SFRICE014493-RA (mRNA) Spodoptera frugiperda rice

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameSFRICE014493-RA
Unique NameSFRICE014493-RA
TypemRNA
OrganismSpodoptera frugiperda rice (Fall armyworm - rice variant)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
SFRU_RICE_004404contigSFRU_RICE_004404:7707..20906 -    View in Apollo
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Spodoptera frugiperda rice annotation OGS2.32015-12-04
Properties
Property NameValue
Full nameSFRICE014493
eAED0.14
QI158|1|1|1|1|1|10|162|551
AED0.14
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
SFRICE014493SFRICE014493Spodoptera frugiperda ricegeneSFRU_RICE_004404 7707..20906 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE014493-RASFRICE014493-PASpodoptera frugiperda ricepolypeptideSFRU_RICE_004404 7869..20748 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE014493-RA-exonSFRICE014493-RA-exon-10Spodoptera frugiperda riceexonSFRU_RICE_004404 7707..8010 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-9Spodoptera frugiperda riceexonSFRU_RICE_004404 8573..8778 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-8Spodoptera frugiperda riceexonSFRU_RICE_004404 9217..9372 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-7Spodoptera frugiperda riceexonSFRU_RICE_004404 9858..9958 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-6Spodoptera frugiperda riceexonSFRU_RICE_004404 10447..10615 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-5Spodoptera frugiperda riceexonSFRU_RICE_004404 12767..13017 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-4Spodoptera frugiperda riceexonSFRU_RICE_004404 13788..14026 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-3Spodoptera frugiperda riceexonSFRU_RICE_004404 15575..15720 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-2Spodoptera frugiperda riceexonSFRU_RICE_004404 17825..17961 -
SFRICE014493-RA-exonSFRICE014493-RA-exon-1Spodoptera frugiperda riceexonSFRU_RICE_004404 20640..20906 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE014493-RA-three_prime_UTRSFRICE014493-RA-three_prime_UTR-22Spodoptera frugiperda ricethree_prime_UTRSFRU_RICE_004404 7707..7868 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-10Spodoptera frugiperda riceCDSSFRU_RICE_004404 7869..8010 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-9Spodoptera frugiperda riceCDSSFRU_RICE_004404 8573..8778 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-8Spodoptera frugiperda riceCDSSFRU_RICE_004404 9217..9372 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-7Spodoptera frugiperda riceCDSSFRU_RICE_004404 9858..9958 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-6Spodoptera frugiperda riceCDSSFRU_RICE_004404 10447..10615 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-5Spodoptera frugiperda riceCDSSFRU_RICE_004404 12767..13017 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-4Spodoptera frugiperda riceCDSSFRU_RICE_004404 13788..14026 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-3Spodoptera frugiperda riceCDSSFRU_RICE_004404 15575..15720 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-2Spodoptera frugiperda riceCDSSFRU_RICE_004404 17825..17961 -
