Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
jg10538 | jg10538 | Eriosoma lanigerum | gene | scaffold_6 29556831..29557505 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
jg10538.t1.CDS1 | jg10538.t1.CDS1 | Eriosoma lanigerum | CDS | scaffold_6 29556831..29556896 - |
jg10538.t1.CDS2 | jg10538.t1.CDS2 | Eriosoma lanigerum | CDS | scaffold_6 29556960..29557505 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
jg10538.t1.exon1 | jg10538.t1.exon1 | Eriosoma lanigerum | exon | scaffold_6 29556831..29556896 - |
jg10538.t1.exon2 | jg10538.t1.exon2 | Eriosoma lanigerum | exon | scaffold_6 29556960..29557505 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >jg10538.t1 ID=jg10538.t1|Name=jg10538.t1|organism=Eriosoma lanigerum|type=mRNA|length=612bp|location=Sequence derived from alignment at scaffold_6:29556831..29557505- (Eriosoma lanigerum)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTCCTTTGAACGATATTCAATTTTTAAGAAAGTTATATGAGTATTC TGAAATTAACAAAACTATAGCTGAAGCCACAATTGGAAAATTTGTGAATC ATTTGTACTATTTAAATGAAGAATGTTTAACTTTTGCATTGTTCGATAAA CGAGTAGACAGTGCAACAAAATTATTAATGATTAACAATATACTAAAAGA CGAAGGAGAAGAAGATGAAAATGAAGAAATGAGTAACGAAATTCCCAAAA AATTAGTATTAAAAAAATCTGACGTTCCGTTGTTTTTAAACGATGATAAT AATACAATTTTAGTAAAATTTATTGGAAAAAAGTCACGAAAATTATTCAA AAGATTCAAAATAAATAGCGATTTTTTAGAAACTCATCCGGACACTTGGA ATATTTCGAATGACTATAAAAAAGGTGAAGAAATAATACAGAAATTAAAA GTTGTAAACGATCCTGCAGAAAGAGGAATTAAACTTATTGAAGAATTTGA TAAAAAAAATAACAAAAACGAAGAACAAAAACAATTTCTATTGCAGACCA TTCAAGATTATCGGCAGAAATATCCTAAACCAACATTAGATATTATGAAG AAGTCGTTTTAA back to topprotein sequence of jg10538.t1 >jg10538.p1 ID=jg10538.p1|Name=jg10538.t1|organism=Eriosoma lanigerum|type=polypeptide|length=204bp
MAPLNDIQFLRKLYEYSEINKTIAEATIGKFVNHLYYLNEECLTFALFDK RVDSATKLLMINNILKDEGEEDENEEMSNEIPKKLVLKKSDVPLFLNDDN NTILVKFIGKKSRKLFKRFKINSDFLETHPDTWNISNDYKKGEEIIQKLK VVNDPAERGIKLIEEFDKKNNKNEEQKQFLLQTIQDYRQKYPKPTLDIMK KSF* back to topmRNA from alignment at scaffold_6:29556831..29557505- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >jg10538.t1 ID=jg10538.t1|Name=jg10538.t1|organism=Eriosoma lanigerum|type=mRNA|length=675bp|location=Sequence derived from alignment at scaffold_6:29556831..29557505- (Eriosoma lanigerum) ATGGCTCCTTTGAACGATATTCAATTTTTAAGAAAGTTATATGAGTATTC
TGAAATTAACAAAACTATAGCTGAAGCCACAATTGGAAAATTTGTGAATC
ATTTGTACTATTTAAATGAAGAATGTTTAACTTTTGCATTGTTCGATAAA
CGAGTAGACAGTGCAACAAAATTATTAATGATTAACAATATACTAAAAGA
CGAAGGAGAAGAAGATGAAAATGAAGAAATGAGTAACGAAATTCCCAAAA
AATTAGTATTAAAAAAATCTGACGTTCCGTTGTTTTTAAACGATGATAAT
AATACAATTTTAGTAAAATTTATTGGAAAAAAGTCACGAAAATTATTCAA
AAGATTCAAAATAAATAGCGATTTTTTAGAAACTCATCCGGACACTTGGA
ATATTTCGAATGACTATAAAAAAGGTGAAGAAATAATACAGAAATTAAAA
GTTGTAAACGATCCTGCAGAAAGAGGAATTAAACTTATTGAAGAATTTGA
TAAAAAAAATAACAAAAACGAAGAACAAAAACAATTTCTATTGCAGGTAA
ATCAGTTAAAATATTTATGTACAAACTTATATGTAATAATATTTATTTTT
ATTTTCCAGACCATTCAAGATTATCGGCAGAAATATCCTAAACCAACATT
AGATATTATGAAGAAGTCGTTTTAA back to topCoding sequence (CDS) from alignment at scaffold_6:29556831..29557505- >jg10538.t1 ID=jg10538.t1|Name=jg10538.t1|organism=Eriosoma lanigerum|type=CDS|length=612bp|location=Sequence derived from alignment at scaffold_6:29556831..29557505- (Eriosoma lanigerum) ATGGCTCCTTTGAACGATATTCAATTTTTAAGAAAGTTATATGAGTATTC TGAAATTAACAAAACTATAGCTGAAGCCACAATTGGAAAATTTGTGAATC ATTTGTACTATTTAAATGAAGAATGTTTAACTTTTGCATTGTTCGATAAA CGAGTAGACAGTGCAACAAAATTATTAATGATTAACAATATACTAAAAGA CGAAGGAGAAGAAGATGAAAATGAAGAAATGAGTAACGAAATTCCCAAAA AATTAGTATTAAAAAAATCTGACGTTCCGTTGTTTTTAAACGATGATAAT AATACAATTTTAGTAAAATTTATTGGAAAAAAGTCACGAAAATTATTCAA AAGATTCAAAATAAATAGCGATTTTTTAGAAACTCATCCGGACACTTGGA ATATTTCGAATGACTATAAAAAAGGTGAAGAAATAATACAGAAATTAAAA GTTGTAAACGATCCTGCAGAAAGAGGAATTAAACTTATTGAAGAATTTGA TAAAAAAAATAACAAAAACGAAGAACAAAAACAATTTCTATTGCAGACCA TTCAAGATTATCGGCAGAAATATCCTAAACCAACATTAGATATTATGAAG AAGTCGTTTTAA back to top
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