Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107165114 |
| Model evidence | Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
| Product | cationic amino acid transporter 2-like |
| Transcript id | XM_015513199.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107165114 |
| Genbank | XM_015513199.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107165114 | gene5990 | Diuraphis noxia | gene | JOTR01000242 20833..39468 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015368685.1 | cds8583 | Diuraphis noxia | CDS | JOTR01000242 21475..21501 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna8861 ID=rna8861|Name=XM_015513199.1|organism=Diuraphis noxia|type=mRNA|length=3001bp|location=Sequence derived from alignment at JOTR01000242:20833..39468+ (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
AGCTATGTCCAACAACGCGGTAACGTAGTTAATCGTGCGGTAACCTTATT
ACCTAACCAACCAATCACAGCAAGGGATTCACGCGAACGTGTATAGTGGA
AACCCACCTTTATTTTCCATCGTTTGCCGGTGTGCCGCTTAAAGAGTACC
AAGGTCCAAGGTATATACTGTCCGGTCGAAGAACACGCGCAGACACTGCT
CGAATTTGTCAGCAGCACATTGCGCGTCCGTTCCCCgcaccaaatattta
ttaatatttatttataccataaCAGTTCGcaaagcataataattaataat
catatagaaACCTCGCATAATCTACATGTAACGTAATCGTATagtgtcat
taatatttttttaacgcttTGTTGCTTCTGTCGACGTTTTTTTAACGTAT
AAGTGTGCATAAATGATAcaacttacctacctatacgcGGTCGAAACGAA
TAACTGTATTGCGGTGTTGATGGACCACATTGtgtgcaatttttaaattt
tttaccataTTTATGCGTATTCCATATACAATTCCTATACGTACGCGGTA
AGCTGTTAGTCGCCTTTACCCGATTTTCCGTTTCAGGCGTTTCACAGAAT
ACGACGATTATCACACTTGTTATACTGATAATATAACACTAAATGATGGA
CGATCCTTGGTACAAATCGACAGATTCGTTGACGTGGGCGTTGACGAGGA
AAAAGACAGATTTGGAtgaatcgaataaaaaaaaactcaataggGTATTG
ACCTTCTTCGACTTGACGGCATTGGGCACCGGCTGCACATTGGGAAGCGG
TGTGTACATATTGGCCGGAACAGTGGCCAAATCGATCGCCGGCCCAGCCG
TAGTCCTGTCTTTTGTCATTGCCGCCGTAGTATCTGCATTTTCTGGACTG
TGTTATGCTGAATTGGCTGGTAGAGTACCCAAAGCTGGATCAGCATACAT
TTACAGTTACGTGGCAGTTGGTGAGTTCACAGCGTTCATCATTGGTTGGA
ATCTAATCGTCGAATATCTCATTGGAACCGCGGGCACGGCTAAGGCCATG
AGTAATTACTGTGATTCTTTGCTGGGCAATCCGCAGAAAAGATACATGAC
CAAATATTTTCCCATACACATCAGCTTCTTAGGCGATTATCCTGACTTAA
CATCATTCTTTGTGATTGTCATCATAGCACTATTGGTAGCTTGGGGTGTT
CGTGAATCGTCGATTACCAACAACATATTTACTGCATTAAATCTTATTAC
CGTTTGCACCGTGATTGTCACTGGGTGTTACAAAGCTAATATATCAAACT
GGTCTATTCCAAAAAGCGAAATACCACCTGAAGTAAAAGGCGGCGAAGGC
GGATTTTTACCATTCGGATGGGTCGGTGTTGCAACGGGAGCTGCGAAATG
TTTTTACGGATTCATCGGTTTTGATTCGATTGCCATGACTgGTGAAGAAA
CAAAAAATCCCAAAAGAGACATACCGCTGGCGATCGTCGCTTCTCTGTTC
CTGAGTACGATCGCTTATTGCGGCGTGGCCATCGTTTTGACACTCATGTG
GCCTTACTTTTTGATGGATGCGGATGCTCCACTTCCGGTCCTCTATGAAA
ATTTAGATATGCcgatgataaaaattatagtctCAGGTGGTGCGATGTTT
GCATTGTGCACGAGTCTTTTGGGTACACTATTTCCACTACCTCGTATCTT
GTACGCGATGGCTAACGATGGTCTGCTTTTCAAGTTCTTATCGAATATCA
ACGCGACGACCATGACCCCTCTAATATCCACGATCATAAGTGGACTTTTC
GCCGGTACTTTGGCTGTTGTGTTCAATCTTGAGCAACTCATCGATATGGC
GTCCATTGGTACACTCCAGGCTTACACGATTGTTTGCATTTGCGTGTTGA
TATTGCGGTACACAAACAACAATCCGCCCATCCAAGACAATAATACAACG
AAATCAAATGGTATCACGGTTTTCAMATGGTTAAATTTGTCGAACGCAAA
AGTGCCGAACTCCGACACCCAATACGTTTCAAGggcattgatatttatat