SFRICE014493-RA-CDSSFRICE014493-RA-CDS-1Spodoptera frugiperda riceCDSSFRU_RICE_004404 20640..20748 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE014493-RA-five_prime_UTRSFRICE014493-RA-five_prime_UTR-11Spodoptera frugiperda ricefive_prime_UTRSFRU_RICE_004404 20749..20906 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>SFRICE014493-RA ID=SFRICE014493-RA|Name=SFRICE014493-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=1976bp|location=Sequence derived from alignment at SFRU_RICE_004404:7707..20906- (Spodoptera frugiperda rice)|Notes=Excludes all bases but those of type(s): exon.  
ATAAGGAATTCAGTTAGCAAAGAATGTGGAATTTCCATGAGAAACCCTAA
CAATGGCATGAAGTATCTATCTAACATGAATGTGTTATTGTTATAGGTAG
CAAACAAATTCTCCATGGAGTCAACGGCAGACTTCGTCCGCGTCAGCTTA
TCGCCATCATGGGGCCTTCAGGAGCTGGCAAGTCCACACTCCTTGATGTA
CTGTCTGGGTACCGCATCACCGGCGTCGGGGGAGCAGTCTTCATCAATGG
GAGGGGGAGGATTATGAAGAGGTTCAAGAGGATGTCATGTTACATCCAGC
AAGACGACCGGCTCCAGGGTCTACTGACTGTCGGTGAGAACATGGCGCTG
GCAGCCGATCTGAAGCTACCCACCAAATTAGACAAATACGAGAAGGGAGA
AGTTATTGAAGATATCCTTACAAACTTGGGTCTGTACGAGCATATGAACA
CAAGAGGTGCCCAGCTGTCCGGAGGTCAGAGGAAGAGGTTATCCATCGCC
CTGGAGCTCATCAACAACCCTCTCATCATGTTCCTCGATGAACCTACAAC
GGGTCTAGACAGTTCGTCATGTACACAAGTAGTCCAGCTGTGCCAGAGCC
TGGCACACCAGGGTCGGACCATCGTTTGTACCGTGCACCAGCCTTCAGCC
TCACTCTTCGCGCTGTTTGACCAGGTGTATGTCCTGGCTGCAGGGCGATG
CATGTACCAAGGCACCACGAAGAACCTGGTGCCTTATTTGCAGCAAGCTG
GGATTCCTTGCCCTATATACCATAACCCTGCTGATTATATTATCGAGCTC
TCATGTGGTGAATATGGCCAGGACAAAATAGACCTTATGGCAAATAAATC
AGAAAATGGCAAAGCACTGGATTGGTTTGACGACCACCAGTCGATCCCGT
CTATGGAAGGACTCCGTAAACTGGTGCCACTGAGTGTGCTGAGAGACACG
GAACCGACAGGAGGAGACGAGGAGACTAGCCAGTCCAACCAGCTCAGTGT
ACTTATGAGGAGAGGATTCTTGAAGGCTAAAAGAGATGCGACGATGACTC
ACCTGCGTTTGATAGTGAACGTGGTGGTAGGCATCATGTTGGGAAGTCTG
TTCATCAATGCTGGCAACGAAGGTTCAAGGGTGCTGGAGAACTATAACTT
GCTGTTCGCTATCCTCATGCACCACATGATGTCTCCGATGATGTTGACGA
TTCTCACCTTCCCTAACGAGATGTCGATATTGTCCAAAGAACACTTCAAC
AGATGGTACTCCTTGGGATCGTATTACATATCGATTACAATCGTCGATCT
ACCTGTATCGATAGTAGGCTGCGCAGTGTTCAGCGTGATAGTATACACGA
TGTCGTCCCAGCCGCTGGACATCGTGCGGTTCTCAATGTTCTTCGCGATC
TCTCTGTACACCGTATTGGTGGCGCAGAGCTTCGGGCTCATGATCGGAGC
CGTCTTCAGCGTTGTTAACGGCACATTCTTGGGCCCAACACTATCAGTAC
CGATGATGATGTTCGCCGGTTTCGGAGTCACACTTCGGGACCTGCCCTCA
TACCTACGCTGGGGATCCTACATCTCCTACCTGAGATATGGACTCGAAGG
TTTCATTGGCGCCATCTATGGCCTGAACAGGCCTATCCTCGACTGTAATG
AGGCTTTATATTGTCATTACAAACATCCCCGTACATTCCTAAACGAGGTA
GCGATGTCTCCTGATCAGTTCTGGTGGGATGTACTGGCACTATCCGTGTT
CGTGGTGACTCTCAGGATTGCAGCGTTCATCCTGTTGAAATGGAAACTGG
ATGCCGTGCGATAAATATGAAAAAGTTTGATTGTAGGAAAAGTGAATTCA
GTTCACTCGTAAGTCAGGAAATGTTGATTTATATAATAGGGTAGTTTTCT
TAAACTTTAAACTTATGTAATTTGGAATAGCGTGCGATAACAACAGGTAT
TCCCTACATCGCATTGCAATGAGTTA
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protein sequence of SFRICE014493-RA

>SFRICE014493-PA ID=SFRICE014493-PA|Name=SFRICE014493-RA|organism=Spodoptera frugiperda rice|type=polypeptide|length=552bp
MGPSGAGKSTLLDVLSGYRITGVGGAVFINGRGRIMKRFKRMSCYIQQDD
RLQGLLTVGENMALAADLKLPTKLDKYEKGEVIEDILTNLGLYEHMNTRG
AQLSGGQRKRLSIALELINNPLIMFLDEPTTGLDSSSCTQVVQLCQSLAH
QGRTIVCTVHQPSASLFALFDQVYVLAAGRCMYQGTTKNLVPYLQQAGIP
CPIYHNPADYIIELSCGEYGQDKIDLMANKSENGKALDWFDDHQSIPSME
GLRKLVPLSVLRDTEPTGGDEETSQSNQLSVLMRRGFLKAKRDATMTHLR
LIVNVVVGIMLGSLFINAGNEGSRVLENYNLLFAILMHHMMSPMMLTILT
FPNEMSILSKEHFNRWYSLGSYYISITIVDLPVSIVGCAVFSVIVYTMSS
QPLDIVRFSMFFAISLYTVLVAQSFGLMIGAVFSVVNGTFLGPTLSVPMM
MFAGFGVTLRDLPSYLRWGSYISYLRYGLEGFIGAIYGLNRPILDCNEAL
YCHYKHPRTFLNEVAMSPDQFWWDVLALSVFVVTLRIAAFILLKWKLDAV
R.
