Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107170443 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein |
| Partial | true |
| Product | uncharacterized LOC107170443 |
| Start range | . |
| Start range | 192 |
| Transcript id | XM_015520563.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107170443 |
| Genbank | XM_015520563.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107170443 | gene10878 | Diuraphis noxia | gene | JOTR01000959 192..956 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015376049.1 | cds15169 | Diuraphis noxia | CDS | JOTR01000959 192..956 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id138430 | id138430 | Diuraphis noxia | exon | JOTR01000959 192..956 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna15711 ID=rna15711|Name=XM_015520563.1|organism=Diuraphis noxia|type=mRNA|length=765bp|location=Sequence derived from alignment at JOTR01000959:192..956- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
ATGSATTTGATTAGAAATGATGAAGATTTAGTTGCATTAACAGGGATACC
CAGCATGGACAAGTTGTTAAAACTTGTCAATATTGGTGAATTTGTGATAA
AAAGTTTAAATTATAATATCAATTTTTCTCTTGATATTCTTCATAGAATA
GTGTTAGTATTAATGAAGTTAAAACTAAATACATCTTACAAATGCTTGGC
AGTTTTATTTGGTGTTTGTAAAAGTACTTGTACAAATTACTTTTACGAAA
CAATTGATTTGTTATATTTAATTTTAAAACCTTTAGTTTTGTGGCCTTCT
AAATCAAGTATTTCTAAAAATATTCCTAAATGTTTCATAAATTTCACAAG
TACTAGGGTCGTAGTTGATGGAACAGAAACTCCTATCGAAGTTCCAAAAT
GTTTGTCATGTCGAATTAKAACTTATTCTTTTTATAAAGGTAAACATACT
ATTAAATTTATGGTAGGCATTTCTCCAGATGGCCTAATAACTTTTGTTAG
TGATGTGTATGGTGGCAAAGCATCTGACAAACATATATTTGTAGAAAGTA
ATATTTTAGAAAAGTGTGATATTGGTGATGGTGTTATGGCTGATAAAGGT
TTTCTTATTGAAGAGGAATGTTCTAGGGCAGGTGTTAAATTATTTCGTCC
CCCTTTTTTAAAAAAAAATAAACAACTATCTTTTGAAGACGGTACAATGA
ACACTGATATAGCTAGAGCCAGAGTTCATATAGAACGAGCTATTCAAAGA
TTGAAAATATTTCAT back to topprotein sequence of XM_015520563.1 >rna15711 ID=rna15711|Name=XM_015520563.1|organism=Diuraphis noxia|type=polypeptide|length=255bp
MXLIRNDEDLVALTGIPSMDKLLKLVNIGEFVIKSLNYNINFSLDILHRI
VLVLMKLKLNTSYKCLAVLFGVCKSTCTNYFYETIDLLYLILKPLVLWPS
KSSISKNIPKCFINFTSTRVVVDGTETPIEVPKCLSCRIXTYSFYKGKHT
IKFMVGISPDGLITFVSDVYGGKASDKHIFVESNILEKCDIGDGVMADKG
FLIEEECSRAGVKLFRPPFLKKNKQLSFEDGTMNTDIARARVHIERAIQR
LKIFH back to topmRNA from alignment at JOTR01000959:192..956- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >rna15711 ID=rna15711|Name=XM_015520563.1|organism=Diuraphis noxia|type=mRNA|length=765bp|location=Sequence derived from alignment at JOTR01000959:192..956- (Diuraphis noxia)
ATGSATTTGATTAGAAATGATGAAGATTTAGTTGCATTAACAGGGATACC
CAGCATGGACAAGTTGTTAAAACTTGTCAATATTGGTGAATTTGTGATAA
AAAGTTTAAATTATAATATCAATTTTTCTCTTGATATTCTTCATAGAATA
GTGTTAGTATTAATGAAGTTAAAACTAAATACATCTTACAAATGCTTGGC
AGTTTTATTTGGTGTTTGTAAAAGTACTTGTACAAATTACTTTTACGAAA
CAATTGATTTGTTATATTTAATTTTAAAACCTTTAGTTTTGTGGCCTTCT
AAATCAAGTATTTCTAAAAATATTCCTAAATGTTTCATAAATTTCACAAG
TACTAGGGTCGTAGTTGATGGAACAGAAACTCCTATCGAAGTTCCAAAAT
GTTTGTCATGTCGAATTAKAACTTATTCTTTTTATAAAGGTAAACATACT
ATTAAATTTATGGTAGGCATTTCTCCAGATGGCCTAATAACTTTTGTTAG
TGATGTGTATGGTGGCAAAGCATCTGACAAACATATATTTGTAGAAAGTA
ATATTTTAGAAAAGTGTGATATTGGTGATGGTGTTATGGCTGATAAAGGT
TTTCTTATTGAAGAGGAATGTTCTAGGGCAGGTGTTAAATTATTTCGTCC
CCCTTTTTTAAAAAAAAATAAACAACTATCTTTTGAAGACGGTACAATGA
ACACTGATATAGCTAGAGCCAGAGTTCATATAGAACGAGCTATTCAAAGA
TTGAAAATATTTCAT back to topCoding sequence (CDS) from alignment at JOTR01000959:192..956- >rna15711 ID=rna15711|Name=XM_015520563.1|organism=Diuraphis noxia|type=CDS|length=765bp|location=Sequence derived from alignment at JOTR01000959:192..956- (Diuraphis noxia)
ATGSATTTGATTAGAAATGATGAAGATTTAGTTGCATTAACAGGGATACC
CAGCATGGACAAGTTGTTAAAACTTGTCAATATTGGTGAATTTGTGATAA
AAAGTTTAAATTATAATATCAATTTTTCTCTTGATATTCTTCATAGAATA
GTGTTAGTATTAATGAAGTTAAAACTAAATACATCTTACAAATGCTTGGC
AGTTTTATTTGGTGTTTGTAAAAGTACTTGTACAAATTACTTTTACGAAA
CAATTGATTTGTTATATTTAATTTTAAAACCTTTAGTTTTGTGGCCTTCT
AAATCAAGTATTTCTAAAAATATTCCTAAATGTTTCATAAATTTCACAAG
TACTAGGGTCGTAGTTGATGGAACAGAAACTCCTATCGAAGTTCCAAAAT
GTTTGTCATGTCGAATTAKAACTTATTCTTTTTATAAAGGTAAACATACT
ATTAAATTTATGGTAGGCATTTCTCCAGATGGCCTAATAACTTTTGTTAG
TGATGTGTATGGTGGCAAAGCATCTGACAAACATATATTTGTAGAAAGTA
ATATTTTAGAAAAGTGTGATATTGGTGATGGTGTTATGGCTGATAAAGGT
TTTCTTATTGAAGAGGAATGTTCTAGGGCAGGTGTTAAATTATTTCGTCC
CCCTTTTTTAAAAAAAAATAAACAACTATCTTTTGAAGACGGTACAATGA
ACACTGATATAGCTAGAGCCAGAGTTCATATAGAACGAGCTATTCAAAGA
TTGAAAATATTTCAT back to top
|