Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
jg1080 | jg1080 | Eriosoma lanigerum | gene | scaffold_4507 1..1235 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
jg1080.t1.CDS1 | jg1080.t1.CDS1 | Eriosoma lanigerum | CDS | scaffold_4507 1..200 - |
jg1080.t1.CDS2 | jg1080.t1.CDS2 | Eriosoma lanigerum | CDS | scaffold_4507 1148..1235 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
jg1080.t1.exon1 | jg1080.t1.exon1 | Eriosoma lanigerum | exon | scaffold_4507 1..200 - |
jg1080.t1.exon2 | jg1080.t1.exon2 | Eriosoma lanigerum | exon | scaffold_4507 1148..1235 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >jg1080.t1 ID=jg1080.t1|Name=jg1080.t1|organism=Eriosoma lanigerum|type=mRNA|length=288bp|location=Sequence derived from alignment at scaffold_4507:1..1235- (Eriosoma lanigerum)|Notes=Excludes all bases but those of type(s): exon.
ATGTACGTACACTCCAAATTACTGCAAAAGTGGCGGAAAAGTACGTATCT GTCTGCTAAAGTCCAAATAAATCGGTTTATATCAAGTAAACTTGAAGGTC CAGAGACTGAAACTGCAGAAAATAAATTACCAGAATATAATGATTTAATA TCTGATAATGTTTTAATAAAAAGTGAACAAAATTTTGAAAACAATATTGA CAATTTACCATCAACTTTAGATTATAAAGACCCTAGTTCATGGCCAAATT TACGTTTAGATTCACATAGGTCATGCACAATAAAATCA back to topprotein sequence of jg1080.t1 >jg1080.p1 ID=jg1080.p1|Name=jg1080.t1|organism=Eriosoma lanigerum|type=polypeptide|length=96bp
MYVHSKLLQKWRKSTYLSAKVQINRFISSKLEGPETETAENKLPEYNDLI SDNVLIKSEQNFENNIDNLPSTLDYKDPSSWPNLRLDSHRSCTIKS back to topmRNA from alignment at scaffold_4507:1..1235- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >jg1080.t1 ID=jg1080.t1|Name=jg1080.t1|organism=Eriosoma lanigerum|type=mRNA|length=1235bp|location=Sequence derived from alignment at scaffold_4507:1..1235- (Eriosoma lanigerum) ATGTACGTACACTCCAAATTACTGCAAAAGTGGCGGAAAAGTACGTATCT
GTCTGCTAAAGTCCAAATAAATCGGTTTATATCAAGTAGTATGTACTACC
CTCGATTTATTTGGGTACGTCGTAAAAAGTATCTGTATCTTAATACGTCG
TATAACCAATAATCGCCAAAAGATGCAAAACCGACAAAAAAAATGTACGT
ACACTTGAAAATATTGCAAAAAGTGGCGGAAAAGTACGTATCTGTCTATT
GAACTCCAAATAAATCGGTTTATATTAGGTAGTACGTACTACTTCGATTA
ATTTGGTTATGTCAAAAAAAGTATCTGTACGTCGTATTAGTTTTTCATGT
ACAAACTATAGCAAACGTTTTTTTTATTAATAATGGTTATTTGTCAAAAT
TTTGCATCAGTCTGCTGAATTTTAAATATATCGGTTTATATTTAAAAACA
ATTCTAGGCACAATGGTACAAAATGTAACCAATACACTCCAAAAGATGCA
AAACCGACAAAAACGTACGCACAGTACATATAAGTTTTTACTATAATATA
TGAATAGATGATTGTGTATACAATAATATTCATACTATTTTAATTCACGT
TAGTTTTAAACAAATTGTTAATTTTTATTAAAATTTATTAAATGAAATCC
ATTTAAAATTAATTCATCGATTATGATAAGAATAATACAATAAAAATAAA
TATATAAACATTAAATACATAATTAATATCCACATTTCCGTCAAATAATA
TTCCCCGATACTTAAAAATTAATAATTTCATTTTCTATAATCCATACCTC
GTACATAATTATGTATATATTTATAACTTAACTCAATAAAAATTTACAAT
TTATAATATTGTAAATAAATGTGCCAATATTATACTTCTAGTTTAAAATT
TAATTTTTAACAACCCTTTGCTGGTTTCAATGAATGAATGAACCAATACT
TATTATAAAATACTATAAAATAAACATCTTCTATACTTAATAAATACAAT
TTAATAAAACAGTTCATAATTTATCGTTTCAACAGAACTTGAAGGTCCAG
AGACTGAAACTGCAGAAAATAAATTACCAGAATATAATGATTTAATATCT
GATAATGTTTTAATAAAAAGTGAACAAAATTTTGAAAACAATATTGACAA
TTTACCATCAACTTTAGATTATAAAGACCCTAGTTCATGGCCAAATTTAC
GTTTAGATTCACATAGGTCATGCACAATAAAATCA back to topCoding sequence (CDS) from alignment at scaffold_4507:1..1235- >jg1080.t1 ID=jg1080.t1|Name=jg1080.t1|organism=Eriosoma lanigerum|type=CDS|length=288bp|location=Sequence derived from alignment at scaffold_4507:1..1235- (Eriosoma lanigerum) ATGTACGTACACTCCAAATTACTGCAAAAGTGGCGGAAAAGTACGTATCT GTCTGCTAAAGTCCAAATAAATCGGTTTATATCAAGTAAACTTGAAGGTC CAGAGACTGAAACTGCAGAAAATAAATTACCAGAATATAATGATTTAATA TCTGATAATGTTTTAATAAAAAGTGAACAAAATTTTGAAAACAATATTGA CAATTTACCATCAACTTTAGATTATAAAGACCCTAGTTCATGGCCAAATT TACGTTTAGATTCACATAGGTCATGCACAATAAAATCA back to top
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