Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107164148 |
| Model evidence | Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments |
| Product | UDP-glucuronic acid decarboxylase 1 |
| Transcript id | XM_015511864.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107164148 |
| Genbank | XM_015511864.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107164148 | gene558 | Diuraphis noxia | gene | JOTR01000008 1551616..1556656 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015367350.1 | cds794 | Diuraphis noxia | CDS | JOTR01000008 1556258..1556354 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna815 ID=rna815|Name=XM_015511864.1|organism=Diuraphis noxia|type=mRNA|length=1415bp|location=Sequence derived from alignment at JOTR01000008:1551616..1556656- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
ATAATTATTATTAATATTAATTATATAGCACATTACCTCAAAACTATTTT
ATCAAACAAGTGTGAACGCATTAAAGTATATCTAATAACCGTTGGTGGCT
TAAAATTTATGATGGCTTGACAGTTGACGGATAACAAATGAAAAATGTAA
ATGATAATTAATTATTATAATAAATAATTTATCGTCGGCCGTCGACGTTC
ATTCTGACACACCGTCCCCCCCCGCCATTTATTTGCGTATGGTAACGATA
ACAAATTTTAGCAGTAAAAATTTTGACTACCAATAATGATTGTTATATCA
TTATGTTCCTATCGGACCCGTCCAAGTACAGACATCAAATGTTGATCCGC
ATAAATGTTTTCCTGGCATTGGTAATAGGCAGTAGCCTGCTTTTGTTGGG
AATTATCTATTGTTTTATATCAAATAATAATATATCCAAACATGAATTTC
AAGTATCAAACAAAAAGGAGTTTCAGATTTTTGGAACTGCTGAATCTGAA
GACAATATAGATCTTATTAATAAGCTAAAAAGGGACCTCGCTACCGCAAA
TGARAAAATAGAACAACTTGAAAACAAGATGCAAGGGTTTGAAGAACGTA
TCAAAAAGCCTTATCCAAATGTCAAATATTTAAACTACCGTTCAAAAAAA
CGTATTCTAGTTACTGGTGGTGCTGGTTTTGTTGGATCCCATTTGGTTGA
TAAATTRATGAAAGCGGGTCATGACATTACTGTTGTAGACAATTTTTTCA
CGGGGGTTAAAGCAAATGTTGAACAGTGGATTGGTCATGCTAACTTTGAG
TTAATTCATCAAGACATAGTCAATCCCCTTTTTGTTGAAGTAGATGAGAT
TTATCATTTAGCTTCACCTGCATCACCTCCACATTACATGTTCAACCCAG
TAAAAACAATTAAGACTAATACAATAGGAACAATTAATATGTTAGGACTG
GCAAAACGAGTAGGTGCTAAAGTCTTGATTGCAAGCACTTCTGAAGTCTA
TGGTGATCCTGAAGTACACCCACAACCTGAAACATATTGGGGGCATGTCA
ATCCAATTGGTCCACGTGCTTGTTATGATGAAGGTAAAAGAGTTTCAGAA
ACATTGAGTTATGCATATGCAAAACATGAAAAAGTATCTGTTCGTGTTGC
CAGAATATTTAATACACATGGGCCTCGAATGCATATGAATGACGGACGGG
