Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107165921 |
| Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
| Product | luc7-like protein 3, transcript variant X2 |
| Transcript id | XM_015514358.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107165921 |
| Genbank | XM_015514358.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107165921 | gene6752 | Diuraphis noxia | gene | JOTR01000302 245730..250613 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015369844.1 | cds9646 | Diuraphis noxia | CDS | JOTR01000302 250172..250276 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna9970 ID=rna9970|Name=XM_015514358.1|organism=Diuraphis noxia|type=mRNA|length=1418bp|location=Sequence derived from alignment at JOTR01000302:245730..250613- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
CTAAAACCCTAGTTTATATCATTATTCGACATTTTCAACCATTCAACCAG
CAACATTTTGTAGATAACAATTTTTTGCCATTGCGAATTGCTACTAACAG
TACTAACTGTGGACACCGTAACCCGTTTACCCGTTGGCAATTATAGTTTC
TTACTTTTCTAAATTCTTGAATTATTATTTTTTCTTGAAATCAGAAATCA
AACGTTTTATTTTTATTTGTACAATTTAAGCACGTTAATACATTTTCTTT
CGAACTCCTACATTCAATCGATTTGATTATTGCACTGCAATATAATAATT
AATAACGATTGTTTTTTATTGATTAAACTGTTACATAATGGCAGTATCGG
CAGCTGCTGCGTTACTTGATGAACTCATGGGGAGAAATCGAAATGATGGT
CCGAACGCTCAAAAGAAACCCGTACATTGGGAAGATCCTGAGTTTTGTAA
ATACTTTATGGTTAAATTTTGTCCTCACGATCTTTTTGTTAATACTCGTG
CTGATCTTGGAGCTTGCCCAAAAGTTCATTGCGAAGAAGCTAAAACTCAA
TATAATGAAGCTAGTAGCCGTTCCAAAATGCAGTATGAAGATGAATTTGT
GGCATTTGCTACTAGTTTATTAAATGATGTTGAGCGCCGCATCGAAAAAG
GAAAACAAAGGTTGGAGCTTATGAATAAAACTGAAACGCCGGTGTCCCAT
TCTAATAGCCAAAGTCAGAAAAATCAAGAGCAAATTAAATTATTGTCAGA
AAAAATTAATGGGTTAGTACAAGAAGCTGAACAAATGGGTATTCGTGGAC
ATGTTGAAGAAGCTCAGGGACTGATGAAGCTTTGTGATCAATTAAAAGAA
GAACGGGATACCCTAAGAAAGCAAAATGAGAGTATCCATTGGTCACAAAC
TTATGAACTAGCTGCTGCTCAAGAAAAACAAATGGAGGTATGTGAAGTAT
GCGGAGCTTTTTTAATTGTTGGCGATGCGCAGTCCCGTATTGATGATCAT
TTGATGGGAAAACAACATATGGGTTATGCTCGATTAAAAAATGCTGTGAA
TGAAATACAAGAGCAAAGAAAAAAATATGTAGAAGAAAGAGAAAAACAAC
GCGAAGAAGAAAGGAAAAAACGCATGGACCGTACTAGGAGTAAATCTAAA
GACGTAGATAGACATAGTCGTGATACTAATAATGACAAGAGATCTAAAAG
CTCTCGAGACCGATCCCATCATCGAATTGATAGAAAATCTGAACGACACG
AAAGAGATAGACGGAGAAGTAGAAGTCGCAGTGATCGTCATTCTTCTAAT
AGTCATAGGCATAGAGGGCATAATGGCAACAGTCGTAGAGATCACTAGAA
TTTTATTCAAGACACATTTCAATTCAGGTTCAAATATCTGATGCAGTATA
TAATGTTAAAATGTATAA back to topprotein sequence of XM_015514358.1 >rna9970 ID=rna9970|Name=XM_015514358.1|organism=Diuraphis noxia|type=polypeptide|length=337bp
