Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Gbkey | mRNA |
Gene | LOC107165390 |
Model evidence | Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
Product | uncharacterized ATP-dependent helicase C582.10c-like, transcript variant X1 |
Transcript id | XM_015513600.1 |
Cross References
External references for this mRNA
Database | Accession |
GeneID | 107165390 |
Genbank | XM_015513600.1 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
LOC107165390 | gene629 | Diuraphis noxia | gene | JOTR01000011 728209..731867 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
XP_015369086.1 | cds888 | Diuraphis noxia | CDS | JOTR01000011 731563..731582 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna911 ID=rna911|Name=XM_015513600.1|organism=Diuraphis noxia|type=mRNA|length=1609bp|location=Sequence derived from alignment at JOTR01000011:728209..731867- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
CAGACTAATAACAGCTTGGTACCTACCTATAAATTAAGTAAGAGTTTACT AGTTTAGACGCAGGTATTTAACATTTATTAATTCCGTTCCAAATGTTCTA AATAGTGGCATGTCGGCGTATTAATTACATTTTATAATATTTCGTTTTTG TCATTAAACTTCTTGCTAGTTACGATTCATGGTCGATACGCATTTCGTTT GGACTTAAGGAGCACAGCAGACATCAGTCAAAAATAATACCTAATATTCT GAAATTTTACTGTTTAGCAAAAATAACTGTCTAAAATGCAGCTTCCCGAT CGAAGAAAATTGTTTCAACAACGYCATCATCGTAGAGTAGAAATTGAAGC TCAGCTGCGTAGAGCACAGATTGAAGAACAGTCTAGTAGTGAAAATTCTA GTTCTGAAGATGAAGATTCATTTGAAGATGAATCAGAAGAAGAAGTAGGT GAAGATGAATCAGAAGATGAAATGGTAAATGAAGATGAATCAGAAGAAGA AGTAGTAAATGAAGGCGAATCTGAAGAAGAAGTAGCAAATGAAGATGAAT CAGAAGAAGAAATAATAATTGAAGATGGATCAGAAGAAGAAGCTGATGAA TCAGAAAAAGAAGAAGAGGAAATAATTGATGAAGAAGAGTACAATACAAG TTTCAATGAAAAAAGCCTGGAAAATAGCAGTAGGAGTCATAATAGTTCTA ATAATCTTTCTATAAATACAATAAAAGTTAAAGTTGATGATAGTAGTAAA ATATCTGTTGTCCATGATGAATCTAAAGAAACATTACAGGATAATACTGT TATTGTCAATAATAATGTATTAATGAACAAAAATAATTCTGATCATGATG ATGAAGATGATGATGATAAATCACAAATATTGTACAACTCTAATTTTAAT ATGAATGATCTACAAAATCAAGTTGTTGAATGGATGATTACCAGAGAAAG TCAAAAACCATATGGTGGAATAATTGCAACTGATATGGGTACCATCGATT GCAAAATTACAATATTAATGCATTTGTTATCAAAGTCCAATCTTCCTAAT TCGGATAACACACAATCAGAAGGAGAAACTGATTTGGATGAAACCATTTC CTCAAAAGGATGTACATTGATTTTATGCCCAAGATCAAGTATAGATCATT GGTTTGATCTTTTGAAAAAACAGGGTTCATTAAACGTGTGGCTTCATTAT GGAAGATGTCGAGATATATCACTACATGATTTAACTCAAAAAGATGTCGT TATCACAACAGTTACACTGGTTCTAACAAGTTTCCGCAACAAACTAAATG ATCCATTATATCAAATAAAATGGCATCGAATAATATTGGATGATATCAAG CTTTATAATTATAAACAGCAAACTTCCAAGGCATTATGTCAATTATCAGG TATTTGTCATTGGGTTTTTTCTGGACCAACAATTATTGACAACGAYGATG ATGAAGCTATCTATAGCTTAATTAAATTTATACATTATAAGCCATTAAAC ATATTTGAAAATTGGAAAAACTGGATAAAAGCAAATAAAACTGTATCAAT ATATGAAAAGTTGGGGCATTTATATTATAAAATGAAGATTGTTTGAATAG AAGATGATA back to topprotein sequence of XM_015513600.1 >rna911 ID=rna911|Name=XM_015513600.1|organism=Diuraphis noxia|type=polypeptide|length=437bp
