jg9383.p1 (polypeptide) Eriosoma lanigerum

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejg9383.t1
Unique Namejg9383.p1
Typepolypeptide
OrganismEriosoma lanigerum (Woolly apple aphid)
Sequence length143
Homology
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BLAST of jg9383.t1 vs. genbank:protein
Match: VEN38930.1 (unnamed protein product [Callosobruchus maculatus])

HSP 1 Score: 249.2 bits (635), Expect = 1.400e-62
Identity = 121/142 (85.21%), Postives = 134/142 (94.37%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYM+F++ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVDV DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  LN L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLTLNSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: KAE9556667.1 (hypothetical protein FO519_000073 [Halicephalobus sp. NKZ332])

HSP 1 Score: 249.2 bits (635), Expect = 1.400e-62
Identity = 120/142 (84.51%), Postives = 133/142 (93.66%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVD+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  L  L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDIMDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLMMLTSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: VDN04625.1 (unnamed protein product [Thelazia callipaeda])

HSP 1 Score: 248.8 bits (634), Expect = 1.800e-62
Identity = 121/142 (85.21%), Postives = 134/142 (94.37%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYM+F+N EKQKL+EEVHA VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVD+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFLGGE+RETSQTKVL+QL  L+ L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMNFDNDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDILDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLGGEIRETSQTKVLKQLLMLSSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: KRX19349.1 (AP-2 complex subunit sigma [Trichinella nelsoni])

HSP 1 Score: 248.1 bits (632), Expect = 3.100e-62
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKI+YRRYAGLYFC+C D+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVY V+DEMFL GE+RETSQTKVL+QL  LN L+
Sbjct:  361 MIRFILIQNRAGKTRLAKWYMHFDDNEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICCDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYAVVDEMFLAGEIRETSQTKVLKQLMMLNSLE 502
[Close]
BLAST of jg9383.t1 vs. genbank:protein
Match: XP_003379784.1 (AP-2 complex subunit sigma [Trichinella spiralis])

HSP 1 Score: 248.1 bits (632), Expect = 3.100e-62
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKI+YRRYAGLYFC+C D+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVY V+DEMFL GE+RETSQTKVL+QL  LN L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDNEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICCDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYAVVDEMFLAGEIRETSQTKVLKQLMMLNSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: KFD54790.1 (hypothetical protein M513_04224 [Trichuris suis] >KFD71666.1 hypothetical protein M514_04224 [Trichuris suis] >CDW57813.1 AP 2 complex subunit sigma [Trichuris trichiura])

HSP 1 Score: 247.7 bits (631), Expect = 4.100e-62
Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWY+HFE+ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKI+YRRYAGLYFC+C DV DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVY V+DEMFL GE+RETSQTKVL+QL  LN L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYIHFEDSEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICCDVNDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYAVVDEMFLAGEIRETSQTKVLKQLIMLNSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: NP_508767.1 (AP complex subunit sigma [Caenorhabditis elegans] >XP_002644541.1 C. briggsae CBR-APS-2 protein [Caenorhabditis briggsae] >XP_003117944.1 CRE-APS-2 protein [Caenorhabditis remanei] >EGT30501.1 CBN-APS-2 protein [Caenorhabditis brenneri] >OZG25635.1 hypothetical protein FL83_00669, partial [Caenorhabditis latens] >PIC18091.1 hypothetical protein B9Z55_024109 [Caenorhabditis nigoni] >EFO82542.1 CRE-APS-2 protein [Caenorhabditis remanei] >KAF1747796.1 hypothetical protein GCK72_024262 [Caenorhabditis remanei])

HSP 1 Score: 247.7 bits (631), Expect = 4.100e-62
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVD+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  L  L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLTSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: TKR70363.1 (hypothetical protein L596_022400 [Steinernema carpocapsae])

HSP 1 Score: 247.3 bits (630), Expect = 5.300e-62
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVD+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  L  L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDIMDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLTSLE 142
[Close]
BLAST of jg9383.t1 vs. genbank:protein
Match: RUS84276.1 (hypothetical protein EGW08_007969 [Elysia chlorotica])

HSP 1 Score: 246.9 bits (629), Expect = 7.000e-62
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA+VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVDV DNNL YLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  L  L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHAVVTVRDTKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLVYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLGSLE 142
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BLAST of jg9383.t1 vs. genbank:protein
Match: PAV91784.1 (hypothetical protein WR25_24327 [Diploscapter pachys])