TAGTTTCCAACTTTATATTACAAGCACTTCGAGATGAGCCGATTACGGTA
TATGGTACAGGTAATCAAACACGTTCATTTCAGTATGTGTCTGATCTAGT
GAATGGATTGATTGCCTTAATGGATTCCAATTATACCCAACCAGTCAATC
TCGGAAACCCAACTGAACATACCATTAACGGTGGGCTTAAAAGAAGGTTT
AAAAATGACWATTAA back to topprotein sequence of XM_015511864.1 >rna815 ID=rna815|Name=XM_015511864.1|organism=Diuraphis noxia|type=polypeptide|length=371bp
MFLSDPSKYRHQMLIRINVFLALVIGSSLLLLGIIYCFISNNNISKHEFQ
VSNKKEFQIFGTAESEDNIDLINKLKRDLATANEKIEQLENKMQGFEERI
KKPYPNVKYLNYRSKKRILVTGGAGFVGSHLVDKLMKAGHDITVVDNFFT
GVKANVEQWIGHANFELIHQDIVNPLFVEVDEIYHLASPASPPHYMFNPV
KTIKTNTIGTINMLGLAKRVGAKVLIASTSEVYGDPEVHPQPETYWGHVN
PIGPRACYDEGKRVSETLSYAYAKHEKVSVRVARIFNTHGPRMHMNDGRV
VSNFILQALRDEPITVYGTGNQTRSFQYVSDLVNGLIALMDSNYTQPVNL
GNPTEHTINGGLKRRFKNDX. back to topmRNA from alignment at JOTR01000008:1551616..1556656- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna815 ID=rna815|Name=XM_015511864.1|organism=Diuraphis noxia|type=mRNA|length=5041bp|location=Sequence derived from alignment at JOTR01000008:1551616..1556656- (Diuraphis noxia)
ATAATTATTATTAATATTAATTATATAGCACATTACCTCAAAACTATTTT
ATCAAACAAGTGTGAACGCATTAAAGTATATCTAATAACCGTTGGTGGCT
TAAAATTTATGATGGCTTGACAGTTGACGGATAACAAATGAAAAATGTAA
ATGATAATTAATTATTATAATAAATAATTTATCGTCGGCCGTCGACGTTC
ATTCTGACACACCGTCCCCCCCCGCCATTTATTTGCGTATGGTAACGATA
ACAAATTTTAGCAGTAAAAATTTTGACTACCAATAATGATTGTTATATCA
TTATGTTCCTATCGGACCCGTCCAAGTACAGACATCAAATGTTGATCCGC
ATAAATGTTTTCCTGGCATTGGTAATAGGCAGTAGCCTGCTTTTGTTGGG
TAAGTCTATGATTCATAATATTATGMATCTGTATCRMATTTTTGAGTGAC
AATAATAATTAAAATTATGAAAAATGTTCTGTGGTCGTTTCTGCTTTTTT
ACTGTTCCGCTATCGTAATCAAAGACTTGGATCCACTCTTTTGTTCTTTG
GAAAGCAAACTAGCTTTTGAAGTGAAAATTATAATTTTGTTTTTTTGTTA
GATTTAGGTACTTATCAGCTTATTTTATATCTATTGTGTCATTGTTGTAA
AACTTTTGTATATTAGTCCTATTTCTTAGGTATTGAATGCAGATGAAATT
AGTTTTATCTATTTAAACTAATATAAACAGTTAATATTTACTTATACAAA
TGTAATATTAAACTTATCATAAAATGTTCAATTATTTTTTGTTTTTTAGC
TTAAAGTTTTTTAAGACTAAAATAATATATTTTTATTCTGTTAATTGCAG
TTTTTATCTTTTATTATGATACATTTATCAACATATAAATCAAAATTTAT
ATAGAAAAATGTAACAAAATATAATTTTTCCATTTTCTTATTTGTGGATT
AATTATACAGCATAGGTATGGTKAGGTACTGGTTTTTATAAAAAACACAT
TATTAAATATTTAGTTTAAATGAAAGTTAAAATATTTGAATTCAAACCAT
