SFRICE002695-RA (mRNA) Spodoptera frugiperda rice

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameSFRICE002695-RA
Unique NameSFRICE002695-RA
TypemRNA
OrganismSpodoptera frugiperda rice (Fall armyworm - rice variant)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
SFRU_RICE_004261contigSFRU_RICE_004261:11472..21840 -    View in Apollo
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Spodoptera frugiperda rice annotation OGS2.32015-12-04
Properties
Property NameValue
Full nameSFRICE002695
eAED0.10
QI170|1|1|1|0.92|0.86|15|2373|704
AED0.10
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
SFRICE002695SFRICE002695Spodoptera frugiperda ricegeneSFRU_RICE_004261 11472..21840 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE002695-RASFRICE002695-PASpodoptera frugiperda ricepolypeptideSFRU_RICE_004261 13890..21670 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE002695-RA-exonSFRICE002695-RA-exon-15Spodoptera frugiperda riceexonSFRU_RICE_004261 11472..11798 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-14Spodoptera frugiperda riceexonSFRU_RICE_004261 11844..14003 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-13Spodoptera frugiperda riceexonSFRU_RICE_004261 14504..14651 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-12Spodoptera frugiperda riceexonSFRU_RICE_004261 15392..15570 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-11Spodoptera frugiperda riceexonSFRU_RICE_004261 16002..16176 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-10Spodoptera frugiperda riceexonSFRU_RICE_004261 16697..16800 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-9Spodoptera frugiperda riceexonSFRU_RICE_004261 17251..17370 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-8Spodoptera frugiperda riceexonSFRU_RICE_004261 17726..17903 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-7Spodoptera frugiperda riceexonSFRU_RICE_004261 18212..18396 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-6Spodoptera frugiperda riceexonSFRU_RICE_004261 18871..19011 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-5Spodoptera frugiperda riceexonSFRU_RICE_004261 19302..19377 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-4Spodoptera frugiperda riceexonSFRU_RICE_004261 19790..19935 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-3Spodoptera frugiperda riceexonSFRU_RICE_004261 20670..20825 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-2Spodoptera frugiperda riceexonSFRU_RICE_004261 21193..21538 -
SFRICE002695-RA-exonSFRICE002695-RA-exon-1Spodoptera frugiperda riceexonSFRU_RICE_004261 21624..21840 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE002695-RA-three_prime_UTRSFRICE002695-RA-three_prime_UTR-32Spodoptera frugiperda ricethree_prime_UTRSFRU_RICE_004261 11472..11798 -
SFRICE002695-RA-three_prime_UTRSFRICE002695-RA-three_prime_UTR-31Spodoptera frugiperda ricethree_prime_UTRSFRU_RICE_004261 11844..13889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-14Spodoptera frugiperda riceCDSSFRU_RICE_004261 13890..14003 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-13Spodoptera frugiperda riceCDSSFRU_RICE_004261 14504..14651 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-12Spodoptera frugiperda riceCDSSFRU_RICE_004261 15392..15570 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-11Spodoptera frugiperda riceCDSSFRU_RICE_004261 16002..16176 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-10Spodoptera frugiperda riceCDSSFRU_RICE_004261 16697..16800 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-9Spodoptera frugiperda riceCDSSFRU_RICE_004261 17251..17370 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-8Spodoptera frugiperda riceCDSSFRU_RICE_004261 17726..17903 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-7Spodoptera frugiperda riceCDSSFRU_RICE_004261 18212..18396 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-6Spodoptera frugiperda riceCDSSFRU_RICE_004261 18871..19011 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-5Spodoptera frugiperda riceCDSSFRU_RICE_004261 19302..19377 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-4Spodoptera frugiperda riceCDSSFRU_RICE_004261 19790..19935 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-3Spodoptera frugiperda riceCDSSFRU_RICE_004261 20670..20825 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-2Spodoptera frugiperda riceCDSSFRU_RICE_004261 21193..21538 -
SFRICE002695-RA-CDSSFRICE002695-RA-CDS-1Spodoptera frugiperda riceCDSSFRU_RICE_004261 21624..21670 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE002695-RA-five_prime_UTRSFRICE002695-RA-five_prime_UTR-16Spodoptera frugiperda ricefive_prime_UTRSFRU_RICE_004261 21671..21840 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>SFRICE002695-RA ID=SFRICE002695-RA|Name=SFRICE002695-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=4658bp|location=Sequence derived from alignment at SFRU_RICE_004261:11472..21840- (Spodoptera frugiperda rice)|Notes=Excludes all bases but those of type(s): exon.  