ttagtgtaTCTACGTTTGTGTTTGGAATAAGTCTCGCAAATATGGGATCA
TATCATGGAACCACGAGGAACGTACTCatgataataaattttgtatCGAT
TTTGGTGTTGTTGATAACGTTGATCATGCTGAGTAGACATCCGACAGCCG
AGGAAGATCTATCGTTCAAGgtacctttGGTTCCCATTGTACCGTGTTTG
AGCATTATACTAAATGTTTACCTGATGATGGAACTGGAGTACAAGACWTG
GATAAGTTTCACCGTGTGGCTCATCTGTGgattattgatatatttgttCT
ATGGTATCGGTCACAGTTTAGAAGGAAATAAGCAAAACATTCACCAAAAT
ACAATTCAAATCAATTTGAGTTAGGTCCTTGAACATTTCTAAAATTACCC
ATAAGTTTGAATCAACAATCAACTTAATTGGAtttctcatttatttttaa
aaatatgtgtttgtaaAATGAATGAcctttattgtataggtacttaacaR
TATTAatattactcgtataatatttttgataaacataTCCATCATAATCA
ACATCATTgtccaaaaatattgttatatcaaaaagtattttagttaaagt
aatataaatgtcACGTATATTTGAATTCTTGATCCATTTCACGAAACGaa
acttcatttttttaaatcacttcATTATGTAGAAATTCAGAAATGTAGTA
TTATGAAACTTGTGTCATCATTTGTATGTACGAGTACGTATAACGTaaga
ttaatacatattatattaattataaacatactaATAATACATAGTATGAA
TCCagtatgtatttttgttatgtaaCTATAATAGTAACTAACTATACGGG
TAATACATGGACATCACACTATTCACAATTCACACTCGGCCACTCAAATC
AGATATTCAGATATACAcagtaattacttattacttactaacatgatata
t back to topprotein sequence of XM_015513199.1 >rna8861 ID=rna8861|Name=XM_015513199.1|organism=Diuraphis noxia|type=polypeptide|length=594bp
MMDDPWYKSTDSLTWALTRKKTDLDESNKKKLNRVLTFFDLTALGTGCTL
GSGVYILAGTVAKSIAGPAVVLSFVIAAVVSAFSGLCYAELAGRVPKAGS
AYIYSYVAVGEFTAFIIGWNLIVEYLIGTAGTAKAMSNYCDSLLGNPQKR
YMTKYFPIHISFLGDYPDLTSFFVIVIIALLVAWGVRESSITNNIFTALN
LITVCTVIVTGCYKANISNWSIPKSEIPPEVKGGEGGFLPFGWVGVATGA
AKCFYGFIGFDSIAMTGEETKNPKRDIPLAIVASLFLSTIAYCGVAIVLT
LMWPYFLMDADAPLPVLYENLDMPMIKIIVSGGAMFALCTSLLGTLFPLP
RILYAMANDGLLFKFLSNINATTMTPLISTIISGLFAGTLAVVFNLEQLI
DMASIGTLQAYTIVCICVLILRYTNNNPPIQDNNTTKSNGITVFXWLNLS
NAKVPNSDTQYVSRALIFIFSVSTFVFGISLANMGSYHGTTRNVLMIINF
VSILVLLITLIMLSRHPTAEEDLSFKVPLVPIVPCLSIILNVYLMMELEY
KTWISFTVWLICGLLIYLFYGIGHSLEGNKQNIHQNTIQINLS. back to topmRNA from alignment at JOTR01000242:20833..39468+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8861 ID=rna8861|Name=XM_015513199.1|organism=Diuraphis noxia|type=mRNA|length=18636bp|location=Sequence derived from alignment at JOTR01000242:20833..39468+ (Diuraphis noxia)
AGCTATGTCCAACAACGCGGTAACGTAGTTAATCGTGCGGTAACCTTATT
ACCTAACCAACCAATCACAGCAAGGGATTCACGCGAACGTGTATAGTGGA
AACCCACCTTTATTTTCCATCGTTTGCCGGTGTGCCGCTTAAAGAGTACC
AAGGTCCAAGGTATATACTGTCCGGTCGAAGAACACGCGCAGACACTGCT
CGAATTTGTCAGCAGCACATTGCGCGTCCGTTCCCCgcaccaaatattta
ttaatatttatttataccataaCAGTTCGcaaagcataataattaataat
catatagaaACCTCGCATAATCTACATGTAACGTAATCGTATagtgtcat
taatatttttttaacgcttTGTTGCTTCTGTCGACGTTTTTTTAACGTAT
AAGTGTGCATAAATGATAcaacttacctacctatacgcGGTCGAAACGAA
TAACTGTATTGCGGTGTTGATGGACCACATTGtgtgcaatttttaaattt
tttaccataTTTATGCGTATTCCATATACAATTCCTATACGTACGCGGTA
AGCTGTTAGTCGCCTTTACCCGATTTTCCGTTTCAGGCGTTTCACAGAAT
ACGACGATTATCACACTTGTTATACTGATAATATAACACTAAATGATGGA
CGATCCTTGGTACAAATCGGTAAGTCATTCGCTCaaccaaaaataataga
tttaaatttgtggcaagtaataactataataatgaccAGAGTTTTAAGTG
TGAAAMccaagaaaattataatatacaatagtataatatatgtttaattg
aGTTACTTATttagtataacattattgtatacaCTAACAATGTATTCAAG
GACAATGCACGCATTtactaaatttgttatttaaattatactgaaATTCT
