Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| Venturia canescens OGS 1.1 20190131 | 2019-01-31 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g3559 | g3559 | Venturia canescens | gene | scaffold_10895 2..960 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g3559.t1-CDS | g3559.t1-CDS-1 | Venturia canescens | CDS | scaffold_10895 2..960 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g3559.t1-exon | g3559.t1-exon-1 | Venturia canescens | exon | scaffold_10895 2..960 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >g3559.t1 ID=g3559.t1|Name=g3559.t1|organism=Venturia canescens|type=mRNA|length=959bp|location=Sequence derived from alignment at scaffold_10895:2..960+ (Venturia canescens)|Notes=Excludes all bases but those of type(s): exon.
AACCAAACGAAAAAAAGATCGAAGCAGTTGTGCGATTTCCAAAACCGGAA
AACGTTCGACAAATTCAGAGTTTTCTCGGGTTAACCGGATACTTCCGTAA
ATTCGTGCCCGGATATTCTTTAATAGCGCGACCGCTATCGAATCTTTTAA
AATCAAACGTAAAATTCAAGTTTGATGAGGCCGAAAACGACGCTTTCGTG
CGTCTTAAAATGATTTTGACGAGTCAACCGGTTTTAAATCTGTATCGAGT
AGGCGCAGATACAGAACTGCACACCGATGCGTCGAAGTATGGTTATGGTG
CGATATTATTTCAAAGAAATAACGAAGACAAAGCGTTACACCCTGTGTAC
TACGCTAGTGGTAAAACGACAACGGCAGAAGAAAAGTACCCGAGTTATGA
ACTCGAGGTACTCGCGATTGTAAAAGCATTAAAGAAGTTTCGAATTTATT
TGCTTGCGATACCATTTAAGATTGTAACCGACTGTCGCGCTTTCACCCTT
ACTATGAATAAGCGAGATCTTTGTGTACGTGTTGCTAGATGGGCGCTTCA
ATTAGAAGAATTTGTGTATAGTATAGAGCACCGACCGGGTAAAAACATGG
CACACGTTGACGCTCTTAGCCGAAATCCGTTATCCACGTGTTTACTAGTT
GAAGAAGTCAACGAGGGTTTGACGCTGAGATTAAAGAAAGCTCAACAGGA
AAATTCAGAGACGCGAAGGATATTCGAGTTGGCTGAAAAAAATGAGGCCC
GAGGATATTGCATCCGCGGAGGCGTGTTGTACAGAGACGACGAAGGTGAC
CTACGATTTGTGGTTCCGAAAGGAATGCAGACACAAGTAATCAGGATGGC
TCATGAACGAGGTCATTTCTCTGTGAGCAAAACAGAAGCGCTAGTGAAAA
AAGATTATTGGATGCCAAATCTTCGTGCAAAAGTCGAAAAGGTGATCAGA
AAATGTGTC back to topprotein sequence of g3559.t1 >g3559.t1-PA ID=g3559.t1-PA|Name=g3559.t1|organism=Venturia canescens|type=polypeptide|length=319bp
PNEKKIEAVVRFPKPENVRQIQSFLGLTGYFRKFVPGYSLIARPLSNLLK
SNVKFKFDEAENDAFVRLKMILTSQPVLNLYRVGADTELHTDASKYGYGA
ILFQRNNEDKALHPVYYASGKTTTAEEKYPSYELEVLAIVKALKKFRIYL
LAIPFKIVTDCRAFTLTMNKRDLCVRVARWALQLEEFVYSIEHRPGKNMA
HVDALSRNPLSTCLLVEEVNEGLTLRLKKAQQENSETRRIFELAEKNEAR
GYCIRGGVLYRDDEGDLRFVVPKGMQTQVIRMAHERGHFSVSKTEALVKK
DYWMPNLRAKVEKVIRKCV back to topmRNA from alignment at scaffold_10895:2..960+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >g3559.t1 ID=g3559.t1|Name=g3559.t1|organism=Venturia canescens|type=mRNA|length=959bp|location=Sequence derived from alignment at scaffold_10895:2..960+ (Venturia canescens)