MAVSAAAALLDELMGRNRNDGPNAQKKPVHWEDPEFCKYFMVKFCPHDLF
VNTRADLGACPKVHCEEAKTQYNEASSRSKMQYEDEFVAFATSLLNDVER
RIEKGKQRLELMNKTETPVSHSNSQSQKNQEQIKLLSEKINGLVQEAEQM
GIRGHVEEAQGLMKLCDQLKEERDTLRKQNESIHWSQTYELAAAQEKQME
VCEVCGAFLIVGDAQSRIDDHLMGKQHMGYARLKNAVNEIQEQRKKYVEE
REKQREEERKKRMDRTRSKSKDVDRHSRDTNNDKRSKSSRDRSHHRIDRK
SERHERDRRRSRSRSDRHSSNSHRHRGHNGNSRRDH. back to topmRNA from alignment at JOTR01000302:245730..250613- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9970 ID=rna9970|Name=XM_015514358.1|organism=Diuraphis noxia|type=mRNA|length=4884bp|location=Sequence derived from alignment at JOTR01000302:245730..250613- (Diuraphis noxia)
CTAAAACCCTAGTTTATATCATTATTCGACATTTTCAACCATTCAACCAG
CAACATTTTGTAGATAACAATTTTTTGCCATTGCGAATTGCTACTAACAG
TACTAACTGTGGACACCGTAACCCGTTTACCCGTTGGCAATTATAGTTTC
TTACTTTTCTAAATTCTTGAATTATTATTTTTTCTTGAAATCAGAAATCA
AACGTTTTATTTTTATTTGTACAATTTAAGCACGTTAATACATTTTCTTT
CGAACTCCTACATTCAATCGATTTGATTATTGCACTGCAATATAATAATT
AATAACGATTGTTTTTTATTGATTAAACTGTTACATAATGGCAGTATCGG
CAGCTGCTGCGTTACTTGATGAACTCATGGGGAGAAATCGAAATGATGGT
CCGAACGCTCAAAAGAAACCCGTACATTGGGAAGATCCTGAGGTAAATTA
TTTTGGTTAACTACGATTTGTTGCTATGTCAACAAAAACCTTTTTTTTTA
TTGAACATTTATTCAAATTATGCATTTATTTAATAAAATTATAATAATTA
AGTGATTTTCTTATGATAAAATAATATTGTAAGTTGTAATAATTTTTTAT
AAATTTTGAGCCTAGTAATAGGTTATCTTCAGTTATTTTGACAAACTTGA
CATTTCTTCCTAAAGCATTTTAAATTTCAGATACTCTGCTCCTAATAATT
ATTTATCTATTTAACTATTAAAAATAGGAATAGGACAAACTTCAGTTTTT
ACAAATTTAAATCAAAACTATCTTATTTGAAGTTTTGAATATTTAAAAAT
TTAACCATACCAAATTATAAAACATTTCATGCTTATTATGTATGCTTGAA
CTATTGAAATTGTTTAAATTTTCAAATTCACATTTAATCGTCTTCAAAGT
TTGAACTGTTTGAATTTTTCTAAGGTTTGAGAGTTTGAGACCTTTTTCTA
AATTAAAATGCTGGATTAGAGTTAATTATCTGATTTTCATGTGTTACTCA
AGGTAAATTATTAATTAGTGAGTGTGGGGTGATTCATAGAACTTATGAAT
CTCGAGTGAGGTTTTGCTTAAATTGTACTAAATACTTTTATTTTGGATAA
ATTATATTTAAATTTATTGTTTTTGATATCTGAATTATATTTTAGAATTT
AATTTTTTTAGATTAATACAAAAAATCGCCATTTTAGATTTTTGTTACCT
ATTAGTTTAGAAATAAATTGTTTTCAGCCATATTTTTTAATAAGTAATTA
AATTATCCTTTTAGTTAACACATAGGTAACAATTTATATTTATTTTATGC
TTTATATATATATATTTTGTTTTCAGTTTTGTAAATACTTTATGGTTAAA
TTTTGTCCTCACGATCTTTTTGTTAATACTCGTGCTGATCTTGGAGCTTG
CCCAAAAGTTCATTGCGAAGAAGCTAAAACTCAATATAATGAAGCTAGTA
GCCGTTCCAAAATGCAGTATGAAGATGAATTTGTGGCATTTGCTACTAGT
TTATTAAATGATGTTGAGCGCCGCATCGAAAAAGGAAAACAAAGGTTGGA
GCTTATGAATAAAACTGAAACGGTTAGTATTCCAAATTTATTTTATGATT