ACTTATTATTAATTATTATTTATATTTTAATTATTATTTCAGGAATTATC
TATTGTTTTATATCAAATAATAATATATCCAAACATGAATTTCAAGTATC
AAACAAAAAGGAGTTTCAGATTTTTGGAACTGCTGAATCTGAAGACAATA
TAGATCTTATTAATAAGCTAAAAAGGGACCTCGCTACCGCAAATGARAAA
ATAGAACAACTTGAAAACAAGATGCAAGGGTTTGAAGAACGTATCAAAAA
GCCTTATCCAAATGTCAAATATTTAAACTACCGTTCAAAAAAACGTATTC
TAGTAAGATAAAAATATTATTATGATTGATACATAAATATTATCGTGATT
TTTAAAAGAATTTACCATTTTTAAATTGTATTATTTTATTATTTTCCAGG
TTACTGGTGGTGCTGGTTTTGTTGGATCCCATTTGGTTGATAAATTRATG
AAAGCGGGTCATGACATTACTGTTGTAGACAATTTTTTCACGGGGGTTAA
AGCAAATGTTGAACAGTGGATTGGTCATGCTAACTTTGAGTTAATTCATC
AAGACATAGTCAATCCCCTTTTTGTTGAAGTAGATGAGATTTATCATTTA
GCTTCACCTGCATCACCTCCACATTACATGTTCAACCCAGTAAAAACAAT
TAAGACTAATACAATAGGAACAATTAATATGTTAGGTTTGTAAAAAAAAA
AATCCATTGTTTAAAAGTATCTAGAATAAAAAAGAGAAACAAATGTTAAA
TAATTTATAAATTCTAATACAATTAAAAAAAATACAACATAATTAGATAT
TTCTTGGTTATATTGTGCATTAATTAAAAATAATCAAAGTTTTAAAATGT
AGACTTAAGTTTTAGTTATTATATAGAATTTTTAATGGGATATTAGTATA
CTACATCCGCAAGTGTAATCTCTGTTTTACAAATTTACAACATACAAATT
TGTGTTCAGTCATTACAATTTTGTATTTTTGGCTTTAATATTTTAGTGAA
CTATTCTACTATCAATTTTAAGGTAAGAACATTATATTTGTTCTCACGTT
AATTTTGTTCAACATTTTAATTTTTAAGCTTAAGGTTATTATATTTCAAA
ATTTCAATATTTTAAATACTAATGACTCACTTAGAAATTAAAATATTATA
ATAGCCAAAATGTTCCTTCCTTTAAACTTTATAATTGATTAATTTAATCA
AATTTAAAGCCGTTTACACAAAATTAAAACTTCTGAACTCAAATTTTCTG
GGTTGTTAGTTTGTAAGATAAGAGAACACATGTATATTTTCACAAATGGT
CCAAATATAACTGCTACTAATAATTGTAGCACAATCAATAATTATTTTTA
ATAATACTGTTTCTCTTAGAATATACTCTTATATTCATCATGCATAATAT
ATTAATCTAGGTCATCAAATATGTATRTGAGATATTTTATTTTTTTAAAT
CCTAAAGATTTTTTTTTTGTAGCTTACTATTTATACATCTTAGCGATTTT
AATTTTTTATGAACTAGTATAAATAAGATAATACTAAAAAAATATACTKT
TCTGAATTATCYAAAGTCTAATTATTTTCCAGGACTGGCAAAACGAGTAG
GTGCTAAAGTCTTGATTGCAAGCACTTCTGAAGTCTATGGTGATCCTGAA
GTACACCCACAACCTGAAACATATTGGGGGCATGTCAATCCAATTGGTTT
GTATTCAATATTGTTTAGTAATTTTTATTATATGATTGTTACTTGATGAT
AGCAGTTAGCATATTTATTTGAAAGAATCTTATGGCAAATTAGATTTGAT
AAATATTAGTATTTTTAAATATATAAGCGTAATCCAAAAATATTAAATGC
ATATTTCTATTTTCCCATAYTGTGTAGCTTTTCACACAATTGTGTATATT
TTTAAAATATAGATCTCATTATTTGTTTAATTTTTTAACTGACTAATAAT
TTCAAATATTGTTTTTAACGCATTACATTCTAAGCTTAAGTATAACTATA
ATTATTTTTGTGTGATTTAGGTCCACGTGCTTGTTATGATGAAGGTAAAA
