Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107172013 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein |
| Product | zinc finger MYM-type protein 1-like |
| Transcript id | XM_015522282.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107172013 |
| Genbank | XM_015522282.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107172013 | gene12312 | Diuraphis noxia | gene | JOTR01002272 3343..4178 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id148291 | id148291 | Diuraphis noxia | exon | JOTR01002272 3343..3621 + |
| id148292 | id148292 | Diuraphis noxia | exon | JOTR01002272 3738..4178 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015377768.1 | cds16672 | Diuraphis noxia | CDS | JOTR01002272 3343..3621 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna17281 ID=rna17281|Name=XM_015522282.1|organism=Diuraphis noxia|type=mRNA|length=720bp|location=Sequence derived from alignment at JOTR01002272:3343..4178+ (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
ATGAAAATAATCGAAAAAGAAAAAGCTCATTGGCGGAATGTTTTACTAAG
AGTTCTTGCCGCAATACAGTATTTAGCTAAAAATAATGATGCTTTCCGAG
GATGTTCAGATGTTTTATATGagaaaaataatggtaaatttTTAGGCATT
ATAGAAATGTTGGCGAAATTTGATCCGGTCATCTCTGAACATGTACGTCG
TATTAAAGACAACGAAACGCATGTTCATTACCTTggacataatattcaaa
actcgTTGATTTCCATGATGGCACAggagATCGATTTTGAAAATGAATCT
AGCTGTTctgaaataaaagaatatttcatGGACTTTGTAAATGTTAGCTC
AACTACTGGAATggatttatcaaatattttgattgacaAATTGAAAGAGT
ATGGTCTCAACATACATAACATTCGAGGACAGGCTTACGATAATGGGGCA
AATATGGCAGGTTTATATAAAGGTGTAAAGgctcatattttaaaacaaaa
tccaCGAGCATTTTTTGTCCCGTGTTCAGCACATAGTCTTAACCTCTGTC
TCAAGGATGCTGGAGGAAGTTCTTCTATGGctcaattattttttggaatG
ATTGAAaggatttatgttttattttcagcATCAATAAACAGATGGGAGAT
TTTAAAGAAACATTGTAATAAGCTTTCTATAAAAAWAAATGGACAGAAAC
CCGATGGAACAGTCGTGTAA back to topprotein sequence of XM_015522282.1 >rna17281 ID=rna17281|Name=XM_015522282.1|organism=Diuraphis noxia|type=polypeptide|length=240bp
MKIIEKEKAHWRNVLLRVLAAIQYLAKNNDAFRGCSDVLYEKNNGKFLGI
IEMLAKFDPVISEHVRRIKDNETHVHYLGHNIQNSLISMMAQEIDFENES
SCSEIKEYFMDFVNVSSTTGMDLSNILIDKLKEYGLNIHNIRGQAYDNGA
NMAGLYKGVKAHILKQNPRAFFVPCSAHSLNLCLKDAGGSSSMAQLFFGM
IERIYVLFSASINRWEILKKHCNKLSIKXNGQKPDGTVV. back to topmRNA from alignment at JOTR01002272:3343..4178+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna17281 ID=rna17281|Name=XM_015522282.1|organism=Diuraphis noxia|type=mRNA|length=836bp|location=Sequence derived from alignment at JOTR01002272:3343..4178+ (Diuraphis noxia)
ATGAAAATAATCGAAAAAGAAAAAGCTCATTGGCGGAATGTTTTACTAAG
AGTTCTTGCCGCAATACAGTATTTAGCTAAAAATAATGATGCTTTCCGAG
GATGTTCAGATGTTTTATATGagaaaaataatggtaaatttTTAGGCATT
ATAGAAATGTTGGCGAAATTTGATCCGGTCATCTCTGAACATGTACGTCG
TATTAAAGACAACGAAACGCATGTTCATTACCTTggacataatattcaaa
actcgTTGATTTCCATGATGGCACAggaggtaaaaattaaaataataaag
ttgaaaCAAATGCTAcatatttttctgttattatGGACACCACACCAGAT
ATTAACCACTGTGAACaactttctattataataagaatTGTACAGATCGA
TTTTGAAAATGAATCTAGCTGTTctgaaataaaagaatatttcatGGACT
TTGTAAATGTTAGCTCAACTACTGGAATggatttatcaaatattttgatt
gacaAATTGAAAGAGTATGGTCTCAACATACATAACATTCGAGGACAGGC
TTACGATAATGGGGCAAATATGGCAGGTTTATATAAAGGTGTAAAGgctc
atattttaaaacaaaatccaCGAGCATTTTTTGTCCCGTGTTCAGCACAT
AGTCTTAACCTCTGTCTCAAGGATGCTGGAGGAAGTTCTTCTATGGctca
attattttttggaatGATTGAAaggatttatgttttattttcagcATCAA
TAAACAGATGGGAGATTTTAAAGAAACATTGTAATAAGCTTTCTATAAAA
AWAAATGGACAGAAACCCGATGGAACAGTCGTGTAA back to topCoding sequence (CDS) from alignment at JOTR01002272:3343..4178+ >rna17281 ID=rna17281|Name=XM_015522282.1|organism=Diuraphis noxia|type=CDS|length=720bp|location=Sequence derived from alignment at JOTR01002272:3343..4178+ (Diuraphis noxia)
ATGAAAATAATCGAAAAAGAAAAAGCTCATTGGCGGAATGTTTTACTAAG
AGTTCTTGCCGCAATACAGTATTTAGCTAAAAATAATGATGCTTTCCGAG
GATGTTCAGATGTTTTATATGagaaaaataatggtaaatttTTAGGCATT
ATAGAAATGTTGGCGAAATTTGATCCGGTCATCTCTGAACATGTACGTCG
TATTAAAGACAACGAAACGCATGTTCATTACCTTggacataatattcaaa
actcgTTGATTTCCATGATGGCACAggagATCGATTTTGAAAATGAATCT
AGCTGTTctgaaataaaagaatatttcatGGACTTTGTAAATGTTAGCTC
AACTACTGGAATggatttatcaaatattttgattgacaAATTGAAAGAGT
ATGGTCTCAACATACATAACATTCGAGGACAGGCTTACGATAATGGGGCA
AATATGGCAGGTTTATATAAAGGTGTAAAGgctcatattttaaaacaaaa
tccaCGAGCATTTTTTGTCCCGTGTTCAGCACATAGTCTTAACCTCTGTC
TCAAGGATGCTGGAGGAAGTTCTTCTATGGctcaattattttttggaatG
ATTGAAaggatttatgttttattttcagcATCAATAAACAGATGGGAGAT
TTTAAAGAAACATTGTAATAAGCTTTCTATAAAAAWAAATGGACAGAAAC
CCGATGGAACAGTCGTGTAA back to top
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