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mRNA from alignment at SFRU_RICE_004404:7707..20906-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>SFRICE014493-RA ID=SFRICE014493-RA|Name=SFRICE014493-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=13200bp|location=Sequence derived from alignment at SFRU_RICE_004404:7707..20906- (Spodoptera frugiperda rice)
ATAAGGAATTCAGTTAGCAAAGAATGTGGAATTTCCATGAGAAACCCTAA
CAATGGCATGAAGTATCTATCTAACATGAATGTGTTATTGTTATAGGTAG
CAAACAAATTCTCCATGGAGTCAACGGCAGACTTCGTCCGCGTCAGCTTA
TCGCCATCATGGGGCCTTCAGGAGCTGGCAAGTCCACACTCCTTGATGTA
CTGTCTGGGTACCGCATCACCGGCGTCGGGGGAGCAGTCTTCATCAATGG
GAGGGGGAGGATTATGAGTAAGTACTTATTTGTGCTATGGAGTTGAGTGA
CAAATGTTTACGATTTAAAAGGAATACTGGTCTGCAACAGATTTTTTTTA
CACGTTGCCCCGCACTACGATTTTCTCCTGTGTCGTGGGTGCGTTTACAA
ACATACAAGTTCACATACACATGACACCCAGACCCGAAACAACAATATTT
GTGGATCACACAAAGAATTGCTCCGTGCGGGAATCGAATCCGCTACACGT
TGCACGGCAGCCAGTTGCCTAGCCACCGCGCCATACGTGCAGTCAACGCA
GATTTAACCTGGTACATTTCAATGCTCTCGGCACTCGGGATCTTGAAATT
CTATTTATTAGCAAGAAGAACAGGTGGAACAATTTTTTATATAAATTGTT
GTTTCGTGCATTAGAATAACAAGGAGAGATCGTACGCGCAAGATTGGTAT
GTTCGTGACACTTAATTTAACTACCAAGAAGTCATTCGAAAAAAGATCTA
CCTACAACCAGTTTTGAAGTCAAACATAATGTTTGAACAGTCATTGAACA
ACCCAAATTCATTACCTGCGTAAACTAAAATACAAAGTCACATGCTAGCA
AAAAAATTCGTTAAATCTTTCAACAGTTAGTTACAAAATACATATATTTT
TATTGATTTAACATTTATATAGTTCTAAAACTATGAGACTGGTGTCTGTT
CGAGATTAAACCTGTGTTACAGATCACCAGGCCCGGGTGACCCCCGGAGA
CGTTGAACATAATTATAACATCACATACAAAAAAAAATATAGTCTAGAAA
ACTTAAGTGCAAAAGATTAAGCTTAAGTTAAACCTAGAAATATCAAATAA
AGTAAACTAAAAAATAAAACATGAAAGATGGACAAACATTTCATGAAATG
TCATTCATTAAGATCTTAATAAGCAGAAAAACAATATCAGTTAGCAATTA
GATTGCACTTGCGTTATCAGTGTAAAATAATTAGTAATGAACTAGAGGAC
CCGGATTCTAGGCGCTAGATAAACCTGGCTAGGTTACAGTTAGAACCACA
CTGACGCCGCCATGATATAACACATTCACGTGTGACATCGATGTATGCAA
TTCCAAAGGTAGATAATAAACTATGCGTCATCTGTCTGCTATATATTTGT
AGATATTATTTATATGAGTATCAATGGTTTTAAAAACGTGTTAATGTGTT
GTCAAGATGAAAGACTCGTGGGATTTTTGCATTTGGTTTTACTGTTAACT
CATTTATAGTCTTTGGACAAACGGATTTTTCTAACCCTTGATATAAGTAT
ATGAAGCGTGAATGATGATATATACAGTTTTGTTTCTGTAGAATGCACAC
TGTAATGATTTGAATCGTATCGTATCGTATGCAAAATGAGTGAATAAAAT
TATTATATTAAATATGAGTGTATAGGTTCATAATTTTGTTAAACCTGCTA
GGTTTTCCTTCTTTAATTGTATATTTTTTTACTTAATTGCCAAATGAAAA
CAAATAACGTATTTTTTTGAAGTTTTACTACAATATCTACTTGGCCTAAA
TAATCTAGAAGTACCTGATAATAAATTGTAGTATAATATACTACTCACTA
CAAAAGTTTTTAGAAAGCTTTTTAATCAAAATTTACTATTAGATTTTTCG
TTTAATTATTATCTATAGCAGCTTTCCTACATCAATGTTCCAGTTCCATA
ACATCCTACCAGTTTAACTAGTCTGCTCTAAGCCTAACCAGTAGCCCTGA
CCTGCCGATGTCTCGATTCCAACTAACTAGCACTCGATTCGCATGATAGT
AAAACGTGTCAATCATGAATGCACGATACCATAGCACTATGATACGATTT
ATAATCTTTGTGTGTTTAATGATTACCTTATCACTAACATAAATAAATCT
ATTTTAGTTAATCGTATGTGAAATCACACGTCTTCGCTATAACTATTGAA
TGTTCGCTACATATATTATGTTTTTCAAAGAAAGACAAAATTATTAATAC
