rna6731 (polypeptide) Diuraphis noxia
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|985397714|ref|XP_015366418.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Diuraphis noxia] >gi|1229890223|ref|XP_022165501.1| mediator of RNA polymerase II transcription subunit 18 [Myzus persicae] >gi|1229890225|ref|XP_022165502.1| mediator of RNA polymerase II transcription subunit 18 [Myzus persicae]) HSP 1 Score: 461.07 bits (1185), Expect = 3.587e-164 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 Query: 1 MEAIKEAPIPAMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL 224 MEAIKEAPIPAMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL Sbjct: 1 MEAIKEAPIPAMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL 224
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|641656687|ref|XP_008180060.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Acyrthosiphon pisum]) HSP 1 Score: 459.914 bits (1182), Expect = 1.075e-163 Identity = 223/224 (99.55%), Postives = 224/224 (100.00%), Query Frame = 0 Query: 1 MEAIKEAPIPAMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL 224 MEAIKEAPIPAMDSLT+AMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL Sbjct: 1 MEAIKEAPIPAMDSLTSAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPPL 224
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|1228012932|ref|XP_021938428.1| (mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012934|ref|XP_021938429.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012936|ref|XP_021938430.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012938|ref|XP_021938431.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012940|ref|XP_021938433.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012942|ref|XP_021938434.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012944|ref|XP_021938435.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|1228012946|ref|XP_021938436.1| mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis] >gi|646697355|gb|KDR09100.1| Mediator of RNA polymerase II transcription subunit 18 [Zootermopsis nevadensis]) HSP 1 Score: 365.925 bits (938), Expect = 1.348e-126 Identity = 174/216 (80.56%), Postives = 195/216 (90.28%), Query Frame = 0 Query: 9 IPAMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAP-ESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPP 223 I AMDSLTAA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIR QPL LRVRRA+DY DMP+QLRYIGQPE+GDKSRPTI+R+SID+ T+ T+V+FLTE+G RMDFEYI+RGYMFRKGRMKITVSKIFK+ VG+ P ES++P+SQSYLVELSVLAPS QDAIAEDMR FAEQL+PLV LEK+DYKRL P Sbjct: 6 ITAMDSLTAALKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRGANLQPLLLRVRRALDYQDMPWQLRYIGQPEIGDKSRPTIVRSSIDIGTSSTVVEFLTELGCRMDFEYIVRGYMFRKGRMKITVSKIFKVGQVGQGKPAESMEPMSQSYLVELSVLAPSGQDAIAEDMRSFAEQLRPLVQLEKIDYKRLQHIP 221
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|1339044149|ref|XP_023710155.1| (mediator of RNA polymerase II transcription subunit 18 [Cryptotermes secundus] >gi|1339044151|ref|XP_023710156.1| mediator of RNA polymerase II transcription subunit 18 [Cryptotermes secundus] >gi|1330908656|gb|PNF31056.1| Mediator of RNA polymerase II transcription subunit 18 [Cryptotermes secundus]) HSP 1 Score: 362.844 bits (930), Expect = 2.066e-125 Identity = 175/215 (81.40%), Postives = 195/215 (90.70%), Query Frame = 0 Query: 11 AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVV--GKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQPP 223 AMDSLTAA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIR QPL LRVRRA+DY DMP+QLRYIGQPE+GDK+RPTI+R+SID+ T+ T+V+FLTE+G RMDFEYI+RGYMFRKGRMKITVSKIFK+ V GKPA ES++P+SQSYLVELSVLAPS QDAIAEDMR FAEQL+PLV LEKVDYKRL P Sbjct: 8 AMDSLTAALKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRGTNLQPLLLRVRRALDYQDMPWQLRYIGQPEIGDKNRPTIVRSSIDIGTSSTVVEFLTELGCRMDFEYIVRGYMFRKGRMKITVSKIFKVGQVAQGKPA-ESMEPMSQSYLVELSVLAPSGQDAIAEDMRSFAEQLRPLVQLEKVDYKRLQHMP 221
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|383852250|ref|XP_003701641.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Megachile rotundata] >gi|805772325|ref|XP_012136892.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Megachile rotundata]) HSP 1 Score: 360.533 bits (924), Expect = 1.638e-124 Identity = 174/216 (80.56%), Postives = 197/216 (91.20%), Query Frame = 0 Query: 7 APIP-AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQ 221 API AMDSL+AA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVD+GPETF+DHEMCFSIR+ + QPL LRVRRA+DY DMP+QLRYIGQPELGDKSRPTI+R+S+D+AT+ T+VDFLTE+G R+DFEYI RGYMFRKGRMK+TVSKIFKM GK PES++ ISQSYLVELSVLAPS QDAIAEDMR+FAEQLKPLV LEK+DYKRL Sbjct: 3 APISTAMDSLSAALKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDTGPETFNDHEMCFSIRA-SEQPLLLRVRRALDYQDMPWQLRYIGQPELGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMGQQGK-MPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRLVH 216
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|817052585|ref|XP_012257187.1| (mediator of RNA polymerase II transcription subunit 18 [Athalia rosae]) HSP 1 Score: 360.147 bits (923), Expect = 2.496e-124 Identity = 174/213 (81.69%), Postives = 196/213 (92.02%), Query Frame = 0 Query: 11 AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTP--QPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQ 221 AMDSL+AA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPE+FHDHEMCFSIR +P QPL LRVRRA+DY +MP+QLRYIGQPELGDKSRPTI+R+SID+AT+ T+V+FLTE+G R+DFEYI+RGYMFRKGRMK+TVSKIFKM GK PESV+PISQSYLVELSVLAPS QDAIAEDMR+FAEQLKPLV LEK+DYKRL Sbjct: 8 AMDSLSAALKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPESFHDHEMCFSIRRGSPPEQPLLLRVRRALDYQEMPWQLRYIGQPELGDKSRPTIVRSSIDIATSSTVVEFLTELGCRLDFEYIVRGYMFRKGRMKVTVSKIFKMG-QGK-LPESVEPISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRLAH 218
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|1101349585|ref|XP_018900705.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Bemisia tabaci]) HSP 1 Score: 359.377 bits (921), Expect = 5.993e-124 Identity = 175/215 (81.40%), Postives = 194/215 (90.23%), Query Frame = 0 Query: 11 AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRL--TQPP 223 AMDSLTAA+K+NI+PNQEYLLQGSVLD+AVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIR +PQPL LRVRRA+DY DMP+QLRYIGQ ELGDKSRPTI+R+SIDV T+V+FLTE+G RMDFEYILRGYMFRKGRMKITVSKIFKM GKP PESV+P+SQSYLVELSVLAP+ QDAI EDM+ FAEQL+PLV L+K+DYKRL T PP Sbjct: 10 AMDSLTAALKSNIIPNQEYLLQGSVLDAAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRGTSPQPLLLRVRRALDYQDMPWQLRYIGQSELGDKSRPTIVRSSIDVGCNATVVEFLTELGCRMDFEYILRGYMFRKGRMKITVSKIFKMG-QGKP-PESVEPMSQSYLVELSVLAPNGQDAIGEDMKNFAEQLRPLVQLDKIDYKRLPVTGPP 222