AACAAATATAACTTCAAGTTCATGGAATATTGTCTATTTGTCTGCCTATG
AAAGAATAAAGAaaattgcttaatatttttttttcaatttaatttaatta
acactaGTGCGATGAAATTAAGTTTATCAGAATTTGGAATTTGCGTATGA
TTAATCTTTTGTCaagttcaatattaaatttggttTGCACATCGCATGTT
TTAACAGTACAAAAGATAGTACTCACGACTAAATAACCAgataatacatc
aatataacATTGACACTTGTTacatcatttaatatatatcaaattcaaaa
attattacatttaattaaatcatgttatagattataataaattattttat
tacaatagcGATGTACAAACATCCTACGCCCAAATTTGATGAACCAAaga
ttcttataaattataataaataaaattatgagaaggtacatacacatttt
taataattRTAATTtaggataaaaattatttttaatattgatattatcac
TGTTTGTttcgtaagtaaaaaaaatacttatatcatattatcatgcgTAT
AATTGCCAAGTATCGTAAATAATCACACGCTATATAAAAGGAATAATTCT
TAACAAATATAGAGTTCAATAAACTTTAGGAATATTCAAATGTAGRAATT
ATAGcaataaagatataaaatgtacagtaacaatgtatataggtaataaa
ctaatgtaatcatatttaaattggtttttaccacaatttatttatactta
attttacaattactaaaatacataattacaattaacaTTACAACCAGGCT
GTTTCTTAATATGATTGTCATGTTCTCGTTATTGAATCAACCATTTTGTg
gtgttgttttttttcattatattataggcgatttaaattaaccaaaaaaa
aaatatatattttgtacagtataattaatcgtaattgttatatttttatt
cttacttTAGGAGGGAATCCGTGGCAaaataggccattgggtgtgggggt
GATATGGTGAGAGTATTTTTGTTTGAAGGTTTTTAAGTTGGTTGTGTAAC
ATGtttgtttgtgtatgtgtggcaaggatatgttgctaaaattcccaggt
ggtcacccatccgggagctagcaactgtgGCTGGAACGTACGCTCAATGC
GTTTCTGCAGATATAGCGTACGAYCGCGCCTCACACAGCcactgattatt
aattattataattgtaatagtgtaataaatacaaattctaACAGACAGTG
AAAACTCATCATCATAAAATGAagattactattaatataatatacaagac
gtCAAGACCTCACaacattatttctatttttatttgtattcatatatacT
AGCACTAATAATCTATGTCATTcatttcaaaattcataaaccacaaattg
tgaaaaaaaaatagttgtaataGCACAATATGTGCtgacatttttcataa
ttacctagttaaatttaaaaaaaaaaatgttactaggtggtaggtacaat
aataaattacaaaaaatacaagGCTAAATTTCAAACAACGATCCACACAG
AATCCCCSCTCTTAAAACCACAATctattgtagtatattatttagtaaaa
atatgtgatGATGTCGACGATTTATTATTCCGTTTCAATCGTTTTGCTTT
AAAGTCAAATGGtccaataaaacataaatattatagaatatgacATAACG
TGTTAGATTTATCAGGTCTGATACCATTTTTATGTTATGTGATTAATAGA
CAGATTCGTTGACGTGGGCGTTGACGAGGAAAAAGACAGATTTGGAtgaa
tcgaataaaaaaaaactcaataggGTATTGACCTTCTTCGACTTGACGGC
ATTGGGCACCGGCTGCACATTGGGAAGCGGTGTGTACATATTGGCCGGAA
CAGTGGCCAAATCGATCGCCGGCCCAGCCGTAGTCCTGTCTTTTGTCATT
GCCGCCGTAGTATCTGCATTTTCTGGTAAGGAAGATTTTATGgaggttaa
ttatttttaagccgATGACGCTCAATTAAAAAATCCCTATATGTTGTATA
ACTTTACCGGTAAATTCGGCCGGAATttaggtaacctaacctaaccagac
CGGCCGGGTCGAATTGAATTTATCGAATTTATCGTGAATCTCGCTTTCAG
TGTTCGGATtagataagtatttttttatctagataaagataaagataatg
CAACTCAAATGTATCTAGATAGAGATAAAAGATAACTtaacttatattta
tctatagataaaaataaagataaatacttttttatctagataaaaaaaga
tacaatttttttttaaatggttcaaAATAATCTGATCaaacaatatagtt
tttattttattattctatttactGTTGCCATACAGTCTACAGCATtatag
ctatacctatatagctatattatattatagtataatgtagcCTGACACAG
ATTAAATGtttcatgtattttttaattatatttatgtaaaaattattatt
atttattaatgaaataacaaataaaccGCTCCATAATATCAATAAACCAT
TGATTCATTTATACCAGGTGAGGGCCCGGTGACGGATGAAGGATTATCGA
TAGCTtctttaattcattttttattattttcagaactTGTAGCTAAAAAT
CGCTTCATTATGAATTAGTATATACGTTTAACactaaacaaacaatttta
acagtAGCGTTTAGTAGTTCTTCTTCTTTCATAACGacaaatgtcaaaat
ataaaaacggtaACGTGATAAACTGTTGAGTGCAAACTAAGAATAAGTGA
CAACTGACAATTGACTAAAGATGAAGATGACAATCGAGAAGCGGAGCCGA
CAGTTGCACACTCGatcaaactataaatatataatatattatgatattat