AACCAAACGAAAAAAAGATCGAAGCAGTTGTGCGATTTCCAAAACCGGAA
AACGTTCGACAAATTCAGAGTTTTCTCGGGTTAACCGGATACTTCCGTAA
ATTCGTGCCCGGATATTCTTTAATAGCGCGACCGCTATCGAATCTTTTAA
AATCAAACGTAAAATTCAAGTTTGATGAGGCCGAAAACGACGCTTTCGTG
CGTCTTAAAATGATTTTGACGAGTCAACCGGTTTTAAATCTGTATCGAGT
AGGCGCAGATACAGAACTGCACACCGATGCGTCGAAGTATGGTTATGGTG
CGATATTATTTCAAAGAAATAACGAAGACAAAGCGTTACACCCTGTGTAC
TACGCTAGTGGTAAAACGACAACGGCAGAAGAAAAGTACCCGAGTTATGA
ACTCGAGGTACTCGCGATTGTAAAAGCATTAAAGAAGTTTCGAATTTATT
TGCTTGCGATACCATTTAAGATTGTAACCGACTGTCGCGCTTTCACCCTT
ACTATGAATAAGCGAGATCTTTGTGTACGTGTTGCTAGATGGGCGCTTCA
ATTAGAAGAATTTGTGTATAGTATAGAGCACCGACCGGGTAAAAACATGG
CACACGTTGACGCTCTTAGCCGAAATCCGTTATCCACGTGTTTACTAGTT
GAAGAAGTCAACGAGGGTTTGACGCTGAGATTAAAGAAAGCTCAACAGGA
AAATTCAGAGACGCGAAGGATATTCGAGTTGGCTGAAAAAAATGAGGCCC
GAGGATATTGCATCCGCGGAGGCGTGTTGTACAGAGACGACGAAGGTGAC
CTACGATTTGTGGTTCCGAAAGGAATGCAGACACAAGTAATCAGGATGGC
TCATGAACGAGGTCATTTCTCTGTGAGCAAAACAGAAGCGCTAGTGAAAA
AAGATTATTGGATGCCAAATCTTCGTGCAAAAGTCGAAAAGGTGATCAGA
AAATGTGTC back to topCoding sequence (CDS) from alignment at scaffold_10895:2..960+ >g3559.t1 ID=g3559.t1|Name=g3559.t1|organism=Venturia canescens|type=CDS|length=959bp|location=Sequence derived from alignment at scaffold_10895:2..960+ (Venturia canescens)
AACCAAACGAAAAAAAGATCGAAGCAGTTGTGCGATTTCCAAAACCGGAA
AACGTTCGACAAATTCAGAGTTTTCTCGGGTTAACCGGATACTTCCGTAA
ATTCGTGCCCGGATATTCTTTAATAGCGCGACCGCTATCGAATCTTTTAA
AATCAAACGTAAAATTCAAGTTTGATGAGGCCGAAAACGACGCTTTCGTG
CGTCTTAAAATGATTTTGACGAGTCAACCGGTTTTAAATCTGTATCGAGT
AGGCGCAGATACAGAACTGCACACCGATGCGTCGAAGTATGGTTATGGTG
CGATATTATTTCAAAGAAATAACGAAGACAAAGCGTTACACCCTGTGTAC
TACGCTAGTGGTAAAACGACAACGGCAGAAGAAAAGTACCCGAGTTATGA
ACTCGAGGTACTCGCGATTGTAAAAGCATTAAAGAAGTTTCGAATTTATT
TGCTTGCGATACCATTTAAGATTGTAACCGACTGTCGCGCTTTCACCCTT
ACTATGAATAAGCGAGATCTTTGTGTACGTGTTGCTAGATGGGCGCTTCA
ATTAGAAGAATTTGTGTATAGTATAGAGCACCGACCGGGTAAAAACATGG
CACACGTTGACGCTCTTAGCCGAAATCCGTTATCCACGTGTTTACTAGTT
GAAGAAGTCAACGAGGGTTTGACGCTGAGATTAAAGAAAGCTCAACAGGA
AAATTCAGAGACGCGAAGGATATTCGAGTTGGCTGAAAAAAATGAGGCCC
GAGGATATTGCATCCGCGGAGGCGTGTTGTACAGAGACGACGAAGGTGAC
CTACGATTTGTGGTTCCGAAAGGAATGCAGACACAAGTAATCAGGATGGC
TCATGAACGAGGTCATTTCTCTGTGAGCAAAACAGAAGCGCTAGTGAAAA
AAGATTATTGGATGCCAAATCTTCGTGCAAAAGTCGAAAAGGTGATCAGA
AAATGTGTC back to top
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