ACCGTAGTCATGTTCCGGAGCTGCGGACTACCTAGCGGGTTTACCGGGGT
TCCGGCTCGAAAAGCAGGAGTAGGAACGGGGTTTTTAGTCAGTATGAGTT
CTGAGACTCCCTCTCGCCTCGCCCAAGGAATAATCGCCCGAGAATAGTCA
CTGGATGATTTCCCCCCTTTAAAAAAACCCGTAATCACGATGGTATTTTA
AAAAATATTTAAAAAAAAACAATACATTTGAAAAGAAATAGATAATGTAG
TTAGAGATTCATCAAGATTGCGTGAGAGTAATTTAGTGTTTGTAGATTTT
TAGAGCGCCACTGTCGATTTGGCAAGACGATGCGGTTGGAAGTATAAGGA
GAAAATGACCAACAAGATTGATTAAACTAAAAATTGCCGCACTCAGAGCC
AATTAATGATTACTGAAACTATTCCTTAGTAACGATGTTGTATCGAAAAC
AATCGTTAAGGACTGGGTTAAGTTACCATTAAATGACTCTGAGTGCGGCG
GTAAGTTTGTATGTACTCACACACACACAACGAAGGGGCCTTTTGTCCCC
GAAGGGGTAGGCAGAGGTGCACATTACGGCACCTAATGCCGCTTTACAAT
GTACACCCACTTTTCACCATTTATTTTAAGTCCCATGTAATAGGGGGTGA
GCCTATTGTATGTACTGTAGCTAAATATCTCATTTGTAATTACAGAGAGG
TTCAAGAGGATGTCATGTTACATCCAGCAAGACGACCGGCTCCAGGGTCT
ACTGACTGTCGGTGAGAACATGGCGCTGGCAGCCGATCTGAAGCTACCCA
CCAAATTAGACAAATACGAGAAGGGAGAAGTTGTAAGTATACTGAATAGT
AATTAGGTATAATACGCATTTTAGTATCGTCCTTAATAATGAATACTTTA
ACCAGTAAATATCATGATTTAGCTCATGAGATTGTCGACATGTGGAATGT
GGATTCAGCAATGATTTTGTCGTTAATCGTATCTGCCAATGGTCTCATAG
ACAAAAGTTTCGACCAACACCTGAGTAGGGTAACGTTAAATGGGTAGATC
AAGGGCCTAATGCAGAAAGCAGTACTTCAGAACACGGCGCTAATTATCCG
GAAATTCCTCTCGATTGATTTTATATGTTATTTTTTATAATATTTAGAAA
TGTATTGAACAAGTGTTAGAAAATAATTAAAATACTTTAATAATTTACTT
ACCAGTGACGGATAAAATGTAATAGTCAGATATAATTATTTAAAATTCTG
CTAGTTATCTTACTTATCGATAGTAGTTACGTAATGTTTTTACCATCATC
ATATTTATCATTAGTGGCAAGAAATAAGGTGCAGTTCAGTTTTTCTTAGA
CATTTTATTTACAAAATTTACCACAACTGGGTAGTGGCCTCATACTTCAA
AATATCTAAATCTGAATGCCAAAATACTTTGTTACTTAGTGGGTGGTAGG
GACAATGCTGACAAAGGCGTGCAATAAAACATGAATTCCCTTCCTTATAT
TCCGACAATATATATTTTCCGCACTGTGAGTAGGTACTGCCTACTGGTTT
TGTAGTAGGCACAGAAGATAACATATAAATCACGTAGTTCATAATTGCCA
TGCACGGACATGTTCTGAATGTTTATTTTAAATTCAATTTGCATTACATA
TGTATTTATTGCGGTTTGATTCTTTGACGTGTTTGAGGATACGAAATTCT
GTTTTATTTTTAAATAAGGATCATACATTATTGTTATAACAATTTGGCTG
TTCTGAAGAACTCTAGAATTTTGTAATTCTTCGTTGAACGAATAGGATAG
ATGATTATATGACTAATTTTTATTTTAATGTCCGTCTTGAGACACGTATT
TTTTTATTTACTTACGCAAACAAATACTTTCGAAGAAATTATATCGATTT
GAAATATCACGTGACGTCACTTCTAGGTACACGTTTAACGTAGAAATTAC
GTATTTGCTTCCACGTTCAAATTTTATATTTACTTATTAGCACTTCGAAC
TTTAGTATTTCTGTACATATTGCACTCTTACCCTCTGGAAAAATATAAAG
ACTGTGTAACATATCTCTATAACAACTAAACCTAATTTGATAGACCACAT
AACTATGTTCGTATAACAAGACAGAGACAAATGATTAGCATATTCTACAG
TAGCTAACGTCTACACATGTTCTGTTATTGTTGAAAAACAAAAGATACAA
AACAAAAGGCACTCGATGCTCCTTTCAAGCAAAACCTGGTAAACAAAATA
ACTCAATTATTATTACTAAGTTATTATTTAGTGTCATTGCACTTTATTTG
CACAAAACGGCATTTAAATACATACTCATAAAGTAAAATCATACGTTACG
TCATCGACCGGTATAACCTAATTTTGACAAATTGCATGGTGCGCAGAATT
CTAAGAAACGTAGTAATTTTGTTTTTGTATCATAATGTGTATGTAATTAT
CATTGAAATAATAATTCATTCAACATTTCAATAAATACTGACGTTTTTTA
TATATAAAACTACAATGAAAAAAATACTGAGTAATTTAAAGAAAAAATCT
TCTTTCACAATCAAATCTAAAATCAAATTTCAAAACAATCTTCTTTTTTT
TTAATTGAACTTTATTTTGTTGTCACTTGTTTTTTTTTCTTATTCCCACG