cttaGTCCGTCATTGTAACTACAATGTAATtaccaattatataaatactc
cGTGATAGTCGATAAACATTAGACAATCATAATCGATAGTCCACACTCTT
CAGACCATAATAAACCAATATCTGCATTTTCTGTGTTTGTCTAAACACGC
GTGGGACAACAATACACCtgacaaaaattaaggtacttctagttgttcga
tttaaaatatgtaaRGATGAGTTAATTGGTATacaagtttactttgcatc
ggtcGAAGCACTTTTTCGATTGTAGCAATATTTTGATRagaataaatatt
tttaattttataaatttgtcaattttttttattaaatatattgaaaatat
taaaaatatggttcgaccgatgcaaaaataaattgtatacaaataaattc
aaaaatctttacatattttaaatcgagcaACTagaattactttaattttt
atcaggcgtattgtatgttccacgtgtgttagacaaagacagaaaatcaa
cGTTTCCAATCCCCTTAACTGCAAATATCCACCCCCAGAATAGTACATTG
TGGCCTGTGGGCTACGGGTTATGGCATGCGATAACGAGGAAATAactaat
agataattaataacacaatcgttatttcattttatttgtacaaactattt
aaaaatttcattattttttaaactataaatttggtTTGAGTGATTTGCAT
CAATAAAAAATCTATCTAGATGAATTAATTtagattagtaaaaaaaatat
ctaagatGACCGTTTAGATACCTTGTAACTAACTTGTTACTaactattta
tctagataactgaataaaagacaaaaaagtatctagataaatttatctag
atatatCCGAACACTGCTCGCTTTTAGCTTATTATTGGGGGAGAATCTGT
TTTCGACCAAAACCGTGCCCTTCACTTTTTGGATGATTCATTTTtcaacc
aaatttaaaattggtcGATTCCCTTTTCSACCAAAATCATACGACCCTCC
CCTTTTCGGCCAATTCACTTTTCGACCACATTTAAAAGTTgtctaataat
ttgaaattgttgcaccactacctatattatattttcctgcaacaaaaaaa
aaaaaatgccagaTCAGTTCATAAATTCTTAAATGATgcgattaggttag
gttaggaaaactttttaataatattttatatagattctcttttattatta
tcattaatgatACCTACTACAGTAATAATTGAccttaaactttataattt
ttttttttaatgcacacAATTTCACTAGCCAAAAGTTACTTATGGGCGGC
tgctttaattattatacctttcatgttattcattaattttactattttaa
cttattgtgctaatttgtatagattgtgtaatatgttaaatgaaaatata
atatctaagaaaaaacttataaaataaccaGAGTTCACTGTTATGTgata
ccaaaaaaatttaattaacggccaatataattttaacatataaatgtTTC
TAGGACTGTGTTATGCTGAATTGGCTGGTAGAGTACCCAAAGCTGGATCA
GCATACATTTACAGTTACGTGGCAGTTGGTGAGTTCACAGCGTTCATCAT
TGGTTGGAATCTAATCGTCGAATATCTCATTGGTAATTTCAATCGTCACT
ATTTAGTTTAGCTATGATACTTAGCACTCACTACGYACAACATACACACA
TTTTACATTCACAATAATCCATTTAAATCTGTTTTTAGTTGTGTAAacta
ctaattttatattaaaaatatgttgaggTGCagaataacttaatttaaag
gtaaaaaattCCACTAGCTTAGATCCTCAAATTCAAATTCATGACCCAGT
ACAACGCTAAACTCGGTCACAAAATGGTTGtctcaaatattattacctac
ttttaattGTATAGATGATCTATAATAGATCAATTTACTWtagtttgttt
taaaaataactaagtaACATGGATTATTGAAAATGGAAAATCATCTTTGT
TGTaccttatacgtatataataagaTGGTCGTGCAAACtgtcatttattt
aaaacaaaatgtaccaATTtgcataggcgcaactagaccaATAATTTTGG
GGGTGCACAAATAGTGAAGAGCTCACTGACCCGTGAGGGCAAGCCCCCAC
ACCCCCACACCGTTCATCCCATTAGttttcatattacatttataaaaaca
aataactgctaatgtaaaatatataatataacatacatactTTGTTTTAA
TAGTGRTacgtaatacaatttataggttaacaaaattaaatgatcaGGGG
GGCTATTCAGAAATTCATACGATAAAGATCCGTATACGAAAATCGTGGTT
TCCACATGATCCTAAAAAACCGTATTCTAAACACTTTTTCGTATACGGAT
ACAATTATGTCATGTGAAAAATATTCACACGATTGATTCGGATGGGTTTC
CGTATGCGGATTCATGTTATTTAACCGGTTCTAAGGTTGAGATTATGGTT
TAAACATTGAATGACGagacttatagttataatttatgatttatgtttat
tataatatcatgatatcatctaaataatttaatatatttaagtataatat
tcattgcatcaagaattttgaattaaaagttaattagtAACATATGACGC
GCgtagaaacaaattatatagataatattttataaactcatACTATTAAT
TAAAGCGCGGATTTGTAAACATTTGCACATTTATTTTGGTTGATCGTATG
ATATGCTAAGTgagcattacaatattatttcatgacataattattcaaaa
aagacACTTTTTAGtgcttatttttgtatattttgcgattttctatttta
aaattttaattgtatatttcatcttttagtgcatatttcgatgtttttta