TATTTCTGAACTGAAACGATTACGTCATTGTCACGACAATGACATTGATA
AAAGATTGAGGTTATCAAATCAATTTTCAGGAAATAATCTACATAATCTT
GATAATTAAGAATAAAATTATGTGTAATTAAGTGTTTGCCTCGTAGAATA
TTAAGTGTAATTTTATAAAAATGTGGCAATTGCTGCAAACGAGCTCTTGT
CAGCTTGTTAGACAAAGACTGCTAACGGCTAAAAGCAACGTATATTTTAC
GAATCTTATGAAGAATAGACCGTCAAATGTCGTAAAACGATATTTTTCGG
AGGTCAAAACTTCGTCGGAGAAAAATGCAAAGCCAGGGTTGTTGCTGCTC
TGTAGTCCATGGAAGTTGTGTACCGGGGTCAGTTTAGCGTTGGGAGCTCG
CTATTTCCTTAGCAACGGTCCGGCTTACTGCAAGGCCCACACAGTTCCTT
CTAGGGTTATTCAAAGGAGGCCAAATGTTGAGGAAGACAATGCTAAGTTT
GACTGGGATAAATTCCTCTCTTATTTACAACCTCATAAATGGCTTTTAAT
GGCTGCTGTAGGGTCAGCATTAGTGGTGGCATTCTTCAACGTGTACATAC
CAGCCGTGTTAGGAGAAGTTGTGAATGTATTGGCAAACCAAAGGTCGAAT
CCTACTGCAGACTTCATGGACAACATCAGAACACCCGCGCTCAAACTGGT
TGCCCTGTACATTGGTCAGGCAATATTCACATTCATGTACATCCACCTGC
TATCACAAGTGGGGGAGAGAGTGGCTGCACAGATGAAGCAGGAGCTCTTT
GAGTCCATACTCAGGCAGGACATCGCATTCTTTGACCAAGAGAGGACCGG
CGAGCTTGTCAATAGGTTAACAGTAGATGTCCAAGATTTCAAGAGTTCCT
TCAAACAAACTATTTCTGGTGGACTCAGAGCTACTACACAGGTGGTCGGT
TCTTCAGTCAGTCTGCTTGTGATATCACCGCAGCTAACAGGACTCACACT
ACTGTGCGTGCCTTCAGTAGTCATTGGAGGCACATTCATTGGGTCCTTGC
TTAGGAAGCTCTCGCGAGAGGCGCAGTCGCAAATAGAAAAATCGACTCTA
GTAGCGGAGGAGGCGATAGCGAATATGCGCACTGTGCGTGCGTTTGCAGG
CGAGGAGAACGAAGCGCAACTGTTTGCGCAGGAGTGCAAAGCGGCTGCTG
AACTTAGCATGGAGTTAGGATTGGGTATCGGACTGTTCCAAGCTGGAACT
AATTTGTTCCTCAATGGCATGGTCCTAGGTACAATGTTCATGGGTGGGCA
CTTGATGGCGTCTGGCCAGATGTCTGCCGGTGACGTCATGGCGTTCCTTG
TCAACGCACAGACCGTACAACGATCTGTTGCGCAACTGTCCTTGTTATTC
GGGTCTGTCGTGAAAGGACTCAGCGCTGGAGGACGCGTGTTCGAGTACAT
CAACAAGAAGCCGGTGATGGACAGTTCTGGTTCGAAGGTGATCCGGTACC
ACGAGTTCCACGGAGACATTGAGTTCAAGGACGTCAGCTTCTCATACCCT
AGCAGACCTGAAGCGACAGTATTGAAGAACTTCAACCTGAAGATACCGGC
GGGTAAGACCGTGGCTATCGTCGGCACGTCTGGCAACGGCAAGTCTACGA
TAGCTTGTCTGTTGGAGAGGTTCTACGACGTAGACGCAGGCCAGGTTACA
ATAGACGGTGTAGACGTGCGGGAGATGGACTGCAAGTGGCTGAGGGGCCG
AGCCCTGGGCATCATCAGCCAGGAGCCCGTACTCTTCGCCACCACCGTCA
AGGAGAACATCCGATATGGACGACCTGAGGCCAGTGATGAGGATGTATAC
AGAGCCGCCCAAACAGCGAACGCTCACGACTTCATAGTGGGCTTTCCCAA
CGGGTACGATACGCTAGTGGGGGAGCGAGGTATGTCCCTCAGCGGGGGAC
AGAAACAGAGGATAGCCATCGCTAGAGCCGTGCTCAAGAACCCACCTGTC
CTCATATTGGATGAGGCTACAAGTGCTTTAGACTCAGCGAGCGAGAAAGT
AGTACAAACAGCGCTAGAGACTGCGGCTAAAGGTCGCACCGTACTCGTCA
TAGCGCACCGACTGTCCACGGTCATGAATGCAGACCTTATTGTCGTGCTG
AACAAGGGGAATATTGTGGAGATGGGCACCCACGCTCAATTGAAGAAGCA
AAAAGGTTTCTACTGGAACCTCATTAAGCAGCAGGATCAGTCGGCTGAAG
CTAACACGGCTGGCATCGCTAGCATGGCTTTATGAGACCATTTCGAGGTA
CAATCTAGCGACAAATAAGAGCAATTGAATTTGACACTAAAGGAATTGGT
AATAAAGTGTATTATTTTGTAGGGAGCAATCAGTTAGAAAACGGAGCAAT
TGAATTTGACACTTAAGGAACTGGTAATAAAGTATATTATTTTGTAGGCA
GCAATCAGTTAGAAACCACAGCAATTGAATTTGACACTTAAATAACTGGT
AATAAGGTATATTATTTTGTAGATACTCGAGTGATCAGTTAGAAACCGGA
GCAATTGAATTTAACACTTAAGGAATTGGTATTAAAGTATATTATTATTT
GTGGATACTCGAGTAATCAGTTAGAAACCGAAGCAATAGAATTTGACACT
TAAGGAAATGGTAATAAAGTATATTATTTTGTAGGCAGCAATGAGTTAGA
AACCGGAGCAATTGAATTTGACACTTATGGAAATGGTAATAAAGTGTATT
ATTTTATAGACACTAGTTAACCAGTTAGCAACCGGAGCAATTGAATTTGA