AATAGACAAAAGTCAATTTACATACGGCCAGTATTGGTATTCTAAAAATG
TATATTATACATTATGGAACTTATGCACCAAAATTTTATATAAGCGCAAA
ACAATTTTGTTCTTGAATTTAGTAATACCGTTTTAATTTGCAGTCGCAAG
CTTAGACTAATATTTAAAGTGCCATTAAGGTTATGGGCTATTAGAATGTT
TATTTAGTAGATATGTATCTATTTTTTTTATCCGACCACGGCGAAAAATA
TAACCGTTTTCTATAAATTTACCGTTACTCTTGCAGATTGAAGATATCCT
TACAAACTTGGGTCTGTACGAGCATATGAACACAAGAGGTGCCCAGCTGT
CCGGAGGTCAGAGGAAGAGGTTATCCATCGCCCTGGAGCTCATCAACAAC
CCTCTCATCATGTTCCTCGATGAACCTACAACGTAAGCTGACATTTTCAC
TTAGTCTTTACTTGACAATAATACAATAATAGGAGATATTAAAGCCATAA
TAGGAGATATTAAAGCCAGGGATATACTAAGGGGCAAATATCCCACGACA
TGTATCGGTGACATGTCAAGCGCATTTTTGCGCAATGTTGCCAGCCAAGT
CGACCAAAGATCGGCAACGTGGCGCTATTTCACATAACGTCGCTGGCGAC
ACGTGTCGCAGGTTACTTGTTCCCTAGTGTATCCTTCGCTTAGTAGGAAT
AGAATAATAGAACCCAAAGAGGCCAAAATACGGTTTCACCCGTTCTGCTT
GGCTCCTATTGGTCATAGCGTGATGTTTTATAGCCTATAGCCTTCCTCGA
TAAATGGACTAACCAACACAAAAAAGAATTACTCAAATCGGACCAGTAGT
TCCGGAGATTGGCGCGTTCAAACAAACAAACAAACTCTTCAGCTTTATAA
TATTATATATTAGTATAGTATAGATAATTTTCTGAATTAAGTTGAAGAAG
TACACAATCACTATAGATATAAATGGCTGTTAATTTATGGTTAGTTGTTA
AATTGTGCCTGTAAGGTATTAAAACCTAGAAGATCGGTGTTGACTAAGTT
AGCAACACAGTACGCAATACAAAATCAATTATCACAACGACCTACAGCTG
TAATTACTATTATTACTATCACCTTCATAGCCATTTTTGAATTACCTGCT
TATATAATCTGCTTTATCAGAGTTTGTGAAAATTTTTCTGATTAGCAGCA
TTTTTATTACAATAATCAGATTAAAACTATTACGTAAAGAATTGCAAAAA
ATATACTTATATGTACATGTAGAATATGCTTGTAACAAATAAGTTAAATA
AAATAAACATACATTAAAATAATAATGGAATATTGCTGATATTACTGCAT
TCCAAACCTTAAATGCATTCGTAATTTCCTCTGAACAATCACATAACAAC
TATGCTTGATAGTTTTGGTCTATTAATAGTAGTGTAATTAGAATTATTTC
CTCCACGCTTGAACTTTTACCCCACTGTGTGGAGATATCAGTAATGTGCA
CAAACATTGGATGCACGTGACATAGACACCCCGGGGTCATATCTAACTGA
CACATTATTTACTAATGATGGTTAATGAAACTCTAAATAAATAATTTTCT
TTCCTGATGGAAGTTTAATTTGGAAAAAGATTTGATTTTTGGTGTAATTG
GAATTGAATAAAGCTATGTTTAGGAATACGTTAGACATGTAGATACTACT
ACTTAATGACACGAAAATTCTGCGAAGTTTTTTATAAGTAGATAGATAGA
TAAAACATTTATATTTAAGTCACAAATTCACGACACGAGTTACTTTTCTG
CTGGTAATGAAAATGTATTTCAACGTTCAATGATTATTCTTAGACGCAAG
GAATTGAACAATCTTACAAAAATAAAATATTTGTGTGACCCGCAAGCCGT
TCCCACGAATGCTTAGCTTAGCTTAAGTTATACTTAATTGCTTTGGAAAA
TTGATACGAATCAACCATTCTCTCTTCCAGGGGTCTAGACAGTTCGTCAT
GTACACAAGTAGTCCAGCTGTGCCAGAGCCTGGCACACCAGGGTCGGACC
ATCGTTTGTACCGTGCACCAGCCTTCAGCCTCACTCTTCGCGCTGTTTGA
CCAGGTGTATGTCCTGGCTGCAGGGCGATGCATGTACCAAGGCACCACGA
AGAACCTGGTGCCTTATTTGCAGCAAGCTGGGATTCCTTGCCCTATATAC
CATAACCCTGCTGATTATAGTGAGTATACGTTTTTGTGTCTACTTTTACT
TAGACAATGCCTATATTTAACACCTTCGCTACGGTAATAAAATTTATTAC
TTACACCTGGTGCGGTGGCGGTCCAAACAAGCCTGCCATAAACTTTCAGA
CAGTGCGTGGCGGGCCTTTTGAGCCTGCCAATACTATAATGTCCTGTCAT
GTCCCGTACCGGCGGAAAGTTCTCACATTTCGCGTCCGCACTAGCTGGAA
GTCCCGCGGCAGGCCGATTATGGGTGATCCGCAATGAACGTGTTAACTAA
AGAAGACCAAAGAATTTACCATGTGGTTGCAGAGTAGAATATAACGTAAC
ATTATTGATTAGTTCCAATAAATAAGTTCGTAATATATTTTTATCTTTGA