aatttttttttttttagaaatttttaaaatataaactacctattttgtct
attataaaataagaaaaaatattatatttttatagtttcgattaatatca
aagtaaattaataagtatacttGTAGGAATAAACGGGTTTCCCTTAGGAC
AATATTGCCTTAGGACTTAGATCAATAATCGggtaaataaaatacgtaaa
ctAAGATAAGAAAATATCGGTTATGACTCAGTCATAACTTATGAGTGTTA
CGaccataatattgaacattgactttattttactaatgttcaaaaattaa
tttttttttttttgctaatcattttatgcatattttaacattttagtgcA
TAAATTTATGCATaggtatttaagattttttagcgCATATTTGGTTGTtt
tataatgcttataaaaatccGCGCTCTatactcataaatcataatcaaac
GTTGATCTTGATTGTGTTGACCGTTTTTATCTACAAACAGTTTACTAGAA
CTACctattttaacatgattttgcttgaatgaaaattatatttattttaa
atttgttcactTWTCAAACTATTTGTTATATACCgctctatatttaatat
tgatgaattGGTAAATCTTTKTTGTGGCGTACTTTGTACCCCTGAAAGAA
TAGAGTgacacaaatcaaaatataaaatatattataattatataaataat
atataaataataaatatatatgagtattcgagtatttattcaaaatactt
ttcaaaagtattttacaCAAGACTGCATAGATGTGTTAAACTGTGTGGCT
ATgtctacagttataatattgtagacaatgtttttattagatGAATAAAA
TtggtagatataattatttttaatttaatttaaatWAAAATGTCATGATC
TCCACGAATATAtattaaccattataataaaataaatatatgtatatata
tatccgcACATTTCACCATGTCCTCAAAATACTTCCAGTCAGGCCCTGAt
ggtttattaatttgaaaaagtaaacattattttatcaaacatttgaattt
ttaaaacgatTAGGTActccaaataatttaatatttactactaGTTAATT
agtaaatgtttacttttttccatttaataataataatgttcacaTTGCTT
GTTTAATTGTGTATGTAGTTTATATAACActgaaatagatttaaaattta
aaaaagggtaGGTCAGAATTGCGGTGTAGGAAGTTTGTCCACTGTTAAAG
ggtattttttcatcatttttggtATACTTTCATATGACGTTGGCCTGTCA
CTTCCCCCTGGAGGCCTGGAacacattgtatttatttgtatattatacaa
tatgcctatatagtatatctaatataggtacataacataaAGGCACCTAT
CTATTTTTctcaatataggtatctacattatGGTACATAATTGGTACaac
atattaaagaaaaagacttatatattttttgggaGTGCACATTTTAAGCT
TGGGGGTGCACAAGTCCCCTGTGCACTCCCCATGTTGCACCAATGCCAAT
TTGTtgttatgacattttaaatgttaatttattattagaaatttaaattt
aaaatcttaaaatatgacCAGATCTACTTCAAGTATATCAACAAATTCAA
ACCAGTTTTCAGAAGTTTCATCGCTTTAATATGCATCCACCGGAATGATT
AAAAAAAGTACGTCATACACTATACAAATGAGCgagcatactattattat
ataattattcgttATATGTCATATTGTGCATGACGCCATGTGCAATATTA
TGTCTTGCAATTCATTGCGCACAGAAGTGTTCTRCTATTTCTTGTACACT
ACAATCACACACactaaccataataatttactacataCATATTGAGCATA
TATATAGCAAAATATTActgacagtataatataattatttctcttGGAGG
TTTGAATATTGCGATTTTCGGGCGTTTTAAGTTGCATTACtaacgcaata
ttattatatcggtgTTATCCGTGTTGCAGCCATGCTCGTTACTTATACTC
AATTTGTATTGGTCATTTGCAGGAACCGCGGGCACGGCTAAGGCCATGAG
TAATTACTGTGATTCTTTGCTGGGCAATCCGCAGAAAAGATACATGACCA
AATATTTTCCCATACACATCAGCTTCTTAGGCGATTATCCTGACTTAACA
TCATTCTTTGTGATTGTCATCATAGCACgtaagatttaatatatttttat
aatatacgtatcggtaagtgtttatataattacaatgatataactgtatg
tacctataatattttgatttttgacagTGTTCAATATTAcgcaaaaaatt
taatttttacatatttaaaatcttaaagttaggattattcattttattat
attatatattaattatatatatatatatatatatatatatatataaccta
tgcagattaaattaatatatttgaatcaaAAAACAGAACGATTAACggat
attaacatattaaagatcattttaaattacctagACTCTAAATTTTATTG
CTGAATGAATTAATGACACAATTTtctgtaggtaattaaaaacattaaca
taaatttgaatatttccgTCAATAACTAGCTGATTAGATTGTCTTACGCT
ATTTTCATAGTATTGGTAGCTTGGGGTGTTCGTGAATCGTCGATTACCAA
CAACATATTTACTGCATTAAATCTTATTACCGTTTGCACCGTGATTGTCA
CTGGGTGTTACAAAGGTGAGAGTCGTAATAAAAATTCTGATCCAATCATA
GAACRtttatattttataccaacaataataactatgatGAAACGTAAAAT
