Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
eAED | 0.37 |
QI | 0|0|0|1|1|1|4|0|188 |
AED | 0.37 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
SL2000891 | SL2000891 | Spodoptera littoralis | gene | scaffold45 432228..433994 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
SL2000891-RA:exon:369 | SL2000891-RA:exon:369 | Spodoptera littoralis | exon | scaffold45 432228..432416 - |
SL2000891-RA:exon:370 | SL2000891-RA:exon:370 | Spodoptera littoralis | exon | scaffold45 432763..432903 - |
SL2000891-RA:exon:371 | SL2000891-RA:exon:371 | Spodoptera littoralis | exon | scaffold45 433488..433640 - |
SL2000891-RA:exon:372 | SL2000891-RA:exon:372 | Spodoptera littoralis | exon | scaffold45 433911..433994 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
SL2000891-RA:cds | SL2000891-RA:cds | Spodoptera littoralis | CDS | scaffold45 432228..432416 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >SL2000891-RA ID=SL2000891-RA|Name=SL2000891-RA|organism=Spodoptera littoralis|type=mRNA|length=567bp|location=Sequence derived from alignment at scaffold45:432228..433994- (Spodoptera littoralis)|Notes=Excludes all bases but those of type(s): exon.
ATGAATAACATTAATAAATATTTGACTCGTCTATTTTTGATTGTGTATAT TATATTAATGCTAGTGTTTGGTTATTGGGCGTCCGATGCCTACCGCCAAG AACGAGCTAAACTGATATATGCGAACCCAAAGTACATAAAGGATCCAGTA GTATTCACTGGTAGAAGAAACCGAAATTCTCCGTACCAAACCAACATGAG CTGCACAACATTGGTGCCTTTTGGAAATAATGTTAGCTTTGCGACAACAT TCACAATGGTATCAGGTGGAGATTTCCGCCTGGTCACAAAAGCATGTGAC TGCAGTAAATCCAAGTGGATACACGACTTCATGCAATCGTACACAAACTT GACACTTAAAAAGTGCCCCTATCCTCCTGGAAGATACGCGTATTACAACA TAGAATTACCTCCAAAGAATATTCCCCTACCAATAGTTAAAGGTGACTAC TGGATCAAGTTTGAGTTCATCGTGACTGATACGAAGGAGTCTATTGTAGA AGTCGACTCATTACTGCACTATGATCCGACAGCTAATGCCAAGAGATCGA AGGGAAAGAAGGGTTAA back to topprotein sequence of SL2000891-RA >SL2000891-PA ID=SL2000891-PA|Name=SL2000891-RA|organism=Spodoptera littoralis|type=polypeptide|length=188bp
MNNINKYLTRLFLIVYIILMLVFGYWASDAYRQERAKLIYANPKYIKDPV VFTGRRNRNSPYQTNMSCTTLVPFGNNVSFATTFTMVSGGDFRLVTKACD CSKSKWIHDFMQSYTNLTLKKCPYPPGRYAYYNIELPPKNIPLPIVKGDY WIKFEFIVTDTKESIVEVDSLLHYDPTANAKRSKGKKG back to topmRNA from alignment at scaffold45:432228..433994- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >SL2000891-RA ID=SL2000891-RA|Name=SL2000891-RA|organism=Spodoptera littoralis|type=mRNA|length=1767bp|location=Sequence derived from alignment at scaffold45:432228..433994- (Spodoptera littoralis) ATGAATAACATTAATAAATATTTGACTCGTCTATTTTTGATTGTGTATAT
TATATTAATGCTAGTGTTTGGTTATTGGGCGTCCGTAAGTATTATTGCTT
TTATCATTTTTGTTTCTTGACATTTTTACACATCATGTTTCCTCCTATTT
ACCTAAGGGCAGAGACAATGGAACGAAAAATATTTTGATGATAGCTTATA