AATTAGGTAACATGCATTTTTTTTTATGTAAGTTCTTAAACAATATTAAA
AATAACCTATTTACAGTCATTGTTTATAATAATAAACAGTAAAAAAATGA
AATATATAATTTCATTGGCCTATAAAGTTGTTAGCGTATTCTATAGGTAA
TTAAAAAAAGGCAGATTGTGATCGGATGCTGTATTGTTGATCATGGATGC
GGCGCTTACAGCCTTGAATCTTAAACACGTCAAAGGTTTTTGAGGTACAT
CATTAAATAATTCCCCCCCTTTATATTTTAATTATTAAAGTAATAACTAA
GTTTAGATTTTAGCTTCAATTGTGTAAATATGTGGGTGATAAGTCTTCAA
TTTGTATTGTAATATGGTAGTGTGTTTTTAATATATATTATTGTTATACT
TAAATAATTGTAATTATTATTTCTTCTGTGTTAGGTCATTCTTAGTTTCA
AAACTTTTCTTTTTTACTGGATACCCTTATTTTATATGTATGTATGTATG
TATGTATATATATATGTTGTTAAGCAATAAACATACTGAAAACTATGGGT
AGATCAGAATTTGGTGGTCGGATATAGGTTTAAAAGTATAGCTCACTGAA
AATGTAGGTTTTCATTTATACCTGGCTCTCAGTTAAATAAAATCAAAAAC
CACTTAGTTTGGCTCTTGAACTTCAAATAACTTTTAACTTCTAAACCAAG
TCTAACCTCCAAATTCTAATTTTTTCATGTTTTCAGCATGCTTAGCTTCA
TACATTATAGCATAAAGAATAAAGGGTGTCCAGTAAACAAAAATATACCT
TACATTCTTTTAAATTCTTCAAACTAAACAATTATAAAAATTATTTTATT
GATTCTTAACATTTGAATGCATAATTTAATATAAACAAATGATCATGCCA
ATGACTAATGAGGAATGACAAATATTTTTATTAATAATATGTTATACATT
TTTTTATAACAATTTACATAATATTTCAAAATCAATTTCTCAATTATCTT
AAATATCCTATGAGAATTTAAGAAAATTATCGGCACTAGCTAATAATTAA
ATCAAAATATCTTAGTTATTATAAGAAGTGATTTTAGTTTGGTTACTGTA
GGATTTTTATTATTGATCTAATATTGGTTATAATTTATTTATTATTACAT
GATTATAAATTTAGACTTATTATTATTAATAAATTTTATACAATAATAGC
TTTGGGAAATATAATTTAATTAACATTAGTTAATAATAATATAATTAATT
AACTTTTTGATTTAATGTTTTGTAGCCGGTGTCCCATTCTAATAGCCAAA
GTCAGAAAAATCAAGAGCAAATTAAATTATTGTCAGAAAAAATTAATGGG
TTAGTACAAGAAGCTGAACAAATGGGTATTCGTGGACATGTTGAAGAAGC
TCAGGGACTGATGAAGCTTTGTGATCAATTAAAAGAAGAACGGGATACCC
TAAGAAAGCAAAATGAGAGTATCCATTGGTCACAAGTAATTATTTTTGAA
AGAATTAAATTATATGCTCAATATTTTATACTATGTAATTACATTTTCAT
TTAAGACTTATGAACTAGCTGCTGCTCAAGAAAAACAAATGGAGGTATGT
GAAGTATGCGGAGCTTTTTTAATTGTTGGCGATGCGCAGTCCCGTATTGA
TGATCATTTGATGGGAAAACAACATATGGGTTATGCTCGATTAAAAAATG
CTGTGAATGAAATACAAGAGCAAAGAAAAAAATATGTAGAAGAAAGAGAA
AAACAACGCGAAGAAGAAAGGAAAAAACGCATGGACCGTACTAGGTATTT
TATTTTTCCTCTTAAAATGCAGAACCTTAACTATATTTGAATTTTAATTT
AATATAGGAGTAAATCTAAAGACGTAGATAGACATAGTCGTGATACTAAT
AATGACAAGAGATCTAAAAGCTCTCGAGACCGATCCCATCATCGAATTGA
TAGGTAATATAAGATCTGTTCAAAAGAAGAAAAAAAATTGTTTACTTCAT
TTAATCAAACTTTTATATAAATAAAAAATAATTTCATAGAAAATCTGAAC
GACACGAAAGAGATAGACGGAGAAGTAGAAGTCGCAGTGATCGTCATTCT
TCTAATAGTCATAGGCATAGAGGTAATATTTTTTTAGATAGTTATTAGCT
AAGATAAATGTATACCTTTAAATTTTTTAAATACAGGGCATAATGGCAAC
AGTCGTAGAGATCACTAGAATTTTATTCAAGACACATTTCAATTCAGGTA
AATAYTTTTTATTTTATCGCGTTAAAGCATATTTGGAATTGATTTTTAAA