AACTTAAGGAACTGGTATTAAAGTATATTATTATATAGATATTCCGGTAT
TCAATTTGCAACCGACAACTCCGGAGGTGTTTGTTTTGATGTCTCTCGTT
TTGTTAGTTCGTGGTCTGAGGAATAGGGTTTGTAGGACCCACGACACTGG
AGAAAATTCTATCATGAAGCTTCTATATAGCAGAAAAAATATCAATAAAC
TAGATTGTGTGAGAAATTATGTAAAAGAAAAATATTGTGATGTGATGAGC
CGACACTTAGTGACTTATGATAAGTAAAGATATTTACATTATATATTTAT
TATTGCACGTAGTTTTAAAAATACACAATGCAGTAATGAAGAAAAACCTG
CTTAATACTGTGAAATAGAGTACTCAATAAATTAGTCCATAGTTAGTTGA
AATTATAAAATAAAATCATTGTTTTTGAAGTTAGATGGAACTGTTACACC
TTTATAAACCTTATTTCGTGACCAATGACAGCTGTAAAAAGTGACAGTTG
ACAGATGTAAGTGACGTTTCTATTCTTATTTATGATCCGGCCGTCTCAAT
TTTCTTATGCCTTCACAATAATACGAATAATTTAATTTGTTATCCTGTAT
ATTCTGAGGGCTTAGTACGAGTTTCTGTTTAACGAGATCGAAGCATTACT
GCGTTCCGTGATATGATTGGCTGCTACAATGAACCAACCAATTAGAGCGC
TGAACGCGGTAACGTTTACATGTAACGCACTTGTGTTGCTACCAATAGTA
GGTAGTGTAAAAACTATTAGCTCAATTTAGCTATCTTTTTTAATTAAAAT
ATTGGTTATTTAATTGTATACAAGTGTATACTGTTTAGTCCTGATTTTTA
TAACAAATGGCTACCTATAAGTGCTAGTGATTAGTTTTAAGGGTAATTAA
TTTATTTACTTGTTTTATTTTGATTACGAAATTCTCAGTAAGATCACAGA
ATCTAAGAAAGTTATGATTAAGTTCAATCTAAGATGTTCAAAATGATAAA
GACGTATATTGATGTAATTGCATCTGAGTGTCAGTATAACGATACGCTTA
TTCTACAAAGGCCGGTTCACAATTCAGATCGAACAACTGACCATATATTA
GATTCTGTGCGGTTATTGCGAATTTTCACAAAGATACTATTTTGTGAATC
ACAAATGTAATGTATATGGTGTGTATTAATTTTTCAGGTTATTTTTTAGT
AATAAAAGTAAACAATTTATTTATTTACATAGCAAAATGTATTAAAGTGT
CCTTACATTGATTGATGAATTCCACTTCCACAATAAAATGAACGAAACTG
TAGGCTAAATATTATATAGTTGTTAATAATTTTGTAATTACAGTCGACTA
CTATAATAAAATTCATCACCTTCGATAATAGTATTTTTTTTTTATGATCG
TATGGGAGCTTATTTTAAAACATTAAACACGTATTTTTTTATTTTCTCAC
TGAAACAAATACTTTCATCGATATAATATTGATTTAAAATATCGTGTGAC
ATCATTTCTAGGAATGTTTTATACGTAGAAAGTATTGTTATCTTACATGA
TAATATAAAAAAATACGTGTCTATTTTTTTATTACGGACTAATTCGATTT
TTAATTTTCATACCATCATCATGTACCTAAATTCTGAGGCAAGTTCAAAT
TTCGGACCATTTGATATTTTGGTCATTCGGTAATTCGAAATATTGTAAGA
GTCCCTTCAATTTAGAATTAACGATAGTCGACTGTATTACTATAAGATGT
AAAGTTCCTTTTTAAATGTTGCAGTTTGGATTTGTATCAGTTTTCATGTA
TGAGTTTGTAATCATGGTGGGAAGTAAGTATTGGGAGATAATAAATAAAT
ATTGTTAC
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protein sequence of SFRICE002695-RA

>SFRICE002695-PA ID=SFRICE002695-PA|Name=SFRICE002695-RA|organism=Spodoptera frugiperda rice|type=polypeptide|length=705bp
MWQLLQTSSCQLVRQRLLTAKSNVYFTNLMKNRPSNVVKRYFSEVKTSSE
KNAKPGLLLLCSPWKLCTGVSLALGARYFLSNGPAYCKAHTVPSRVIQRR
PNVEEDNAKFDWDKFLSYLQPHKWLLMAAVGSALVVAFFNVYIPAVLGEV
VNVLANQRSNPTADFMDNIRTPALKLVALYIGQAIFTFMYIHLLSQVGER
VAAQMKQELFESILRQDIAFFDQERTGELVNRLTVDVQDFKSSFKQTISG
GLRATTQVVGSSVSLLVISPQLTGLTLLCVPSVVIGGTFIGSLLRKLSRE
AQSQIEKSTLVAEEAIANMRTVRAFAGEENEAQLFAQECKAAAELSMELG
LGIGLFQAGTNLFLNGMVLGTMFMGGHLMASGQMSAGDVMAFLVNAQTVQ
RSVAQLSLLFGSVVKGLSAGGRVFEYINKKPVMDSSGSKVIRYHEFHGDI
EFKDVSFSYPSRPEATVLKNFNLKIPAGKTVAIVGTSGNGKSTIACLLER
FYDVDAGQVTIDGVDVREMDCKWLRGRALGIISQEPVLFATTVKENIRYG
RPEASDEDVYRAAQTANAHDFIVGFPNGYDTLVGERGMSLSGGQKQRIAI
ARAVLKNPPVLILDEATSALDSASEKVVQTALETAAKGRTVLVIAHRLST
VMNADLIVVLNKGNIVEMGTHAQLKKQKGFYWNLIKQQDQSAEANTAGIA
SMAL.