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|1000752800|ref|XP_015599291.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 isoform X2 [Cephus cinctus]) HSP 1 Score: 358.607 bits (919), Expect = 9.719e-124 Identity = 177/218 (81.19%), Postives = 198/218 (90.83%), Query Frame = 0 Query: 7 APIP-AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTP--QPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQ 221 API AMDSL+AA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIR P QPL LRVRRA+DY DMP+QLRYIGQPELGDKSRPTI+R+SID+AT+ ++V+FLTE+G R+DFEYI+RGYMFRKGRMK+TVSKIFKM GK PESV+PISQSYLVELSVLAPS QDAIAEDMR+FAEQL+PLV LEK+DYKRL Sbjct: 3 APISTAMDSLSAALKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRRGPPPEQPLLLRVRRALDYQDMPWQLRYIGQPELGDKSRPTIVRSSIDIATSNSVVEFLTELGCRLDFEYIVRGYMFRKGRMKVTVSKIFKMG-QGK-LPESVEPISQSYLVELSVLAPSGQDAIAEDMRIFAEQLRPLVQLEKIDYKRLVH 218
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|987913545|ref|XP_015432619.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Dufourea novaeangliae] >gi|1016163501|gb|KZC10663.1| Mediator of RNA polymerase II transcription subunit 18 [Dufourea novaeangliae]) HSP 1 Score: 358.221 bits (918), Expect = 1.140e-123 Identity = 173/216 (80.09%), Postives = 196/216 (90.74%), Query Frame = 0 Query: 7 APIP-AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQ 221 API AMDSL+AA+K+NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVD+GPETF+DHE+CFSIR + QPL LRVRRA+DY DMP+QLRYIGQPELGDKSRPTI+R+S+D+AT+ T+VDFLTE+G R+DFEYI RGYMFRKGRMK+TVSKIFKM GK PES++ ISQSYLVELSVLAPS QDAIAEDMR+FAEQLKPLV LEK+DYKRL Sbjct: 3 APISTAMDSLSAAIKSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDTGPETFNDHEICFSIRG-SEQPLLLRVRRALDYQDMPWQLRYIGQPELGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMAQQGK-MPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRLVH 216
BLAST of XM_015510932.1 vs. GenBank_protein
Match: gi|1059203559|ref|XP_017766250.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 18 [Eufriesea mexicana] >gi|1026576405|gb|OAD62809.1| Mediator of RNA polymerase II transcription subunit 18 [Eufriesea mexicana]) HSP 1 Score: 357.836 bits (917), Expect = 1.619e-123 Identity = 171/211 (81.04%), Postives = 193/211 (91.47%), Query Frame = 0 Query: 11 AMDSLTAAMKNNIVPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDSGPETFHDHEMCFSIRSVTPQPLTLRVRRAIDYLDMPYQLRYIGQPELGDKSRPTILRNSIDVATTPTIVDFLTEMGFRMDFEYILRGYMFRKGRMKITVSKIFKMMVVGKPAPESVDPISQSYLVELSVLAPSNQDAIAEDMRVFAEQLKPLVHLEKVDYKRLTQ 221 AMDSLTAA+++NI+PNQEYLLQGSVLDSAVEVLLHRLRGLCDNVD+GPETF+DHEMCFSIR + QPL LRVRRA+DY DMP+QLRYIGQPELGDKSRPTI+R+S+D+AT+ T+VDFLTE+G R+DFEYI RGYMFRKGRMK+TVSKIFKM GK PES++ ISQSYLVELSVLAPS QDAIAEDMR+FAEQLKPLV LEK+DYKRL Sbjct: 8 AMDSLTAAIRSNIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDTGPETFNDHEMCFSIRG-SEQPLLLRVRRALDYQDMPWQLRYIGQPELGDKSRPTIVRSSLDIATSNTVVDFLTELGCRLDFEYIARGYMFRKGRMKVTVSKIFKMGQQGK-IPESMEAISQSYLVELSVLAPSGQDAIAEDMRIFAEQLKPLVQLEKIDYKRLVH 216 The following BLAST results are available for this feature:
BLAST of XM_015510932.1 vs. GenBank_protein
Analysis Date: 2018-05-22 (Blastp: NCBI Gnomon 20160302 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on NCBI Gnomon 20160302
Date Performed: 2018-05-22 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >rna6731 ID=rna6731|Name=XM_015510932.1|organism=Diuraphis noxia|type=polypeptide|length=225bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Metabolic Data
View metabolic data for rna6731 on AphidCyc
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