MQLPDRRKLFQQRHHRRVEIEAQLRRAQIEEQSSSENSSSEDEDSFEDES EEEVGEDESEDEMVNEDESEEEVVNEGESEEEVANEDESEEEIIIEDGSE EEADESEKEEEEIIDEEEYNTSFNEKSLENSSRSHNSSNNLSINTIKVKV DDSSKISVVHDESKETLQDNTVIVNNNVLMNKNNSDHDDEDDDDKSQILY NSNFNMNDLQNQVVEWMITRESQKPYGGIIATDMGTIDCKITILMHLLSK SNLPNSDNTQSEGETDLDETISSKGCTLILCPRSSIDHWFDLLKKQGSLN VWLHYGRCRDISLHDLTQKDVVITTVTLVLTSFRNKLNDPLYQIKWHRII LDDIKLYNYKQQTSKALCQLSGICHWVFSGPTIIDNDDDEAIYSLIKFIH YKPLNIFENWKNWIKANKTVSIYEKLGHLYYKMKIV. back to topmRNA from alignment at JOTR01000011:728209..731867- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna911 ID=rna911|Name=XM_015513600.1|organism=Diuraphis noxia|type=mRNA|length=3659bp|location=Sequence derived from alignment at JOTR01000011:728209..731867- (Diuraphis noxia) CAGACTAATAACAGCTTGGTACCTACCTATAAATTAAGTAAGAGTTTACT
AGTTTAGACGCAGGTATTTAACATTTATTAATTCCGTTCCAAATGTTCTA
AATAGTGGCATGTCGGCGTATTAATTACATTTTATAATATTTCGTTTTTG
TCATTAAACTTCTTGCTAGTTACGATTCATGGTCGATACGCATTTCGTTT
GGACTTAAGGAGCACAGCAGACATCAGTCAAAAATAATACCTAATATTCT
GAAATTTTACTGTTTAGCAAAAATAACTGTCTAAAATGCAGCTTCCCGAT
CGAAGGTATGTAATAGTTATAAGTCTAGGGTTTGAGCCACTGGTTTTTAA
ATTTATTTTTTTGTTTAAAAACTAACTAAAATTTAATTAATCCGGTATAA
CTGTTGATATTTTATCTGTTCAATTTAATGAAATACAAAATACTTGCATT
TTTACTATGCATAGCCTATAACACACGTCATGTATACCTACTGTATAGGT
GGTGTATGCACTTTTTTTCTTCATCATATTAACTATAAGCCATGTGTTGA
TAATTGATGAAGAGAAATATTTCCGATACATTAATAAATTCAAGTTCATT
AGTCATTATGCACTAGCAACGCCATTATACACCCCTACAAATTTATTTTA
TTTTTTTCAATCTACCTAGGTACATACATTTAATATAAATTTCTGAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAATATTTAATTACCTATATTAATTTACATTCT
CGTTTCCCATTCCTATAATGTTATATATGGAGTAGCACCTATATTGGTTC
AGTTAACTTGAATAAAGGTATAAGCAAAATGTATTCTAGATATTTTATTA
TAATATTCTGTATTTCTCTCATTAATAAATCAGTTGAACTACAAATTTTT
ACTACATTTTTGCCTTTTATATTTAATAAATGAGATTGAGTTTTTACTTT
TTTGATTATGTTTTAGAAAAATTGGAAATTATTTATGTACATAATACTTA
CTGTATAAACCTAATTTAAATTTTATATTAATTGTTCATAATCATTCTAA
ATCAAAATAATTTAATAAATGTTTGTTACTGTTGTGTTTAGAAAATTGTT
TCAACAACGYCATCATCGTAGAGTAGAAATTGAAGCTCAGCTGCGTAGAG
CACAGATTGAAGAACAGTCTAGTAGTGAAAATTCTAGTTCTGAAGATGAA
GATTCATTTGAAGATGAATCAGAAGAAGAAGTAGGTGAAGATGAATCAGA
AGATGAAATGGTAAATGAAGATGAATCAGAAGAAGAAGTAGTAAATGAAG
GCGAATCTGAAGAAGAAGTAGCAAATGAAGATGAATCAGAAGAAGAAATA
ATAATTGAAGATGGATCAGAAGAAGAAGCTGATGAATCAGAAAAAGAAGA
AGAGGAAATAATTGATGAAGAAGAGTACAATACAAGTTTCAATGAAAAAA
GCCTGGAAAATAGCAGTAGGAGTCATAATAGTTCTAATAATCTTTCTATA
AATACAATAAAAGTTAAAGTTGATGATAGGTAAGAAATATTGAAYGTTAA
TTTAGGTGTTCATGATAAATTTATTTTTTATTTTTTAGTAGTAAAATATC
TGTTGTCCATGATGAATCTAAAGAAACATTACAGGATAATACTGTTATTG
TCAATAATAATGTATTAATGAACAAAAATAATTCTGATCATGATGATGAA
GATGATGATGATAAATCACAAATATTGTACAACTCTAATTTTAATATGAA
TGATCTACAAAATCAAGTTGTTGAATGGATGATTACCAGAGAAAGTCAAA
AACCATATGGTGGAATAATTGGCAAGTTTAAATTGAAAATATTAAAATAT
ATGTAGTWACTTAATTTACTTTATATTGAYATAGCAACTGATATGGGTAC