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mRNA from alignment at SFRU_RICE_004261:11472..21840-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>SFRICE002695-RA ID=SFRICE002695-RA|Name=SFRICE002695-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=10369bp|location=Sequence derived from alignment at SFRU_RICE_004261:11472..21840- (Spodoptera frugiperda rice)
TATTTCTGAACTGAAACGATTACGTCATTGTCACGACAATGACATTGATA
AAAGATTGAGGTTATCAAATCAATTTTCAGGAAATAATCTACATAATCTT
GATAATTAAGAATAAAATTATGTGTAATTAAGTGTTTGCCTCGTAGAATA
TTAAGTGTAATTTTATAAAAATGTGGCAATTGCTGCAAACGAGCTCTTGT
CAGCTTGTTAGACAAAGGTAAATATTCGTGATCTTGGACTAATGAATACT
AATAAATAAACATGAAAGTTCACAGAATACTAACATAAACCATTCTTTAC
AGACTGCTAACGGCTAAAAGCAACGTATATTTTACGAATCTTATGAAGAA
TAGACCGTCAAATGTCGTAAAACGATATTTTTCGGAGGTCAAAACTTCGT
CGGAGAAAAATGCAAAGCCAGGGTTGTTGCTGCTCTGTAGTCCATGGAAG
TTGTGTACCGGGGTCAGTTTAGCGTTGGGAGCTCGCTATTTCCTTAGCAA
CGGTCCGGCTTACTGCAAGGCCCACACAGTTCCTTCTAGGGTTATTCAAA
GGAGGCCAAATGTTGAGGAAGACAATGCTAAGTTTGACTGGGATAAATTC
CTCTCTTATTTACAACCTCATAAATGGCTTTTAATGGCTGCTGTAGGGGT
AAGTACACTGCGTAACAATTTGCTTTTAATTTTGAATTATTGTCATAAAA
TTGATTCAATATCAAAGTTTAAACTGTTATATAAAAAACTTAATATTTTT
ATCTGTACTGTATTTTGTTGTGTTTGTGTGAACATGGCAACATTTCATAA
AGTGTTTCCATGTAGAATAATGATATCTGACAGAATTTGAGTTAAATAGA
GTAAAATCTCATCAATCCCGACTCTGGTACAACAAAAATGACCAGGAAAC
TGGGTTCCCATTCAATAAAATAAATCTGACCTGTAAAAACTGCAATGAAA
ATGAAACCAACTACTAAACTGTCCCATAACTATTTCTAAATGATCAAATG
TTGTATCTCTTCCAGTCAGCATTAGTGGTGGCATTCTTCAACGTGTACAT
ACCAGCCGTGTTAGGAGAAGTTGTGAATGTATTGGCAAACCAAAGGTCGA
ATCCTACTGCAGACTTCATGGACAACATCAGAACACCCGCGCTCAAACTG
GTTGCCCTGTACATTGGTCAGGTAAAGATTTATTTTTAATTGTTGTATAA
GTTGGAAATTCAGACATTACAAAGTAGAGCTTTTCCTCATTAATTTATGT
GGGTAATCCGTGATTTTCTAGTTAACTAGTATAGTTAATAGCCTAGTTGT
TGAAAAAGTCTTACATAATGCATTTGTATGTGTGCAATTAACTCAGTAAT
AATTATACATGACTGCTTATGTCAATAGAATTCCTTACAACCACTCTCCA
ACAAGGTATTCTCATAAAATTTTATAATAAGCAACACCAATCCTTTTATG
CCCTAAAGCAAGAGGTGCAGTCACTTTTCACAATTTGTGTTATAAAGCCC
ATGTAATTAGGGGTGAGCCTATTGTCATATACTGGGCAGGATTCCAGGCT
CCATGCTACTACTGAGAAATTTTTAAAAAGCTGAAAAGAGCCCAATGTTT
CTTTACTCTACCCGGGAATTGAACCTGAGACTCCTTGTCCGGCAGTTGCA
ATTTCGACCAATCAATCAACATGGCAGTCATATCTATACTAATAATAATA
CTTATAAAGCTGAAGAGTTTGTTTGATTGTTTGTTTGAACGCGCTAATCT
CCGGAACTACTGGTCCGATTTGAATAATTCTTTTTGTGTTGAATAGTGCA
TTTATCGAGGAAGGCTATAGGCTAAAACATCACGCTATGACCAATAGCAG
CCAAGCAGAGCGGGTGAAACCGCGCGGAAGTAGCTAGTATTTTATAACAT
TTCAGGCAATATTCACATTCATGTACATCCACCTGCTATCACAAGTGGGG
GAGAGAGTGGCTGCACAGATGAAGCAGGAGCTCTTTGAGTCCATACTCAG
GCAGGACATCGCATTCTTTGACCAAGAGAGGACCGGCGAGCTTGTCAATA
GGTATGTATTGGATACTCAACTTTACATCAAAGTAGTTAAGTTAAAAATC
CAATGTAGTAGACTATTTGGAGTTGAGTTGTAAATTAAAATGTTTGTTTT
AAGTATAATCAATTAGTTTGAGTCATAAACCACCTTGATCACTTCCTGCA
TGAATTTATAAAAACCTGTTATAAAATATAATCAAAATAACTATAATAGT
CTTATAAAATGAGATCAAATCATTAGAAAAAAAATAGTATTTATATTTTA