CCTATCAAACTGAACAATAATTCAATGTTATTTTGTTAATTATATCTTAA
TAACACAAACACTCAGGAAGTAATTATAACTTCGTAAACATTCGTTAACA
ATTAAAAACAAACATTGCCTCACAATGTATCGTTCGAACGTTAATTATTT
CACATAGAGCTATCAACAAAATTCTATATTTGTATTTATGAAATGTTATG
CCTACTTAATTAAATAGGTACTTAATGTTCTTTTTACTTTCAAAAACTAA
AATTAACCCCAAAACCCCGTGTTCGCACGCACGATTAACCAATAAAAGCG
TTTATTATATACATGATTATTATTATCATCTGTTAAAATTATTAATTTTT
AACATTAATTATTATAAAAACTATGCTTTCTTTCTTCAGTTATCGAGCTC
TCATGTGGTGAATATGGCCAGGACAAAATAGACCTTATGGCAAATAAATC
AGAAAATGGCAAAGCACTGGATTGGTTTGACGACCACCAGTCGATCCCGT
CTATGGAAGGACTCCGTAAACTGGTGCCACTGAGTGTGCTGAGAGACACG
GAACCGACAGGAGGAGACGAGGAGACTAGCCAGTCCAACCAGCTCAGTGT
ACTTATGAGGAGAGGATTCTTGAAGGCTAAAAGAGATGCGGTAAGTACTG
TCTTTTTTTACATTACGTTGCACCACATTTGGATTTTCTCCGGTGTCATG
GGTGTGTTTACAAAAATACAAGTTTACACACATGCGCCCAGATCCAAATC
GACAATTTGTGGATCACAAGAGCTATAATCAAACCAGCTACACATTTCGC
AGCAGCCTGTTATTCAGTCACCGCTTCAACCATTCAGTCTGTCGTTTAAT
ACCTACGATGTCTAGTAAATCAAATTAAGTTCCTTGATGATCCATTGGAA
GTACCATACAATACAGCTGTATAAGTAAGTATGTATATTATACATATGAG
GAGAGGAGACAATGAAATCACGGAACTTAGCTGACGATAACAGTTTATAA
ATTACAATAGACATCAAATAAATTCGAATAACTTAATTGAACCTATTAGC
AATAGATCTATGCCAAGGACCCACAGTGTTTTAGAAACCCCGATTTTGTC
TCATGCCCTTTTTATTGTTAAAATCGTTAGTATATATCATTCTAAGCATT
TCAGCGAAAATCCGGCATCGATACGACTTAGTTTTGCCAAAAAAAATATC
GAAAGTTTCCCTATATCCGGGTCCGAAAAATCACAAAAATGTAAATATAA
AATAAAATATACAATTATTAAAAAAATAAAAATAAAGTTAAGTTGGCACT
CAAAACAAGAAACATTCTGTCCGTTTTTGGAATATGTAATGTTAATAGAT
TAGGAAATAATCATTGTTTTATTGTATTTCTTTTATATTTTTTATTTCAA
GTTTAACGCCATATTAGATTGAGATATTTATATAGTATACTCTTCATACG
TTAATCTATCAACATAAAAAAAATCACAATCTAATTCCACGTTATTCAAA
AGTTATTCGATTTTTTTTATTTTGGTTAGGGTTGTCACATCCGAATATCC
GGATTTATATTTCTTTTTATCGGCGGTTAAGACGCATGTCAGAAAAAGTA
TTATGGTTCTTCGTTTACATTCGAAACAACTAAATTTTCGTCATCTTCAT
AGTATGGAGTATTGTCTACACTGACATTCACAGGTTTCAGTAAACTAATC
GCTAATGCCGGCAGTGGATCTTCTTACTTAACTACAACATTTTGAAGGCA
GTGCAAAATATAACCAGTCGTCTCCGGGAAAAACGTACATAAACATGCAT
AAAAAAATCGCGATGAATTGAGAACCTCCTCCTTTTTTGAAGTCGGTTAA
AAAACACAGCCATCCTCTGACAAAAAACCCAAAAATACGTTTAATACTAT
AATGTTTATTAAAGTATGCTTTTTTAGGTTTTATAGACCGTGCCTGTATT
TGTTAGTTTTTTAAACTTAAAAATACTGGCACATAACATATTGTTTTTTT
TTATTGGGTTACTATGTTAACATGGCGTCAATAAATTAAAAGCAAATCAA
TTAATAGAAGGCAAATGTTATGCAGAACGCGAATGGAAATGCGAATTAAA
TAATAATTTAATTTGTGATTTAGTTTTGTGACAACCCTAAGTCTAAAAAG
TCCGGATATTATCAGGATATAACAAAAACTCTTAATAACTTTTGAATAAC
GCGGAATTAGATTGTGATTTTTTTTATGTTGATAGATTAACGTATGATGA
GTATACTATATAAATATCTCAATCTAATATGGCGTTAAACTTGAAATAAA
AAATATAAAAGAAATACAATAAAACAATGATTATTTCATAATCTATTAAC
ATTACATATTCCAAAAATGGACAGAATGTTTCTTGTTCTGAATGCCAACT
TAACTTTATTTTTATTTTTTTTTAATAATTGTATATTTTATTTTATATTT
ACATTTTTGTGATTTTTCGGACCCGAATATAGGGAGACTTTCGATAATTT
TTTTGGCAAAACTAAAAGTCGTATCGATGTCAGATTTTCGCTGTAATGCT
TAGAATGAGATATACTAACTATTTTAACAATAAAAAGGGCATGAGACAAA
ATCGGGGTTTCTAAAACACTGTGGGACCCTTCAACACTTGTACCGTTCGC