TGATTATACCTTTTGCATATTTGATGATACCTTTTGCTTCATCTACATTA
TATCAATTCATGCAAGGTCATACATGGTTTAAAGTTAAGCCTATTTGCGC
CTCCGTTTCATTAAAAACTGAGATTGGTAACCTTAAAAATGTATTGCTTC
GCAGGATGCCTACCGCCAAGAACGAGCTAAACTGATATATGCGAACCCAA
AGTACATAAAGGATCCAGTAGTATTCACTGGTAGAAGAAACCGAAATTCT
CCGTACCAAACCAACATGAGCTGCACAACATTGGTGCCTTTTGGAAATAA
TGTTAGCGTAAGTAAAACATTAAGCCTTTAACTGCCGACAAAAACTGTTG
AAGGTTAATCAACCCGATGTATGTATTACTATACTCTTTTGGCTAATCCT
CCGCTATTGTCGGTCATCATTGTCCGACACGACATCCAATGTGGTGGTTA
ACACTAAGTTATTCATAATTATAATTTGCTCGAACACTCTAGAATGTCAT
AGACCATCGAAATCCTATCACGGCCGTGGCTGTTCCACATGACCTACCTC
TAATAGCAGCTGATATTTGCAGCTACAATTATGCTAATACTGAAATAACT
AAAAATGCTGCAACATATATTTTTTTTTATGAACAAAAATTGGTTTAAAT
TTTACATCACTTGGAGAATTTTCAATTTGTTTATTGAGAGAAATAAAGAT
TTATACACAACAAATGTATAATGATGTAAAATAAAATAGGTACTTAAGTT
GTAAAAAAGACTGTAGGACTATAATACATTGCTCGATTGGCGAAATAAAT
TGAAGATTTGAAAAGAGGCAAGACATTTGACATCATTTTATAATGCCAGA
GGTCAAGTTTGAGTTAATAAAAACAATTTTCTTTATTTCAGTTTGCGACA
ACATTCACAATGGTATCAGGTGGAGATTTCCGCCTGGTCACAAAAGCATG
TGACTGCAGTAAATCCAAGTGGATACACGACTTCATGCAATCGTACACAA
ACTTGACACTTAAAAAGTGCCCCTATCCTCCTGTAAGTATGTGATAGAAG
ACTAATAAAGGGTAGCAAAAGATTTAGGGCACATACATCCTTGCCTAAGA
AAGGTTTTCCTTAAAATATAAAACTTATCAGGAAAAATAACTAGACTAAT
ATTAGGTATACATTCTATATTGAAAAAAATGGCTGTAGGTAAGGTACCAG
CAATCAATTGGTAATGCATCTTCAACTCGTTTTATATAATAATAATTTAC
GCTTTTGAAAGCAGCTAGCGTTATCTCGAAAAATATCTCTTTTATATTCA
ATGTGTTCTTTATTTCCAACAGTATCTGTATTTATGAATTAAATTTCTTC
AATACCTCTCACACATTATTTTTTACAGGGAAGATACGCGTATTACAACA
TAGAATTACCTCCAAAGAATATTCCCCTACCAATAGTTAAAGGTGACTAC
TGGATCAAGTTTGAGTTCATCGTGACTGATACGAAGGAGTCTATTGTAGA
AGTCGACTCATTACTGCACTATGATCCGACAGCTAATGCCAAGAGATCGA
AGGGAAAGAAGGGTTAA back to topCoding sequence (CDS) from alignment at scaffold45:432228..433994- >SL2000891-RA ID=SL2000891-RA|Name=SL2000891-RA|organism=Spodoptera littoralis|type=CDS|length=567bp|location=Sequence derived from alignment at scaffold45:432228..433994- (Spodoptera littoralis) ATGAATAACATTAATAAATATTTGACTCGTCTATTTTTGATTGTGTATAT TATATTAATGCTAGTGTTTGGTTATTGGGCGTCCGATGCCTACCGCCAAG AACGAGCTAAACTGATATATGCGAACCCAAAGTACATAAAGGATCCAGTA GTATTCACTGGTAGAAGAAACCGAAATTCTCCGTACCAAACCAACATGAG CTGCACAACATTGGTGCCTTTTGGAAATAATGTTAGCTTTGCGACAACAT TCACAATGGTATCAGGTGGAGATTTCCGCCTGGTCACAAAAGCATGTGAC TGCAGTAAATCCAAGTGGATACACGACTTCATGCAATCGTACACAAACTT GACACTTAAAAAGTGCCCCTATCCTCCTGGAAGATACGCGTATTACAACA TAGAATTACCTCCAAAGAATATTCCCCTACCAATAGTTAAAGGTGACTAC TGGATCAAGTTTGAGTTCATCGTGACTGATACGAAGGAGTCTATTGTAGA AGTCGACTCATTACTGCACTATGATCCGACAGCTAATGCCAAGAGATCGA AGGGAAAGAAGGGTTAA back to top
Synonyms
The feature 'SL2000891-RA' has the following synonyms
Synonym |
maker-scaffold45-augustus-gene-3.43-mRNA-1 |
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