GAAGTTTTTGAAAAGCGTACCCATATATAGCTTCGTATGCATAAAAGAAT
ATTTCACGAGACACTTTGTTTCAAGAATTTTGATTCAAGATTGAAAAAAA
ACTTATGTTACTTTATAACTAGGTACAGTAATTTTTATTAAATGATTATT
TCCCGCATTTCAGGTTAACAGTAGATGTCCAAGATTTCAAGAGTTCCTTC
AAACAAACTATTTCTGGTGGACTCAGAGCTACTACACAGGTTAGTTTCAT
TAATAGTAACCAACTAACTGACTTCATTGATGAAGTCAAAGACAAAACGA
AGTGCATTAATAACCACTGAGAATTTTGTAACATTAAAAACTGAGCACTA
CTTTACCCTATTTGATAATCAAAGCCGAAATATCAATCATACTTTACCTA
TAATACAATTCATAACTTTAAAATTGGTTACACATACATATTCATTGGTA
ATAGGAAGTCCCTTTAAAATCAGCCAATCAAAACACACACTTATTACCCA
CACAATAAAGACGCAAATTAAATTTCCAGGTGGTCGGTTCTTCAGTCAGT
CTGCTTGTGATATCACCGCAGCTAACAGGACTCACACTACTGTGCGTGCC
TTCAGTAGTCATTGGAGGCACATTCATTGGGTCCTTGCTTAGGAAGCTCT
CGCGAGAGGCGCAGTCGCAAGTGAGTGAATATTTGGTATAGTTATTTAGA
TATATGTAATCTCTGTAATCAATAATCTTAGTTTTAAAAATTATATAGAT
ATGTTACTGTTATAGCAAGCAATATCACAAACTGTGACGGTTTCCCAAAA
AAATAAGAAAAGTAAAACAAGAAAAAGTATTTTAAAAGTTGTGTGCCATA
GAGACTGTTCTAGGAGAACTTATTATAGACATTTTCAATTTTTTCTTAAA
AGGTTCTCGAAAAAATTCAGATGCAAAGTGCGTATTTTATATTTTAAAAC
ACTAGGATTTTCTCCAGTGTCGTGGGTCCGTTATCAAACATACAAGTTAA
CATTATGCGTGAAGCTATGTGTGTATGTTAAAAAAATGTCAGCACTAGCT
AGCGCGCTGCAGTTTCTGCCCAAGACAGTACATAAAAAGGATTTATGTAC
TTTTTAATTTATTATTATAACAATTCATTGAATAATAATTACAGATAGAA
AAATCGACTCTAGTAGCGGAGGAGGCGATAGCGAATATGCGCACTGTGCG
TGCGTTTGCAGGCGAGGAGAACGAAGCGCAACTGTTTGCGCAGGAGTGCA
AAGCGGCTGCTGAACTTAGCATGGAGTTAGGATTGGGTATCGGACTGTTC
CAAGCTGGAACTAATTTGTTCCTCAATGGGTAAGTAGAATAATAACTGAT
GCTAAATAGTTTGATCTTTGAAATGGGTAGAAATAACGGGTGATGGACTT
AGTAGGTACAATTGACGAAATTGAATTATGACCCACTACAACTCCTCGTT
GATCGTTGACTGCCTCGTTAGTCGGGTGGTCGCAAGTGCGACTGCCGGAC
AAGAGGTCTCGGGTTCGATTCCCGGGTCGGGCAAAGCATTACTGGCCTTT
TATCGGTTTTTCACTACCTCCCATTAAAATACGTGGCAGATAATTTTAAA
GCTTCTTATATAACTTATTTTAAATTTTCTCTTCCAGCATGGTCCTAGGT
ACAATGTTCATGGGTGGGCACTTGATGGCGTCTGGCCAGATGTCTGCCGG
TGACGTCATGGCGTTCCTTGTCAACGCACAGACCGTACAACGATCTGTTG
CGCAACTGTCCTTGTTATTCGGGTCTGTCGTGAAAGGACTCAGCGCTGGA
GGACGCGTGTTCGAGGTTAGATCTTATGTTAATTAGTTTAAGGTTGAATT
TTGTTTGTGGATGTTTGTTGGTTGGAAGTTTGTGCCGAAAAAAATCAGTG
CTGAAGTGCGTGTGTTCGAAGTTAGATCTTATGGTGTTTGGTTTAAGGTT
TAATTTTGTTTGTAGGTGTGTTATGTGACGTGTGTTATTGTTAACAATAA
TGAGGATGATGTACGGAAGGTACCCTTAGTACGAGTTTGCTTTACATTTA
AAGTAATGGAAACGGCGCATTCGGTGCTCTGATTAGTTGGTTTATTCGAG
CCGGCCAATCAGAGCACCGATGTTAGATAAAGTTTTACAATGCTATAACC
ATTACTCGTTACAATTCCAGTACATCAACAAGAAGCCGGTGATGGACAGT
TCTGGTTCGAAGGTGATCCGGTACCACGAGTTCCACGGAGACATTGAGTT
CAAGGACGTCAGCTTCTCATACCCTAGCAGACCTGAAGCGGTGGGTTTTA
TATTTTATTTAAACATTTTTTTATAATAAGTTGCTTTCGAAATTTGACTA
AAGTTTATTGTATTCCGTGGGGACCATTAAGCCTCTAGAAGTTGCTTTCG
AAATGTGACTGCAGTTTATTACTTTCCGTGGGCACTAATTTAGACGTGAT
GCTACTGAAAATTTCTGAAAATCGATAAAGGTAAGCTAAGAGGAAGGGGG
TAATTGGGCCTCCGGTAACCTCACTCACACAACGAAACATAACGCAAGCG
TTGTTTCACGTCGGTTTTCTGTGAGGCCGTGGTATCACTCCGGTCGAGCC
GGCCCATCCATGCCAAAGCATGCCTCTCTCACAATTTCTGAATTGAGAGA
GTTTGAGACTTCTCTTCTTGACTTTACTTTTCTTCACTTCCCACAGAGAA
