Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107161613 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
| Product | ras-related GTP-binding protein C |
| Transcript id | XM_015508096.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107161613 |
| Genbank | XM_015508096.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107161613 | gene264 | Diuraphis noxia | gene | JOTR01000004 1059230..1060258 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015363582.1 | cds388 | Diuraphis noxia | CDS | JOTR01000004 1060160..1060214 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna394 ID=rna394|Name=XM_015508096.1|organism=Diuraphis noxia|type=mRNA|length=713bp|location=Sequence derived from alignment at JOTR01000004:1059230..1060258- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
AAGTTTTTATTCATAAAGTAGATGGACTCACAGAAGATACTAAAATGGAA
ACTCAACGAGAAATTCACCAAAGAGCTAATGATGATCTTGTAGATTCAGG
AGATGAACAAAAAATATATATTAGTTTCCATTTGACATCAATTTACGATC
ATAGCATATTTGAAGCATTTAGTAGAGTTGTGCAAAAGATGATTCCTCAA
TATGCAACTCTTGAAAATTTCCTAAACATTATTATATCGACATCTGGAAT
TGAAAAAGCCTTTTTATATGATGTAAAAACTAAAATATATGTAGCAACTG
ATTCATCACCGGTTGATATTCAAAGTTATGAACTTTGTTGTGATATGATA
GATGTTGTTATAGATTTATCAAATATTTATGGGTTGGGCGATAACCCAGG
ATTAATGAATGATCCAGCTTTTGATGATCAAAGTTCAAGTCTAATTAAAT
TAAATAATGGTACCATTTTATATTTGAGAGAGGTATGCAGTTTTTTGGCA
CTTGTATGTATACTAAGAGAAGATAACTTTGAAAAACAAAGAATTATAGA
TTATAATTTTGTGATTTTACGAAAAGGTATACATAAACTTTTTGAACTAA
AAGTTAAAGAAAAAGAAAGTATTGAACCAAGAAAGCCACCATCATTTAAG
TAGTTAACAATTATTTAATTCTTGTTTGTTAGAATATTATACCTATTACT
AGTTTTACTTTAT back to topprotein sequence of XM_015508096.1 >rna394 ID=rna394|Name=XM_015508096.1|organism=Diuraphis noxia|type=polypeptide|length=203bp
METQREIHQRANDDLVDSGDEQKIYISFHLTSIYDHSIFEAFSRVVQKMI
PQYATLENFLNIIISTSGIEKAFLYDVKTKIYVATDSSPVDIQSYELCCD
MIDVVIDLSNIYGLGDNPGLMNDPAFDDQSSSLIKLNNGTILYLREVCSF
LALVCILREDNFEKQRIIDYNFVILRKGIHKLFELKVKEKESIEPRKPPS
FK. back to topmRNA from alignment at JOTR01000004:1059230..1060258- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna394 ID=rna394|Name=XM_015508096.1|organism=Diuraphis noxia|type=mRNA|length=1029bp|location=Sequence derived from alignment at JOTR01000004:1059230..1060258- (Diuraphis noxia)
AAGTTTTTATTCATAAAGTAGATGGACTCACAGAAGATACTAAAATGGAA
ACTCAACGAGAAATTCACCAAAGAGCTAATGATGATCTTGTAGATTCAGG
TAGTTTTTAGAATGTTAGCTATGATTTAATTGTGAGAGTTAGTGGCCACA
TTAATGATATGTTTTATTAATTAAGTACATTCAATTAAATACTAATTTAT
GTTCTTTAGGAGATGAACAAAAAATATATATTAGTTTCCATTTGACATCA
ATTTACGATCATAGCATATTTGAAGCATTTAGTAGAGTTGTGCAAAAGAT
GATTCCTCAATATGCAACTCTTGAAAATTTCCTAAACATTATTATATCGG
TAATGATAATATTTTTTTTTATTAATATTGATATTTTTGTTTTAAATTCT
TTTTAAATAATTTAATTTCAGACATCTGGAATTGAAAAAGCCTTTTTATA
TGATGTAAAAACTAAAATATATGTAGCAACTGATTCATCACCGGTTGATA
TTCAAAGTTATGAACTTTGTTGTGATATGATAGATGTTGTTATAGATTTA
TCAAATATTTATGGGTTAGTTATTTGATAGTTTTATTAATGAACGGTGTT
CAGTTTAACGTTTAAATGTTTTTAGGTTGGGCGATAACCCAGGATTAATG
AATGATCCAGCTTTTGATGATCAAAGTTCAAGTCTAATTAAATTAAATAA
TGGTACCATTTTATATTTGAGAGAGGTATGCAGTTTTTTGGCACTTGTAT
GTATACTAAGAGAAGATAACTTTGAAAAACAAAGTGAGTTACAAAATGTC
ATACATTTTATTCTACAAAGGGCGAAAAATATATATTAATTTGTTTTTAT
TCTTAGGAATTATAGATTATAATTTTGTGATTTTACGAAAAGGTATACAT
AAACTTTTTGAACTAAAAGTTAAAGAAAAAGAAAGTATTGAACCAAGAAA
GCCACCATCATTTAAGTAGTTAACAATTATTTAATTCTTGTTTGTTAGAA
TATTATACCTATTACTAGTTTTACTTTAT back to topCoding sequence (CDS) from alignment at JOTR01000004:1059230..1060258- >rna394 ID=rna394|Name=XM_015508096.1|organism=Diuraphis noxia|type=CDS|length=609bp|location=Sequence derived from alignment at JOTR01000004:1059230..1060258- (Diuraphis noxia)
ATGGAAACTCAACGAGAAATTCACCAAAGAGCTAATGATGATCTTGTAGA
TTCAGGAGATGAACAAAAAATATATATTAGTTTCCATTTGACATCAATTT
ACGATCATAGCATATTTGAAGCATTTAGTAGAGTTGTGCAAAAGATGATT
CCTCAATATGCAACTCTTGAAAATTTCCTAAACATTATTATATCGACATC
TGGAATTGAAAAAGCCTTTTTATATGATGTAAAAACTAAAATATATGTAG
CAACTGATTCATCACCGGTTGATATTCAAAGTTATGAACTTTGTTGTGAT
ATGATAGATGTTGTTATAGATTTATCAAATATTTATGGGTTGGGCGATAA
CCCAGGATTAATGAATGATCCAGCTTTTGATGATCAAAGTTCAAGTCTAA
TTAAATTAAATAATGGTACCATTTTATATTTGAGAGAGGTATGCAGTTTT
TTGGCACTTGTATGTATACTAAGAGAAGATAACTTTGAAAAACAAAGAAT
TATAGATTATAATTTTGTGATTTTACGAAAAGGTATACATAAACTTTTTG
AACTAAAAGTTAAAGAAAAAGAAAGTATTGAACCAAGAAAGCCACCATCA
TTTAAGTAG back to top
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