TTTAGCTAATATATCAAACTGGTCTATTCCAAAAAGCGAAATACCACCTG
AAGTAAAAGGCGGCGAAGGCGGATTTTTACCATTCGGATGGGTCGGTGTT
GCAACGGGAGCTGCGAAATGTTTTTACGGATTCATCGGTTTTGATTCGAT
TGCCATGACTggtgaaaatcatattttatcacaCCATAACtgataaattc
atataatttgttttttattcataccGATAGGTGAAGAAACAAAAAATCCC
AAAAGAGACATACCGCTGGCGATCGTCGCTTCTCTGTTCCTGAGTACGAT
CGCTTATTGCGGCGTGGCCATCGTTTTGACACTCATGTGGCCTTACTTTT
TGATGGtatgttattgaaatttttttttagtaataaaacaaaataatgta
aaaaattatcattcatcAATTATGAACAGTGTAGGTACACGTACGTTTCT
TAGCcacattgttttataatattaatatcgacATACCGCTTATAGGATGC
GGATGCTCCACTTCCGGTCCTCTATGAAAATTTAGATATGCcgatgataa
aaattatagtctCAGGTGGTGCGATGTTTGCATTGTGCACGAGGTACGTC
CATCTCCACGACGACGTATCACAGTGTTGTCGATTTCTcagctaatattt
ttttattattaatttgtacctAATTTGTACCTCACTATACAGTCTTTTGG
GTACACTATTTCCACTACCTCGTATCTTGTACGCGATGGCTAACGATGGT
CTGCTTTTCAAGTTCTTATCGAATATCAACGCGACGACCATGACCCCTCT
AATATCCACGATCATAAGTGGACTTTTCGCCGGTAATATACCGAGATTGT
GAACACTCACCGTTATCGATTGACCTAATTATAGTCGTAATACTGATAAA
TACCTCTACTTGCTGTTATCAGGTACTTTGGCTGTTGTGTTCAATCTTGA
GCAACTCATCGATATGGCGTCCATTGGTACACTCCAGGCTTACACGATTG
TTTGCATTTGCGTGTTGATATTGCGGTTAGTCCGAGGAGTTTTCGATAGC
CGGCAGCAGCTACACGCGGTTTTTTAATGGtgaaacattattaaatgtaa
tatgtttcattattgtttaatagGTACACAAACAACAATCCGCCCATCCA
AGACAATAATACAACGAAATCAAATGGTATCACGGTTTTCAMATGGTTAA
ATTTGTCGAACGCAAAAGTGCCGAACTCCGACACCCAATACGTTTCAAGg
gcattgatatttatatttagtatgtatatacctaatttattatatattac
tatattattatgataaaatccaataaaaataagtgCACCTTGCCACCTTC
CTTACACTAATTTTGTTTAACACCAAATCtagatcattattaattaataa
ttaatacattatcacAGCACTTTATTCCCTTCATTTTACTTTTGTTCTCA
AACCTGATATGAAAATGAACCAGAAATCAACAGTGGTAAACCACCTCTtg
catttcaatatttaattaataaaattattttttaaggcaGGAATTCGATT
GAGAACGGTCATTATTAGCGATACCCATAGCCGGAAATTGGGGGGGGGGC
TTGAGGGGTCTTAGCCCCCTCAAAACGTACAAATAGAAAAATTAGCCCCC
TTAATTTTTGGTCATTGCACTACTTACATTTAYCAAATGGCGAACGCAGT
ATTAATTTAGAAGCTTTGACTTCAGTACTTTCCGAAACTATATACCCTAA
CATGTATAAGCTTATGCAAGTTGCACTTACTCTTCCTATAAGTTCGTCTA
CGTGTGAACGTAGTTTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNttacagtaacccacttgtaacctactgtacagcagagcgacatcc
actttcccgctttttttttaataacgtgTTTCAAGATTAAtgaatacaac
attttaaagaaTGTTTACAAAGACAATAATAGTGAATTTGGTAATTGGCT
GAAAATTTTTTTCGTACTCCAATTTCTGCAGCATACAGACAGTAGAAGAT
GGTTTTATACAACTAATGGCGTTATGTCTAAATGAATTCTATGGTCATAG
ATTTgctgattatatttttaaaaacatatgttAAACCAGATTRTTTATTT
CCTCCAGTTTTATGGGCAAAAGAATCATCTCCAACATCTTAGGTAAATTT
GTACaacaaatattgaacatttcagaaaatatattatttataattttcat
ttttaggaCTAATAATGCCGATGAAATCTTTCATAGAACTTTTAACAGAC
AGTTTTATTGCATACGTCCACCTATATACGTCTTTAAAACTCAATACCAT
TAAGCAGGGTACTATTCAAAAGGCATCAAAAGCAKaagaagaaaaaaaca
atactgCAGTCATAtactatacgagtattatagtAACTactgtcaaaata
aattttctgaaggattaataaaatattaaacgcatATGGGAAACTTACAT
AGGggaattaaattgtaaattatttttaaacttttgtattataggtaggt
atatatgtatattgatatgacatttttaaaaattataatttttaattatt
ttattcaatgttttatttaatttttattttgacttgAATATAGTTCGGCA
ACGTTGCACTTAATTTCRTTCTCAATAGTACTGATTTTTTGGGTCAGCAG
TTATTTCATTGCTCTACTTCGAATGATCTTAATCGTATGCTAAAAAAGGT
CGAACGTTCTYAATCGTATTACAGCCATTTTTAAAACCTATCTAGGATTG
ATTAAGTAAATGATATAGAACCGACCTGATACATCATAAACTGTAagaaa