AGATGCAGTATATAACTAAAATATATACATGTATTTACAGACAGTATTGA
AGAACTTCAACCTGAAGATACCGGCGGGTAAGACCGTGGCTATCGTCGGC
ACGTCTGGCAACGGCAAGTCTACGATAGCTTGTCTGTTGGAGAGGTAATT
ATTATACTTATATCTTACACTTATACTTCTTATTTTATAAAACATGTTAT
CGTACTATAGTTAAGTTAGTATACTAGTACTTTTCGTTGTATTGTGGGTG
CAATTACATACACGCAAACCAGAGTCAATAATTTGTAGATTACATAATAG
TTTTGTGTGGTAATCAAACCCGCGTCACGTTGTAGAGCAGCTAGTTGCCT
AACCCTCAAAAGAAAGACAGTCAATTGACTGCACGTTGACGTGGTGCCAG
GCAACGTGTAGCGGGCGATACAATTTCACATACACATGACACCCAGACCC
GAAACAATAATTTAGTGGATCACACAAACAGTTGCTACGAGCGGAAAACA
AACACGCTACACGTTAAATGGCATCCAGTTGTCCAGCCACCGCGCCAACC
GAAATTGCTTACCATCATATAATCCGTCTGATTTGCCGACCTATCCAGTA
AAAATACTACAAAACAATCAATATTTAATACTAAAAAATAAAAATAAATG
TCTGTATCTTCCAGGTTCTACGACGTAGACGCAGGCCAGGTTACAATAGA
CGGTGTAGACGTGCGGGAGATGGACTGCAAGTGGCTGAGGGGCCGAGCCC
TGGGCATCATCAGCCAGGAGCCCGTACTCTTCGCCACCACCGTCAAGGAG
AACATCCGATATGGACGACCTGAGGCCAGTGATGAGGATGTAAGTAGATA
AGTACATGAAAAGCTTTTCTACTAGAGACGTGCTATGCTACGTTGATACA
TATAGCTTAGCACTGGTAGAAGCAGACCCAGCTAAGCTATGTTTTTATAT
GGAAAGATGCGTGCTTTGGACCAACTATGCATATGGGTGCTATGAATATG
CTATGGATGGCTTTCCAATTATCAATACGTCGCATAATCGAGCTGCGCAT
CTTCCTCGCACAGCAACATTTAGGATACTACTTTACTTTTAAATATTTTG
TGATTTAAATTGCAAGTTGAGTTTCAACAAGATCCCTTGCTCGAAAATCA
TATTTGCTAGCATTTGACTGTCGTAACGGTATAGCAATATAAGACTTATT
ACCCTTTTATTTAAAACATAATTTAATTATAATTTCACAAGAATAACAAT
ATCTACCCCGTTTCAACCAGGTATACAGAGCCGCCCAAACAGCGAACGCT
CACGACTTCATAGTGGGCTTTCCCAACGGGTACGATACGCTAGTGGGGGA
GCGAGGTATGTCCCTCAGCGGGGGACAGAAACAGAGGATAGCCATCGCTA
GAGCCGTGCTCAAGAACCCACCTGTCCTCATATTGGATGAGGCTACAAGG
TACTGTACGAATCATCTATAATATAAAAATAAGTCGGGTTTTCCTTCCTA
AAGCTATAACTCAAGAAAAAATTAAGAGAAAGTAGGAAAACAATGAAAAT
CATTGGTGGCGAAACGGAGTTCGCCTGGTTTGCTAGTATTATTGTATTAT
ATATGTAATATCTGTCGTAAGATAATCTGAATTTGTAAAAATAAGAGCTC
TCGTTTTGGCTTGAAACTAGTCGATGTACCTCGAAAAGTTTCGTGACTAA
GCCGTATATTCTGACTATTTTAGTTTTATTTGTTATTTAGTTATTAATCA
TATTTGCAATCGAAGTGATTGCCCTTTAGACTTTGGGATATAATATTTGA
CCTCACTAATTTCAACTTTGTAGTAATGAGATAATAGAGTTCAAAGTTTA
ACGTCGTCGTGGCCCGTAGGTTTAAGACAACCGCTCCTCATGCATGAGCA
TGTGGGTTCGAAACCTACCAACGGCAAGTACCAATGTGACATTTTCCGAG
TTATATGTACTTTTTAAGATTGTGATGTGAGGAAACCTAGGCTTGTAATG
TCTAATTATAAGTTTGAAATCACCAACCCGCATTGAGCAAGTAAGCAATT
GTGGAGGTAATGCTCAAACCTTCTCTTTGTGAGAAGAGGCTTTGGTCAGC
AGTGGCTACTAATGCTGACTGTTGATGATGATGATGATAATAAGAGTTGA
AAGTCAAATCATTTTAAATAAGTGTTCTCAATGTTCCAGTGCTTTAGACT
CAGCGAGCGAGAAAGTAGTACAAACAGCGCTAGAGACTGCGGCTAAAGGT
CGCACCGTACTCGTCATAGCGCACCGACTGTCCACGGTCATGAATGCAGA
CCTTATTGTCGTGCTGAACAAGGGGAATATTGTGGAGGTAATGTTATTGT
TATGTGTTTTTTTAAGGGGGGAAAATCATCTAATGTCTTCTCCCGTAGTC
CGCAGCTCCGGATATGAGTTTGATCCTAGAGGGTAATTTTGACCCAAATT
AGACCAATGAAAGTATAATACACGTTTTGCTCTAGATTCTTTTTGGTTAT
AGGATTTGGATCAAAGTTTCCCCAGTGGGTCAAAATAATCCGAACTCATC
CTGTACGTCTTTTTTTCCTAAGAGGCAGAGACTCGCACGTTAAATATAAC
TCCCCTCTGTTTCGTAACAACGGTTGCGGAGAAAAACTTTTTGTTATATA
