGTCGGCCAGTCACTAGAAGATGGATGGGTTGC
CATAGAAAATAGCAAAGACGTTAATTGCTATTTGTCTAAATCAAACAAAA
GGAGTCTGGAAGAAAGGGAAGCAGCAAGACACTTTCAAGAGACTGCAAAA
CGCGACCAAGATGGTAGATTCGTGGTACGGTTACCGTTAAAATCCGAAGT
AACGAATTTAGGAGACTCTCTGAGGATGGCGACATCAAGGTTTTTAAGCG
TGGAACGTAGACTACAGCAGGATGAATCCTTGAGAGAAGCATATGTCAGC
TTTATGAAAGAGTACAAAAACGCAGGTCATATGCACGAGCTAAACAAYAA
TGAACAGGTAACCAATAACCTTTTTTATTTACCTCACCACCCAGTTGTAA
AATTGTCAAGTTTAACAACGAAGTTACGTGTCGTCTTTGATGGGTCGGCC
AATAGTTCAACTGGAGTCTCACTGATTATGTCCTTATGTGTGGGCCTACA
GTACAAGAAGAACTATTCAGCATATTGA back to top
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