AACGCGATGATATTGATGAGGTGTGTTATTTAAAACAAGAACGGGGTAAA
GCTTATAAATATGTTAATTTTAAAATAAAAACAAAAGAAAAAATATCCAT
AAAAAATATTTGTTTGATAACAAATCCTGTTACAACTATGGTGTAAATTA
TCACATAGCAGAAGAAAATGGTCATATTGGGCGCTTTATTTCAAAAAAGT
GCTTACTCATCATTCGAAAGTCTGCAGATCTTCAAAATTAACATGTGACT
TTTTGTCAGGTATTTATATGAAACGAGGTATTTATAAAAAATAAAATATC
TGAAGTAAATAAATACAGTGAATTGTGTTAATATATATAACAAAACCTAT
TTATGGGAAGTTTTATTCAATATTATGTTGCATTTTTTTACGGCAGATCT
CAATATAAAGTTGTATACTTTAAATTAAATAATTAATTAGTTATTTTATC
TATAAATCAAGTGTTATTCTATGTATTGGCAAAAATTTGCCCATGGTACC
TACTTATGAATATTTATATAAACAATTTATAAATTTAAGAAATAATATTG
CTATTTATCAAAATAATCGTAGGTATTTATTTTTTATCTATTACCTTTTT
ATTACTATATTTTTCTGCATAAAATTATTAATGAAATTATTATTAAATGA
AAAAGTATTAGTTATATTGACCTTAAATATTAAGATCTTTATAATATAAA
CAAATATATATAACACAAGCATGATATACCGTTTTTTATTTGTATTGGGT
TATATTTATGTATATTCTATTGATGGTATGTTTTTTACAATTAATAAAAA
TATGTATTCATTTGTTTGCAAATARATAATTTTTTATGAAAATAGTAAAA
TTATATGCTCTAAACATGATAATTATTAATTTATAAGGAAAATTGCTTTA
CATATTTTTACATACAAAATATTAACAATTTTTTTTTTTCTAGGTTCAAA
TATCTGATGCAGTATATAATGTTAAAATGTATAA back to topCoding sequence (CDS) from alignment at JOTR01000302:245730..250613- >rna9970 ID=rna9970|Name=XM_015514358.1|organism=Diuraphis noxia|type=CDS|length=1011bp|location=Sequence derived from alignment at JOTR01000302:245730..250613- (Diuraphis noxia)
ATGGCAGTATCGGCAGCTGCTGCGTTACTTGATGAACTCATGGGGAGAAA
TCGAAATGATGGTCCGAACGCTCAAAAGAAACCCGTACATTGGGAAGATC
CTGAGTTTTGTAAATACTTTATGGTTAAATTTTGTCCTCACGATCTTTTT
GTTAATACTCGTGCTGATCTTGGAGCTTGCCCAAAAGTTCATTGCGAAGA
AGCTAAAACTCAATATAATGAAGCTAGTAGCCGTTCCAAAATGCAGTATG
AAGATGAATTTGTGGCATTTGCTACTAGTTTATTAAATGATGTTGAGCGC
CGCATCGAAAAAGGAAAACAAAGGTTGGAGCTTATGAATAAAACTGAAAC
GCCGGTGTCCCATTCTAATAGCCAAAGTCAGAAAAATCAAGAGCAAATTA
AATTATTGTCAGAAAAAATTAATGGGTTAGTACAAGAAGCTGAACAAATG
GGTATTCGTGGACATGTTGAAGAAGCTCAGGGACTGATGAAGCTTTGTGA
TCAATTAAAAGAAGAACGGGATACCCTAAGAAAGCAAAATGAGAGTATCC
ATTGGTCACAAACTTATGAACTAGCTGCTGCTCAAGAAAAACAAATGGAG
GTATGTGAAGTATGCGGAGCTTTTTTAATTGTTGGCGATGCGCAGTCCCG
TATTGATGATCATTTGATGGGAAAACAACATATGGGTTATGCTCGATTAA
AAAATGCTGTGAATGAAATACAAGAGCAAAGAAAAAAATATGTAGAAGAA
AGAGAAAAACAACGCGAAGAAGAAAGGAAAAAACGCATGGACCGTACTAG
GAGTAAATCTAAAGACGTAGATAGACATAGTCGTGATACTAATAATGACA
AGAGATCTAAAAGCTCTCGAGACCGATCCCATCATCGAATTGATAGAAAA
TCTGAACGACACGAAAGAGATAGACGGAGAAGTAGAAGTCGCAGTGATCG
TCATTCTTCTAATAGTCATAGGCATAGAGGGCATAATGGCAACAGTCGTA
GAGATCACTAG back to top
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