ttatcatattatgattcaaaatatctcaattaaaaaaaaatgctagaTAA
GCCAGATAAGGGACTTTTACACCAAAATGATAACTTTATTTCCAATTTGA
TTGCAATTTTTACAACACTAATTGAaacatttaggtatatttaaagcttt
attgttaatcatacatatattataatttttaataattaagtggGGTACTA
CAAATTCCCGAGTTGGCGCGGATACATAGCGCGGTTAAAGCACAAMACCG
GTAGGTTGCGGGATACCATTGATACCGATATAGATACCCGAAATGCACAA
CGTTgcgttaaaaaagtattttaatataggtgtaTCTACGTTTGTGTTTG
GAATAAGTCTCGCAAATATGGGATCATATCATGGAACCACGAGGAACGTA
CTCatgataataaattttgtatCGATTTTGGTGTTGTTGATAACGTTGAT
CATGCTGAGTAGACATCCGACAGCCGAGGAAGATCTATCGTTCAAGGTAT
GAGCAGTgtgattgataaaaaaaataaaaaatacaaataattgtataggg
TGTTTCATTAAGAACGCAGGATTTGATTTGGCtgtcattttttgttttgt
atgtttATTGAATTGTTTCTCTTATAACTGTTATCTTTAAACTCTCCGGT
TCTGTTTATAACCatgacacaaaataataatattatgtgaccaTGGTGCG
ACCCAGAGATGTATCAGCAAGTGATAGCAAGTTTTGTGATCCGAACAGAA
GCTTGCCAGCGAAGCCTATAGGTGGACATATTATGCCAGATGTGATATTC
TACACTTCAATCAGAgaataatgtatactatacagtttaataaaaaattg
ttgttcaaaataatttttttatatagttataacaatattaaatacggCGT
TATTTATGAAACACCCTATATTTACGTGggttttcaaattttgttataaa
aatattattttatggcattgatttttttttctagtatcgtaatatatata
cttgtgtaaattataattaattaacagttTTCTGgttgaaaaaatactaa
aaacataattaaagttgttagatttatttttattttttattaggtacctt
tGGTTCCCATTGTACCGTGTTTGAGCATTATACTAAATGTTTACCTGATG
ATGGAACTGGAGTACAAGACWTGGATAAGTTTCACCGTGTGGCTCATCTG
TGGTATGTTTTTCTTCATctaattaaacttatatattaagCCTAATATGT
TCAattatgtaaatacttttttgggTGAAAATCATAAAAGTGAGCAAAAC
ATGATGTTGTGGCTAGTTCTAgatacagataatatttttgccCAACATCA
CTTTTAGTTTATAGATTAATTTTGTGCTGTGGGCCTCACCGAAgatttac
ttataaaatgtgacagccatatttaatattatcctcATGAACTCCtagta
tgataatttatttacttttgccaaaattatttataactaaattcacttta
ttAAAACATCTGTCACCTATTAGAGTAGTGAAATGATtgaattttcaaag
tttatggtagttttagataaaaaaaagcgagtaagtggatgtcgctctgc
tgtacattaggaggtggggtggacctctgactagggtaggttaaatttga
atgcaatgataggtatcattgtatacgaaaaacgattctgaacNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
ataaccttaaaaatatatacaaacaatattatgaataaatttacaaataa
aactacaaaaaaattcaaaatcaaaatcgattttgtcgaaaactgattgt
gcgtaaaatttcccgtttttcccttaatttttagtttgcttatcccgatt
atttaaaaaaattattttgacccccaaagtaccaactagattcactttct
gatcgaataaggtactgaagtcaaaaatcgaagcactttttctgccccaa
aacgtgatgacagacacaaaaaaaaaaatattcatggttttgacgaattt
ttgtcaatctttgaacttcaaatgctaataaaaaaaaattgtacctatgt
attcttataattttttaatcactataagaataacttatgaggaactctgt
attaaattttcaagtattttgataaggCCAAAaacttttcagaaaaattg
aaaatttcagttgtctataaatatctcaaaaaagtcaaaatattttgaaa
attaaaacatgtaaaGAAAGtgccaatctaaataaattgtgactaacgat
ttttaattttttttagctacaatgaGAACAACTCATaataggaaccttgt
attacattttcatgttttttggtcgtccaacatttttttttaaaacatga
aaatatatactCATTAATAGTtaccagtaaaatatattttttctcaaacG
CAATGTTGAATAAATGTAGAGAAGATTTGTATCAGAATTCACTAgacata
gtataatttaaaaatattWAATCTATTTCTGTagtttttatatctatttt
gaATGTTTGATATCGTTAACTTTTATTYGTGCTCTATGACGGTGACAATT
TCATATATTCATTGAATTTGTAAGCCCTGAATACCAGCSATTGGACCGAA
GAATGAACTTTGATTGATTAAAACTTGTCATACAAATGAAAcccaaaaat
aatgtatataagtattttatcaattattagacGAAGATAAGATTAGTAAA
TCGACAAgttcaacaatttttacaatcCAACAAATAATATGCAATCAATT
TAGACGTTCTTCaaataaataccatttaaaattcatataagaTTATCaga
atcaaattatataattatatgcattatattcaaaataacctaatgattat