TGGAACTCAAAACCTAAATCATTACTGAAAATAGTTTAATAAGACTTAGT
CCGCTTTGAGAATCGAATCTAGGATCTCTTATTAATAAAAATCACAACAC
CTCATTGCCTCTAAAAGTCAATCAATACCATTTTTCTACAACAAGTTTCC
AGTTCTCATATTAACCAACCAATAATTTGTTTCACAGATGGGCACCCACG
CTCAATTGAAGAAGCAAAAAGGTTTCTACTGGAACCTCATTAAGCAGCAG
GATCAGTCGGCTGAAGCTAACACGGCTGGCATCGCTAGCATGGCTTTATG
AGACCATTTCGAGGTACAATCTAGCGACAAATAAGAGCAATTGAATTTGA
CACTAAAGGAATTGGTAATAAAGTGTATTATTTTGTAGGGAGCAATCAGT
TAGAAAACGGAGCAATTGAATTTGACACTTAAGGAACTGGTAATAAAGTA
TATTATTTTGTAGGCAGCAATCAGTTAGAAACCACAGCAATTGAATTTGA
CACTTAAATAACTGGTAATAAGGTATATTATTTTGTAGATACTCGAGTGA
TCAGTTAGAAACCGGAGCAATTGAATTTAACACTTAAGGAATTGGTATTA
AAGTATATTATTATTTGTGGATACTCGAGTAATCAGTTAGAAACCGAAGC
AATAGAATTTGACACTTAAGGAAATGGTAATAAAGTATATTATTTTGTAG
GCAGCAATGAGTTAGAAACCGGAGCAATTGAATTTGACACTTATGGAAAT
GGTAATAAAGTGTATTATTTTATAGACACTAGTTAACCAGTTAGCAACCG
GAGCAATTGAATTTGAAACTTAAGGAACTGGTATTAAAGTATATTATTAT
ATAGATATTCCGGTATTCAATTTGCAACCGACAACTCCGGAGGTGTTTGT
TTTGATGTCTCTCGTTTTGTTAGTTCGTGGTCTGAGGAATAGGGTTTGTA
GGACCCACGACACTGGAGAAAATTCTATCATGAAGCTTCTATATAGCAGA
AAAAATATCAATAAACTAGATTGTGTGAGAAATTATGTAAAAGAAAAATA
TTGTGATGTGATGAGCCGACACTTAGTGACTTATGATAAGTAAAGATATT
TACATTATATATTTATTATTGCACGTAGTTTTAAAAATACACAATGCAGT
AATGAAGAAAAACCTGCTTAATACTGTGAAATAGAGTACTCAATAAATTA
GTCCATAGTTAGTTGAAATTATAAAATAAAATCATTGTTTTTGAAGTTAG
ATGGAACTGTTACACCTTTATAAACCTTATTTCGTGACCAATGACAGCTG
TAAAAAGTGACAGTTGACAGATGTAAGTGACGTTTCTATTCTTATTTATG
ATCCGGCCGTCTCAATTTTCTTATGCCTTCACAATAATACGAATAATTTA
ATTTGTTATCCTGTATATTCTGAGGGCTTAGTACGAGTTTCTGTTTAACG
AGATCGAAGCATTACTGCGTTCCGTGATATGATTGGCTGCTACAATGAAC
CAACCAATTAGAGCGCTGAACGCGGTAACGTTTACATGTAACGCACTTGT
GTTGCTACCAATAGTAGGTAGTGTAAAAACTATTAGCTCAATTTAGCTAT
CTTTTTTAATTAAAATATTGGTTATTTAATTGTATACAAGTGTATACTGT
TTAGTCCTGATTTTTATAACAAATGGCTACCTATAAGTGCTAGTGATTAG
TTTTAAGGGTAATTAATTTATTTACTTGTTTTATTTTGATTACGAAATTC
TCAGTAAGATCACAGAATCTAAGAAAGTTATGATTAAGTTCAATCTAAGA
TGTTCAAAATGATAAAGACGTATATTGATGTAATTGCATCTGAGTGTCAG
TATAACGATACGCTTATTCTACAAAGGCCGGTTCACAATTCAGATCGAAC
AACTGACCATATATTAGATTCTGTGCGGTTATTGCGAATTTTCACAAAGA
TACTATTTTGTGAATCACAAATGTAATGTATATGGTGTGTATTAATTTTT
CAGGTTATTTTTTAGTAATAAAAGTAAACAATTTATTTATTTACATAGCA
AAATGTATTAAAGTGTCCTTACATTGATTGATGAATTCCACTTCCACAAT
AAAATGAACGAAACTGTAGGCTAAATATTATATAGTTGTTAATAATTTTG
TAATTACAGTCGACTACTATAATAAAATTCATCACCTTCGATAATAGTAT
TTTTTTTTTATGATCGTATGGGAGCTTATTTTAAAACATTAAACACGTAT
TTTTTTATTTTCTCACTGAAACAAATACTTTCATCGATATAATATTGATT
TAAAATATCGTGTGACATCATTTCTAGGAATGTTTTATACGTAGAAATGG
CGTATTTGCTCCCACTCCTAAACTTTGATTCATTTTATCTAAGTATTGTT
ATCTTACATGATAATATAAAAAAATACGTGTCTATTTTTTTATTACGGAC
TAATTCGATTTTTAATTTTCATACCATCATCATGTACCTAAATTCTGAGG
CAAGTTCAAATTTCGGACCATTTGATATTTTGGTCATTCGGTAATTCGAA
ATATTGTAAGAGTCCCTTCAATTTAGAATTAACGATAGTCGACTGTATTA
CTATAAGATGTAAAGTTCCTTTTTAAATGTTGCAGTTTGGATTTGTATCA
GTTTTCATGTATGAGTTTGTAATCATGGTGGGAAGTAAGTATTGGGAGAT