TCTTCCTAAAGAGATCTGAAACTTCCAATGTGCTGAAATTGTTAAGCAGT
TCTAAAACGTCCGCTTAGCAACGGATTTTATTTACCTCCTCCAATACACA
AATACTCAATAATGCTAATATTTACTCAACTCTACTTGCAGACGATGACT
CACCTGCGTTTGATAGTGAACGTGGTGGTAGGCATCATGTTGGGAAGTCT
GTTCATCAATGCTGGCAACGAAGGTTCAAGGGTGCTGGAGAACTATAACT
TGCTGTTCGCTATCCTCATGCACCACATGATGTCTCCGATGATGTTGACG
ATTCTCACCTGTAAGTATTTCTTATATAAACTTAATTTTAATGGGTCAAC
CAACCCTTTGCTATATAAATACCTGTGGGGCTTCTAATCCCTAAGTATCA
TTTGTTTGTTATGTGTAAACAGTATCAAAATACAACCAATACATAAATCA
GCACAGTTAAAATTAAAAGACAACTAATTCTAAAATGTTTTGCCTTAGTA
TGAGTTTGTTTTACTTTTAAAGTAATCGAAGCGAGAGCGTGTTCGGTGCT
CTGGTTGGTTGGTTTATTCGACCCGGCCAATCATAACGCCGAACGCACAG
AAAGCAAACTCATACTAAGGGTACTGCTAGTCTCTGTACTTTGATTCTGT
AACTGCGATTGCTCTTTAAATACCCCTTATCAATGCAGATAACTGTCATA
GATCAAGTAACAAAATGTATGTTTAGTAAACGAAATCTCATCTTTATTTG
TATCTGCATAAGGCTGTATTTTATATTTCTGTGTTTATTTGCTTGCAGTC
CCTAACGAGATGTCGATATTGTCCAAAGAACACTTCAACAGATGGTACTC
CTTGGGATCGTATTACATATCGATTACAATCGTCGATCTACCTGTATCGG
TAAGTATATGTCAGAAGCCGGTTATTAAAAAGTTACCTGTATAAATCTTT
GACTGTCAATTAGAAAACTGTTAAAGGCAAATCCTCCGCTAACGTCTATC
ACCGGTGACCACTACGGCGTTCAATATGTTAAAGAAATGCTTCTTAAAAA
TGAACTAAAACCACGGTTTACTCACGTAATTTAACGCGATAAGCTCTACT
AGTTTCGACTCACAGAGGGACTCTTCATCATGAGCAGCGTGCGCAGACGC
GGCGACGTCTCGCAGCCTACTAGAAGACAGTACTTCTTGGAAAAATAATA
ATAATTGAAAATATTTTTTTAATTTCCGAATCTTCTTTCGATATTTATAC
AGGGGTTCACTGTTATGTCCATGAAAAACCTAACTAACGTCAGTATTATT
TCGTTTGGGCTTACTTATCGCACACAGTTTGTTTTCGTTTTTTACACTTT
AGACTCTAACTTGACCTGTTTTCTGTTATTCCAGATAGTAGGCTGCGCAG
TGTTCAGCGTGATAGTATACACGATGTCGTCCCAGCCGCTGGACATCGTG
CGGTTCTCAATGTTCTTCGCGATCTCTCTGTACACCGTATTGGTGGCGCA
GAGCTTCGGGCTCATGATCGGAGCCGTCTTCAGCGTTGTTGTAAGTACAT
TTACTCATACGGTTCTAGATGAAAGAAATAAATAGACTAGTAACTATATA
ATTAATAGTAGATAAACTCTCAGCATATACAGCAGAATGAACAATCATAG
AAATTTTATTTCGTCGTCGATATTATGGACACATTTGAGCGGATTAGCTA
AATTAAACCTTACATGATTACCTAATAAAGTTTGGTTCAATTCCTATAAT
GAGACTTTCTCATTCCGGAATCTCTATATATAAAAATCAATTGCTGTTAG
TCTCGCTAAAACTCGAGAACGGCTAAACCGATTTGGCTATTTCTAGTCTT
GAATTAGTTGATAAAAAAATATTGGAGGCTGTACGGCGTTTGCCGGGCGA
GAATTGTAATAACTCACAATGGCATGGTTAATGACAGTGTCTTATAAAAT
TCATCAATACTATTCTATTTTTTACCAGAACGGCACATTCTTGGGCCCAA
CACTATCAGTACCGATGATGATGTTCGCCGGTTTCGGAGTCACACTTCGG
GACCTGCCCTCATACCTACGCTGGGGATCCTACATCTCCTACCTGAGATA
TGGACTCGAAGGTTTCATTGGCGCCATCTATGGCCTGAACAGGCCTATCC
TCGACTGTAATGAGGCTTTATATTGTCATTACAAGTAAGTGTTTTTATTA
TCTATACTATTAATTAATATTATAAAGCTGAAGAGTTTGTTTGTTTGTTT
GTTTGTTTGAACGCGCTAATCTCAAGAACTACGGGTCCGATTTGAATAAT
TCTTTTTGTGTTGGATAGCGCATTTATCGAGGAAGGTTATAGGCTATAAA
TCATTACGCTACGATCAATAGGAACCGAGCAGTGCGGGTGAAACCGCGCG
GAAGTAGCTAGTTTTTAGATATAGAGTTATTTGAATGCTAAATGACCTTG
AATTATAGATTCTGTTCCTCCGAAATTTTACGATAGTATTTTTCATTTAT
AGTTATAGTTTTTTGCCTTTAATAAAATCACCAAGGCAAATTAATTGATA
AAATACACTATATACTTTAGTATACACAATTATGACTACCTAGAATTGGT