aattaacaaaatatgatttttcaaaaacttcttattgtattaaatttttt
attctaaatgtttaaagtttttaaacaaaatattaacattttacgtttta
ttaattgtttacaggattattgatatatttgttCTATGGTATCGGTCACA
GTTTAGAAGGAAATAAGCAAAACATTCACCAAAATACAATTCAAATCAAT
TTGAGTTAGGTCCTTGAACATTTCTAAAATTACCCATAAGTTTGAATCAA
CAATCAACTTAATTGGAtttctcatttatttttaaaaatatgtgtttgta
aAATGAATGAcctttattgtataggtacttaacaRTATTAatattactcg
tataatatttttgataaacataTCCATCATAATCAACATCATTgtccaaa
aatattgttatatcaaaaagtattttagttaaagtaatataaatgtcACG
TATATTTGAATTCTTGATCCATTTCACGAAACGaaacttcatttttttaa
atcacttcATTATGTAGAAATTCAGAAATGTAGTATTATGAAACTTGTGT
CATCATTTGTATGTACGAGTACGTATAACGTaagattaatacatattata
ttaattataaacatactaATAATACATAGTATGAATCCagtatgtatttt
tgttatgtaaCTATAATAGTAACTAACTATACGGGTAATACATGGACATC
ACACTATTCACAATTCACACTCGGCCACTCAAATCAGATATTCAGATATA
CAcagtaattacttattacttactaacatgatatat back to topCoding sequence (CDS) from alignment at JOTR01000242:20833..39468+ >rna8861 ID=rna8861|Name=XM_015513199.1|organism=Diuraphis noxia|type=CDS|length=1782bp|location=Sequence derived from alignment at JOTR01000242:20833..39468+ (Diuraphis noxia)
ATGATGGACGATCCTTGGTACAAATCGACAGATTCGTTGACGTGGGCGTT
GACGAGGAAAAAGACAGATTTGGAtgaatcgaataaaaaaaaactcaata
ggGTATTGACCTTCTTCGACTTGACGGCATTGGGCACCGGCTGCACATTG
GGAAGCGGTGTGTACATATTGGCCGGAACAGTGGCCAAATCGATCGCCGG
CCCAGCCGTAGTCCTGTCTTTTGTCATTGCCGCCGTAGTATCTGCATTTT
CTGGACTGTGTTATGCTGAATTGGCTGGTAGAGTACCCAAAGCTGGATCA
GCATACATTTACAGTTACGTGGCAGTTGGTGAGTTCACAGCGTTCATCAT
TGGTTGGAATCTAATCGTCGAATATCTCATTGGAACCGCGGGCACGGCTA
AGGCCATGAGTAATTACTGTGATTCTTTGCTGGGCAATCCGCAGAAAAGA
TACATGACCAAATATTTTCCCATACACATCAGCTTCTTAGGCGATTATCC
TGACTTAACATCATTCTTTGTGATTGTCATCATAGCACTATTGGTAGCTT
GGGGTGTTCGTGAATCGTCGATTACCAACAACATATTTACTGCATTAAAT
CTTATTACCGTTTGCACCGTGATTGTCACTGGGTGTTACAAAGCTAATAT
ATCAAACTGGTCTATTCCAAAAAGCGAAATACCACCTGAAGTAAAAGGCG
GCGAAGGCGGATTTTTACCATTCGGATGGGTCGGTGTTGCAACGGGAGCT
GCGAAATGTTTTTACGGATTCATCGGTTTTGATTCGATTGCCATGACTgG
TGAAGAAACAAAAAATCCCAAAAGAGACATACCGCTGGCGATCGTCGCTT
CTCTGTTCCTGAGTACGATCGCTTATTGCGGCGTGGCCATCGTTTTGACA
CTCATGTGGCCTTACTTTTTGATGGATGCGGATGCTCCACTTCCGGTCCT
CTATGAAAATTTAGATATGCcgatgataaaaattatagtctCAGGTGGTG
CGATGTTTGCATTGTGCACGAGTCTTTTGGGTACACTATTTCCACTACCT
CGTATCTTGTACGCGATGGCTAACGATGGTCTGCTTTTCAAGTTCTTATC
GAATATCAACGCGACGACCATGACCCCTCTAATATCCACGATCATAAGTG
GACTTTTCGCCGGTACTTTGGCTGTTGTGTTCAATCTTGAGCAACTCATC
GATATGGCGTCCATTGGTACACTCCAGGCTTACACGATTGTTTGCATTTG
CGTGTTGATATTGCGGTACACAAACAACAATCCGCCCATCCAAGACAATA
ATACAACGAAATCAAATGGTATCACGGTTTTCAMATGGTTAAATTTGTCG
AACGCAAAAGTGCCGAACTCCGACACCCAATACGTTTCAAGggcattgat
atttatatttagtgtaTCTACGTTTGTGTTTGGAATAAGTCTCGCAAATA
TGGGATCATATCATGGAACCACGAGGAACGTACTCatgataataaatttt
gtatCGATTTTGGTGTTGTTGATAACGTTGATCATGCTGAGTAGACATCC
GACAGCCGAGGAAGATCTATCGTTCAAGgtacctttGGTTCCCATTGTAC
CGTGTTTGAGCATTATACTAAATGTTTACCTGATGATGGAACTGGAGTAC
AAGACWTGGATAAGTTTCACCGTGTGGCTCATCTGTGgattattgatata
tttgttCTATGGTATCGGTCACAGTTTAGAAGGAAATAAGCAAAACATTC
ACCAAAATACAATTCAAATCAATTTGAGTTAG back to top
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