AATAAATAAATATTGTTAC
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Coding sequence (CDS) from alignment at SFRU_RICE_004261:11472..21840-

>SFRICE002695-RA ID=SFRICE002695-RA|Name=SFRICE002695-RA|organism=Spodoptera frugiperda rice|type=CDS|length=2115bp|location=Sequence derived from alignment at SFRU_RICE_004261:11472..21840- (Spodoptera frugiperda rice)
ATGTGGCAATTGCTGCAAACGAGCTCTTGTCAGCTTGTTAGACAAAGACT
GCTAACGGCTAAAAGCAACGTATATTTTACGAATCTTATGAAGAATAGAC
CGTCAAATGTCGTAAAACGATATTTTTCGGAGGTCAAAACTTCGTCGGAG
AAAAATGCAAAGCCAGGGTTGTTGCTGCTCTGTAGTCCATGGAAGTTGTG
TACCGGGGTCAGTTTAGCGTTGGGAGCTCGCTATTTCCTTAGCAACGGTC
CGGCTTACTGCAAGGCCCACACAGTTCCTTCTAGGGTTATTCAAAGGAGG
CCAAATGTTGAGGAAGACAATGCTAAGTTTGACTGGGATAAATTCCTCTC
TTATTTACAACCTCATAAATGGCTTTTAATGGCTGCTGTAGGGTCAGCAT
TAGTGGTGGCATTCTTCAACGTGTACATACCAGCCGTGTTAGGAGAAGTT
GTGAATGTATTGGCAAACCAAAGGTCGAATCCTACTGCAGACTTCATGGA
CAACATCAGAACACCCGCGCTCAAACTGGTTGCCCTGTACATTGGTCAGG
CAATATTCACATTCATGTACATCCACCTGCTATCACAAGTGGGGGAGAGA
GTGGCTGCACAGATGAAGCAGGAGCTCTTTGAGTCCATACTCAGGCAGGA
CATCGCATTCTTTGACCAAGAGAGGACCGGCGAGCTTGTCAATAGGTTAA
CAGTAGATGTCCAAGATTTCAAGAGTTCCTTCAAACAAACTATTTCTGGT
GGACTCAGAGCTACTACACAGGTGGTCGGTTCTTCAGTCAGTCTGCTTGT
GATATCACCGCAGCTAACAGGACTCACACTACTGTGCGTGCCTTCAGTAG
TCATTGGAGGCACATTCATTGGGTCCTTGCTTAGGAAGCTCTCGCGAGAG
GCGCAGTCGCAAATAGAAAAATCGACTCTAGTAGCGGAGGAGGCGATAGC
GAATATGCGCACTGTGCGTGCGTTTGCAGGCGAGGAGAACGAAGCGCAAC
TGTTTGCGCAGGAGTGCAAAGCGGCTGCTGAACTTAGCATGGAGTTAGGA
TTGGGTATCGGACTGTTCCAAGCTGGAACTAATTTGTTCCTCAATGGCAT
GGTCCTAGGTACAATGTTCATGGGTGGGCACTTGATGGCGTCTGGCCAGA
TGTCTGCCGGTGACGTCATGGCGTTCCTTGTCAACGCACAGACCGTACAA
CGATCTGTTGCGCAACTGTCCTTGTTATTCGGGTCTGTCGTGAAAGGACT
CAGCGCTGGAGGACGCGTGTTCGAGTACATCAACAAGAAGCCGGTGATGG
ACAGTTCTGGTTCGAAGGTGATCCGGTACCACGAGTTCCACGGAGACATT
GAGTTCAAGGACGTCAGCTTCTCATACCCTAGCAGACCTGAAGCGACAGT
ATTGAAGAACTTCAACCTGAAGATACCGGCGGGTAAGACCGTGGCTATCG
TCGGCACGTCTGGCAACGGCAAGTCTACGATAGCTTGTCTGTTGGAGAGG
TTCTACGACGTAGACGCAGGCCAGGTTACAATAGACGGTGTAGACGTGCG
GGAGATGGACTGCAAGTGGCTGAGGGGCCGAGCCCTGGGCATCATCAGCC
AGGAGCCCGTACTCTTCGCCACCACCGTCAAGGAGAACATCCGATATGGA
CGACCTGAGGCCAGTGATGAGGATGTATACAGAGCCGCCCAAACAGCGAA
CGCTCACGACTTCATAGTGGGCTTTCCCAACGGGTACGATACGCTAGTGG
GGGAGCGAGGTATGTCCCTCAGCGGGGGACAGAAACAGAGGATAGCCATC
GCTAGAGCCGTGCTCAAGAACCCACCTGTCCTCATATTGGATGAGGCTAC
AAGTGCTTTAGACTCAGCGAGCGAGAAAGTAGTACAAACAGCGCTAGAGA
CTGCGGCTAAAGGTCGCACCGTACTCGTCATAGCGCACCGACTGTCCACG
GTCATGAATGCAGACCTTATTGTCGTGCTGAACAAGGGGAATATTGTGGA
GATGGGCACCCACGCTCAATTGAAGAAGCAAAAAGGTTTCTACTGGAACC
TCATTAAGCAGCAGGATCAGTCGGCTGAAGCTAACACGGCTGGCATCGCT
AGCATGGCTTTATGA
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Synonyms
The feature 'SFRICE002695-RA' has the following synonyms
Synonym
SFRICE002695-PA
SFRICE002695
maker-SFRU_RICE_004261-augustus-gene-0.19-mRNA-1