CATCGATTGCAAAATTACAATATTAATGCATTTGTTATCAAAGTCCAATC
TTCCTAATTCGGATAACACACAATCAGAAGGAGAAACTGATTTGGATGAA
ACCATTTCCTCAAAAGGATGTACATTGATTTTATGCCCAAGATCAAGTAT
AGATCATTGGTTTGATCTTTTGAAAAAACAGGGTTCATTAAACGTGTGGC
TTCATTATGGAAGATGTCGAGATATATCACTACATGAGTAATTGATTTTA
ACATTATTATTATTAAGTACATACTTAACAATTGCAATACATATTTTCTT
TTAAAATTCTAGTTTAACTCAAAAAGATGTCGTTATCACAACAGTTACAC
TGGTTCTAACAAGTTTCCGCAACAAACTAAATGTAAGAATATGCTATTAA
TAACTCATTTTTAAGACAATAGGTAGTTAGTTAAATTATAATTTTGTATT
TGATATTTACTTCATGTAAGTTGTTTAGTGTTAAAAAACAATATTATGAA
TCATAACTTGTTTATGACATAATTATCATGCTATTAACTCAATTTCTTTC
AAAAAATGTCTAAAAAAATATCCTGATACAGTCTGCATGAATTAAAAAAA
AAAAAAATGTTTATCACATTTTAAATTTTATTTTTAGGATCCATTATATC
AAATAAAATGGCATCGAATAATATTGGATGATATCAAGCTTTATAATTAT
AAACAGCAAACTTCCAAGGCATTATGTCAATTATCAGGTATTTGTCATTG
GGTTTTTTCTGGACCAACAATTATTGACAACGAYGATGATGAAGCTATCT
ATAGCTTAATTAAATTTATACATTATAAGCCATTAAACATATTTGAAGTG
AGATAAAAATTATTATCCACTACAGTAATAAAGGAACTATATTTTAAATT
TGATTTCAGAATTGGAAAAACTGGATAAAAGCAAATAAAACTGTATCAAT
ATATGAAAAGTTGGGGCATTTATATTATAAAATGAAGATTGTTTGAATAG
AAGATGATA back to topCoding sequence (CDS) from alignment at JOTR01000011:728209..731867- >rna911 ID=rna911|Name=XM_015513600.1|organism=Diuraphis noxia|type=CDS|length=1311bp|location=Sequence derived from alignment at JOTR01000011:728209..731867- (Diuraphis noxia) ATGCAGCTTCCCGATCGAAGAAAATTGTTTCAACAACGYCATCATCGTAG AGTAGAAATTGAAGCTCAGCTGCGTAGAGCACAGATTGAAGAACAGTCTA GTAGTGAAAATTCTAGTTCTGAAGATGAAGATTCATTTGAAGATGAATCA GAAGAAGAAGTAGGTGAAGATGAATCAGAAGATGAAATGGTAAATGAAGA TGAATCAGAAGAAGAAGTAGTAAATGAAGGCGAATCTGAAGAAGAAGTAG CAAATGAAGATGAATCAGAAGAAGAAATAATAATTGAAGATGGATCAGAA GAAGAAGCTGATGAATCAGAAAAAGAAGAAGAGGAAATAATTGATGAAGA AGAGTACAATACAAGTTTCAATGAAAAAAGCCTGGAAAATAGCAGTAGGA GTCATAATAGTTCTAATAATCTTTCTATAAATACAATAAAAGTTAAAGTT GATGATAGTAGTAAAATATCTGTTGTCCATGATGAATCTAAAGAAACATT ACAGGATAATACTGTTATTGTCAATAATAATGTATTAATGAACAAAAATA ATTCTGATCATGATGATGAAGATGATGATGATAAATCACAAATATTGTAC AACTCTAATTTTAATATGAATGATCTACAAAATCAAGTTGTTGAATGGAT GATTACCAGAGAAAGTCAAAAACCATATGGTGGAATAATTGCAACTGATA TGGGTACCATCGATTGCAAAATTACAATATTAATGCATTTGTTATCAAAG TCCAATCTTCCTAATTCGGATAACACACAATCAGAAGGAGAAACTGATTT GGATGAAACCATTTCCTCAAAAGGATGTACATTGATTTTATGCCCAAGAT CAAGTATAGATCATTGGTTTGATCTTTTGAAAAAACAGGGTTCATTAAAC GTGTGGCTTCATTATGGAAGATGTCGAGATATATCACTACATGATTTAAC TCAAAAAGATGTCGTTATCACAACAGTTACACTGGTTCTAACAAGTTTCC GCAACAAACTAAATGATCCATTATATCAAATAAAATGGCATCGAATAATA TTGGATGATATCAAGCTTTATAATTATAAACAGCAAACTTCCAAGGCATT ATGTCAATTATCAGGTATTTGTCATTGGGTTTTTTCTGGACCAACAATTA TTGACAACGAYGATGATGAAGCTATCTATAGCTTAATTAAATTTATACAT TATAAGCCATTAAACATATTTGAAAATTGGAAAAACTGGATAAAAGCAAA TAAAACTGTATCAATATATGAAAAGTTGGGGCATTTATATTATAAAATGA AGATTGTTTGA back to top
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