Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
eAED | 0.00 |
QI | 0|-1|0|1|-1|1|1|0|253 |
AED | 0.00 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
SL2001527 | SL2001527 | Spodoptera littoralis | gene | scaffold296 257012..257773 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
SL2001527-RA:exon:2417 | SL2001527-RA:exon:2417 | Spodoptera littoralis | exon | scaffold296 257012..257773 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
SL2001527-RA:cds | SL2001527-RA:cds | Spodoptera littoralis | CDS | scaffold296 257012..257773 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >SL2001527-RA ID=SL2001527-RA|Name=SL2001527-RA|organism=Spodoptera littoralis|type=mRNA|length=762bp|location=Sequence derived from alignment at scaffold296:257012..257773- (Spodoptera littoralis)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAGCCCTCACACGCACTGTGTCCGACTTGTGCAGCCAGTTCTACCA ACGCATGGCTGAATTCGAGCAGGAGTTGAAGAGAACCCCAGATGCGGCCA CTGGACTGTCAGCAGACTTTGCTGCTTTTCGCCAGTTTATCATCCAAGCA CTGAGCACACTTCAGGAGCAAATGAAGGTAATGGCACTTTCTATCGATGG CATTGAAATGCGCAGCCGTCATAAAATACTGCTTATGCATGGGGTGCCTG AATCTGAGACGAATGCTGAGGATACTGCTCCAGTGGTGGTCAAAGTAGTC AAAGACCACCTTAATATTGACATCACACCAGCTGACATCAAGCGGTGCCG CAGAATGGGACGTTCTTCGCACAAACCCCGACCTATCCTGTTCAAACTTA AAGATGTGGCTCTCCGAAATAGAGTGTGGCTTGCCAAAACAAAGTTGAAA GGTTCGGGTATCACTCTCTCCGAATTTTTAACAAAAAGTCGACATAAAGT CTTTATGGCAGCTAGGGATAAGTTCGGTGTGAGTCAGTGCTGGACGAAGG AGGGCGTTGTGTTTGTCCTGGACTCAAAGGGATCCCGACACCGTGTTACG ACTATGGAGGACCTTGGTAAGGTCGAATCGCAGCCTGGTGGTAAACAGCA GCAGTCATCAGGACCATCGGAGCGGGTTGTTGTTGTTGCACAACCCGTGA CTGCCTCAGCCACCAGAACGGTCACTTCCAAGGCATCCAAACGTGCAGCG GCTCGCAAGTAA back to topprotein sequence of SL2001527-RA >SL2001527-PA ID=SL2001527-PA|Name=SL2001527-RA|organism=Spodoptera littoralis|type=polypeptide|length=253bp
MEALTRTVSDLCSQFYQRMAEFEQELKRTPDAATGLSADFAAFRQFIIQA LSTLQEQMKVMALSIDGIEMRSRHKILLMHGVPESETNAEDTAPVVVKVV KDHLNIDITPADIKRCRRMGRSSHKPRPILFKLKDVALRNRVWLAKTKLK GSGITLSEFLTKSRHKVFMAARDKFGVSQCWTKEGVVFVLDSKGSRHRVT TMEDLGKVESQPGGKQQQSSGPSERVVVVAQPVTASATRTVTSKASKRAA ARK back to topmRNA from alignment at scaffold296:257012..257773- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >SL2001527-RA ID=SL2001527-RA|Name=SL2001527-RA|organism=Spodoptera littoralis|type=mRNA|length=762bp|location=Sequence derived from alignment at scaffold296:257012..257773- (Spodoptera littoralis) ATGGAAGCCCTCACACGCACTGTGTCCGACTTGTGCAGCCAGTTCTACCA
ACGCATGGCTGAATTCGAGCAGGAGTTGAAGAGAACCCCAGATGCGGCCA
CTGGACTGTCAGCAGACTTTGCTGCTTTTCGCCAGTTTATCATCCAAGCA
CTGAGCACACTTCAGGAGCAAATGAAGGTAATGGCACTTTCTATCGATGG
CATTGAAATGCGCAGCCGTCATAAAATACTGCTTATGCATGGGGTGCCTG
AATCTGAGACGAATGCTGAGGATACTGCTCCAGTGGTGGTCAAAGTAGTC
AAAGACCACCTTAATATTGACATCACACCAGCTGACATCAAGCGGTGCCG
CAGAATGGGACGTTCTTCGCACAAACCCCGACCTATCCTGTTCAAACTTA
AAGATGTGGCTCTCCGAAATAGAGTGTGGCTTGCCAAAACAAAGTTGAAA
GGTTCGGGTATCACTCTCTCCGAATTTTTAACAAAAAGTCGACATAAAGT
CTTTATGGCAGCTAGGGATAAGTTCGGTGTGAGTCAGTGCTGGACGAAGG
AGGGCGTTGTGTTTGTCCTGGACTCAAAGGGATCCCGACACCGTGTTACG
ACTATGGAGGACCTTGGTAAGGTCGAATCGCAGCCTGGTGGTAAACAGCA
GCAGTCATCAGGACCATCGGAGCGGGTTGTTGTTGTTGCACAACCCGTGA
CTGCCTCAGCCACCAGAACGGTCACTTCCAAGGCATCCAAACGTGCAGCG
GCTCGCAAGTAA back to topCoding sequence (CDS) from alignment at scaffold296:257012..257773- >SL2001527-RA ID=SL2001527-RA|Name=SL2001527-RA|organism=Spodoptera littoralis|type=CDS|length=762bp|location=Sequence derived from alignment at scaffold296:257012..257773- (Spodoptera littoralis) ATGGAAGCCCTCACACGCACTGTGTCCGACTTGTGCAGCCAGTTCTACCA ACGCATGGCTGAATTCGAGCAGGAGTTGAAGAGAACCCCAGATGCGGCCA CTGGACTGTCAGCAGACTTTGCTGCTTTTCGCCAGTTTATCATCCAAGCA CTGAGCACACTTCAGGAGCAAATGAAGGTAATGGCACTTTCTATCGATGG CATTGAAATGCGCAGCCGTCATAAAATACTGCTTATGCATGGGGTGCCTG AATCTGAGACGAATGCTGAGGATACTGCTCCAGTGGTGGTCAAAGTAGTC AAAGACCACCTTAATATTGACATCACACCAGCTGACATCAAGCGGTGCCG CAGAATGGGACGTTCTTCGCACAAACCCCGACCTATCCTGTTCAAACTTA AAGATGTGGCTCTCCGAAATAGAGTGTGGCTTGCCAAAACAAAGTTGAAA GGTTCGGGTATCACTCTCTCCGAATTTTTAACAAAAAGTCGACATAAAGT CTTTATGGCAGCTAGGGATAAGTTCGGTGTGAGTCAGTGCTGGACGAAGG AGGGCGTTGTGTTTGTCCTGGACTCAAAGGGATCCCGACACCGTGTTACG ACTATGGAGGACCTTGGTAAGGTCGAATCGCAGCCTGGTGGTAAACAGCA GCAGTCATCAGGACCATCGGAGCGGGTTGTTGTTGTTGCACAACCCGTGA CTGCCTCAGCCACCAGAACGGTCACTTCCAAGGCATCCAAACGTGCAGCG GCTCGCAAGTAA back to top
Synonyms
The feature 'SL2001527-RA' has the following synonyms
Synonym |
augustus_masked-scaffold296-processed-gene-2.16-mRNA-1 |
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