AGATGAGGATCTATCGATTCTATTCTATACTGTCTTCTTTCTGTAACAAG
AGTCTCTTGTTAAAAACGGAGACAAAAGTGAACCACCTAATATTTGCCTA
TTATATTGCTCGCTCATTTACTATATTGTGTATTTATTATTTTCAGACAT
CCCCGTACATTCCTAAACGAGGTAGCGATGTCTCCTGATCAGTTCTGGTG
GGATGTACTGGCACTATCCGTGTTCGTGGTGACTCTCAGGATTGCAGCGT
TCATCCTGTTGAAATGGAAACTGGATGCCGTGCGATAAATATGAAAAAGT
TTGATTGTAGGAAAAGTGAATTCAGTTCACTCGTAAGTCAGGAAATGTTG
ATTTATATAATAGGGTAGTTTTCTTAAACTTTAAACTTATGTAATTTGGA
ATAGCGTGCGATAACAACAGGTATTCCCTACATCGCATTGCAATGAGTTA
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Coding sequence (CDS) from alignment at SFRU_RICE_004404:7707..20906-

>SFRICE014493-RA ID=SFRICE014493-RA|Name=SFRICE014493-RA|organism=Spodoptera frugiperda rice|type=CDS|length=1656bp|location=Sequence derived from alignment at SFRU_RICE_004404:7707..20906- (Spodoptera frugiperda rice)
ATGGGGCCTTCAGGAGCTGGCAAGTCCACACTCCTTGATGTACTGTCTGG
GTACCGCATCACCGGCGTCGGGGGAGCAGTCTTCATCAATGGGAGGGGGA
GGATTATGAAGAGGTTCAAGAGGATGTCATGTTACATCCAGCAAGACGAC
CGGCTCCAGGGTCTACTGACTGTCGGTGAGAACATGGCGCTGGCAGCCGA
TCTGAAGCTACCCACCAAATTAGACAAATACGAGAAGGGAGAAGTTATTG
AAGATATCCTTACAAACTTGGGTCTGTACGAGCATATGAACACAAGAGGT
GCCCAGCTGTCCGGAGGTCAGAGGAAGAGGTTATCCATCGCCCTGGAGCT
CATCAACAACCCTCTCATCATGTTCCTCGATGAACCTACAACGGGTCTAG
ACAGTTCGTCATGTACACAAGTAGTCCAGCTGTGCCAGAGCCTGGCACAC
CAGGGTCGGACCATCGTTTGTACCGTGCACCAGCCTTCAGCCTCACTCTT
CGCGCTGTTTGACCAGGTGTATGTCCTGGCTGCAGGGCGATGCATGTACC
AAGGCACCACGAAGAACCTGGTGCCTTATTTGCAGCAAGCTGGGATTCCT
TGCCCTATATACCATAACCCTGCTGATTATATTATCGAGCTCTCATGTGG
TGAATATGGCCAGGACAAAATAGACCTTATGGCAAATAAATCAGAAAATG
GCAAAGCACTGGATTGGTTTGACGACCACCAGTCGATCCCGTCTATGGAA
GGACTCCGTAAACTGGTGCCACTGAGTGTGCTGAGAGACACGGAACCGAC
AGGAGGAGACGAGGAGACTAGCCAGTCCAACCAGCTCAGTGTACTTATGA
GGAGAGGATTCTTGAAGGCTAAAAGAGATGCGACGATGACTCACCTGCGT
TTGATAGTGAACGTGGTGGTAGGCATCATGTTGGGAAGTCTGTTCATCAA
TGCTGGCAACGAAGGTTCAAGGGTGCTGGAGAACTATAACTTGCTGTTCG
CTATCCTCATGCACCACATGATGTCTCCGATGATGTTGACGATTCTCACC
TTCCCTAACGAGATGTCGATATTGTCCAAAGAACACTTCAACAGATGGTA
CTCCTTGGGATCGTATTACATATCGATTACAATCGTCGATCTACCTGTAT
CGATAGTAGGCTGCGCAGTGTTCAGCGTGATAGTATACACGATGTCGTCC
CAGCCGCTGGACATCGTGCGGTTCTCAATGTTCTTCGCGATCTCTCTGTA
CACCGTATTGGTGGCGCAGAGCTTCGGGCTCATGATCGGAGCCGTCTTCA
GCGTTGTTAACGGCACATTCTTGGGCCCAACACTATCAGTACCGATGATG
ATGTTCGCCGGTTTCGGAGTCACACTTCGGGACCTGCCCTCATACCTACG
CTGGGGATCCTACATCTCCTACCTGAGATATGGACTCGAAGGTTTCATTG
GCGCCATCTATGGCCTGAACAGGCCTATCCTCGACTGTAATGAGGCTTTA
TATTGTCATTACAAACATCCCCGTACATTCCTAAACGAGGTAGCGATGTC
TCCTGATCAGTTCTGGTGGGATGTACTGGCACTATCCGTGTTCGTGGTGA
CTCTCAGGATTGCAGCGTTCATCCTGTTGAAATGGAAACTGGATGCCGTG
CGATAA
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Synonyms
The feature 'SFRICE014493-RA' has the following synonyms
Synonym
SFRICE014493-PA
SFRICE014493
maker-SFRU_RICE_004404-augustus-gene-0.10-mRNA-1