HSP 1 Score: 246.9 bits (629), Expect = 7.000e-62
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0 
Query:    1 MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFVEFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTELDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK 143
            MIRFILIQNRAG+TRLAKWYMHF++ EKQKL+EEVHA VTVRD KHTNFVEFRNFKIVYRRYAGLYFC+CVD+ DNNLYYLEAIHNFVEVLNEYF++V ELDLVFNFYKVYTV+DEMFL GE+RETSQTKVL+QL  L  L+
Sbjct:    1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDILDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLTSLE 142
The following BLAST results are available for this feature:
BLAST of jg9383.t1 vs. genbank:protein
Analysis Date: 2020-07-06 (Diamond: on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
VEN38930.11.400e-6285.21unnamed protein product [Callosobruchus maculatus][more]
KAE9556667.11.400e-6284.51hypothetical protein FO519_000073 [Halicephalobus ... [more]
VDN04625.11.800e-6285.21unnamed protein product [Thelazia callipaeda][more]
KRX19349.13.100e-6283.10AP-2 complex subunit sigma [Trichinella nelsoni][more]
XP_003379784.13.100e-6283.10AP-2 complex subunit sigma [Trichinella spiralis][more]
KFD54790.14.100e-6283.80hypothetical protein M513_04224 [Trichuris suis] >... [more]
NP_508767.14.100e-6284.51AP complex subunit sigma [Caenorhabditis elegans] ... [more]
TKR70363.15.300e-6284.51hypothetical protein L596_022400 [Steinernema carp... [more]
RUS84276.17.000e-6284.51hypothetical protein EGW08_007969 [Elysia chloroti... [more]
PAV91784.17.000e-6284.51hypothetical protein WR25_24327 [Diploscapter pach... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010171 body morphogenesis
biological_process GO:0072583 clathrin-dependent endocytosis
biological_process GO:0009792 embryo development ending in birth or egg hatching
biological_process GO:0006886 intracellular protein transport
biological_process GO:0002119 nematode larval development
cellular_component GO:0030122 AP-2 adaptor complex
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0035615 clathrin adaptor activity
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2020-07-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..142
e-value: 2.0E-61
score: 204.0
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 1..139
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..139
e-value: 1.3E-59
score: 200.2
NoneNo IPR availableGENE3D3.30.450.60coord: 1..142
e-value: 1.0E-54
score: 186.4
NoneNo IPR availableCDDcd14833AP2_sigmacoord: 1..141
e-value: 6.05835E-86
score: 245.56
IPR027156AP-2 complex subunit sigmaPANTHERPTHR11753:SF6AP-2 COMPLEX SUBUNIT SIGMAcoord: 1..139
IPR000804Clathrin adaptor complex, small chainPROSITEPS00989CLAT_ADAPTOR_Scoord: 57..67
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6contigscaffold_6:20810111..20810539 -    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Eriosoma lanigerum OGS1.02020-07-06 .483843
Blast2GO on OGS1.02020-07-06 .996502
InterProScan on OGS1.02020-07-06 .65312
Diamond: on OGS1.0 vs NR2020-07-06 .40307
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jg9383.t1jg9383.t1Eriosoma lanigerummRNAscaffold_6 20810111..20810539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>jg9383.p1 ID=jg9383.p1|Name=jg9383.t1|organism=Eriosoma lanigerum|type=polypeptide|length=143bp
MIRFILIQNRAGRTRLAKWYMHFENYEKQKLVEEVHAIVTVRDPKHTNFV
EFRNFKIVYRRYAGLYFCVCVDVEDNNLYYLEAIHNFVEVLNEYFNSVTE
LDLVFNFYKVYTVLDEMFLGGEVRETSQTKVLEQLRQLNPLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
TermDefinition
GO:0030122AP-2 adaptor complex
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Molecular Function
TermDefinition
GO:0035615clathrin adaptor activity
Vocabulary: Biological Process
TermDefinition
GO:0002119nematode larval development
GO:0006886intracellular protein transport
GO:0009792embryo development ending in birth or egg hatching
GO:0010171body morphogenesis
GO:0072583clathrin-dependent endocytosis
Vocabulary: INTERPRO
TermDefinition
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su
IPR027156APS2
IPR000804Clathrin_sm-chain_CS
IPR011012Longin-like_dom_sf