GAGTTTCAGAAACATTGAGTTATGCATATGCAAAACATGAAAAAGTATCT
GTTCGTGTTGCCAGAATATTTAATACACATGGGCCTCGAATGCATATGAA
TGACGGACGGGTAGTTTCCAACTTTATATTACAAGCACTTCGAGATGAGC
CGATTACGGTTAGAAATACATTATAATATAATATGCTCTAATTAATTGTA
AATTATTTTTCCAATTTTTTWAACTTTTGTTTAGGTATATGGTACAGGTA
ATCAAACACGTTCATTTCAGTATGTGTCTGATCTAGTGAATGGATTGATT
GCCTTAATGGATTCCAATTATACCCAACCAGTCAATCTCGGAAACCCAAC
TGAACATACCATTAACGGTAAGTTTTACTATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTGAATT
TATGATCTTTACATTAATTATGAATGTCAAATGAGCATTGTGTACCTATT
ATAGTATGTATTTTAATCTTTTGATCTGATTTATGGCCTTTATCTAAATT
ATTTTCAAAAAATTAATTTTATCCGTTATAATTTACATTATTTTTATTTT
TTACAGGTGGGCTTAAAAGAAGGTTTAAAAATGACWATTAA back to topCoding sequence (CDS) from alignment at JOTR01000008:1551616..1556656- >rna815 ID=rna815|Name=XM_015511864.1|organism=Diuraphis noxia|type=CDS|length=1113bp|location=Sequence derived from alignment at JOTR01000008:1551616..1556656- (Diuraphis noxia)
ATGTTCCTATCGGACCCGTCCAAGTACAGACATCAAATGTTGATCCGCAT
AAATGTTTTCCTGGCATTGGTAATAGGCAGTAGCCTGCTTTTGTTGGGAA
TTATCTATTGTTTTATATCAAATAATAATATATCCAAACATGAATTTCAA
GTATCAAACAAAAAGGAGTTTCAGATTTTTGGAACTGCTGAATCTGAAGA
CAATATAGATCTTATTAATAAGCTAAAAAGGGACCTCGCTACCGCAAATG
ARAAAATAGAACAACTTGAAAACAAGATGCAAGGGTTTGAAGAACGTATC
AAAAAGCCTTATCCAAATGTCAAATATTTAAACTACCGTTCAAAAAAACG
TATTCTAGTTACTGGTGGTGCTGGTTTTGTTGGATCCCATTTGGTTGATA
AATTRATGAAAGCGGGTCATGACATTACTGTTGTAGACAATTTTTTCACG
GGGGTTAAAGCAAATGTTGAACAGTGGATTGGTCATGCTAACTTTGAGTT
AATTCATCAAGACATAGTCAATCCCCTTTTTGTTGAAGTAGATGAGATTT
ATCATTTAGCTTCACCTGCATCACCTCCACATTACATGTTCAACCCAGTA
AAAACAATTAAGACTAATACAATAGGAACAATTAATATGTTAGGACTGGC
AAAACGAGTAGGTGCTAAAGTCTTGATTGCAAGCACTTCTGAAGTCTATG
GTGATCCTGAAGTACACCCACAACCTGAAACATATTGGGGGCATGTCAAT
CCAATTGGTCCACGTGCTTGTTATGATGAAGGTAAAAGAGTTTCAGAAAC
ATTGAGTTATGCATATGCAAAACATGAAAAAGTATCTGTTCGTGTTGCCA
GAATATTTAATACACATGGGCCTCGAATGCATATGAATGACGGACGGGTA
GTTTCCAACTTTATATTACAAGCACTTCGAGATGAGCCGATTACGGTATA
TGGTACAGGTAATCAAACACGTTCATTTCAGTATGTGTCTGATCTAGTGA
ATGGATTGATTGCCTTAATGGATTCCAATTATACCCAACCAGTCAATCTC
GGAAACCCAACTGAACATACCATTAACGGTGGGCTTAAAAGAAGGTTTAA
AAATGACWATTAA back to top
|