Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| Venturia canescens OGS 1.1 20190131 | 2019-01-31 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g7064 | g7064 | Venturia canescens | gene | scaffold_109 239..3234 - |
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g7064.t1-stop_codon | g7064.t1-stop_codon | Venturia canescens | stop_codon | scaffold_109 239..241 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g7064.t1-intron | g7064.t1-intron | Venturia canescens | intron | scaffold_109 1534..3174 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| g7064.t1-start_codon | g7064.t1-start_codon | Venturia canescens | start_codon | scaffold_109 3232..3234 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >g7064.t1 ID=g7064.t1|Name=g7064.t1|organism=Venturia canescens|type=mRNA|length=633bp|location=Sequence derived from alignment at scaffold_109:239..3234- (Venturia canescens)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTGTTAAGTACGTGGACATGTTTTCGGACGAGGGATACGCGTCGGA
TCCACAAAACGTTCAGAGGCTAGCCGAGTACGAGAGATATCTTGGACAAG
AAGCCCGGAATCTTCAGGTGGATAACCCCGAGAGCGGGAACGTTTGTAGC
GCTGCTGTGCTACAGCGTGGGCAGCTCGAGGGTGATCTTCACCGTATTCA
GGAACTGTTCCCCGGTGACAATCTCCGTCTTCACGAACGCGATGTTCTCA
CAACGAAGATGAAGAATCTCATACGAAAAAGGAGCGGTGGCAACACAGGA
AGGCTGACGAGGGTGCTGTCGCAAAAATCTTTAAATGTCACATCATCCTC
ACCGGCGCCGAAATCACCGCCGCGAACATTTCTCCTCGAGACACCGGTTC
AATTTACGACGGGAATGCAATCGCAAGAAAGACATTTGTTTCTCTTCTCT
GATCTGCTGCTCATCGCGAAAGCTCGAATCGGTGGTAATTTCAAGCTTAA
GCAATCGGTGAAAATGAGCGAGCTCTGGTTGACCGCCGGACACATCGAGG
ATGTTGCGGAAACGAATAAATCCCAAGAAACGAGCTTCGTTCTAGGTTGG
CCAACGACCAATGTTGTCGCAACGTTCATGTAA back to topprotein sequence of g7064.t1 >g7064.t1-PA ID=g7064.t1-PA|Name=g7064.t1|organism=Venturia canescens|type=polypeptide|length=210bp
MFVKYVDMFSDEGYASDPQNVQRLAEYERYLGQEARNLQVDNPESGNVCS
AAVLQRGQLEGDLHRIQELFPGDNLRLHERDVLTTKMKNLIRKRSGGNTG
RLTRVLSQKSLNVTSSSPAPKSPPRTFLLETPVQFTTGMQSQERHLFLFS
DLLLIAKARIGGNFKLKQSVKMSELWLTAGHIEDVAETNKSQETSFVLGW
PTTNVVATFM back to topmRNA from alignment at scaffold_109:239..3234- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >g7064.t1 ID=g7064.t1|Name=g7064.t1|organism=Venturia canescens|type=mRNA|length=2996bp|location=Sequence derived from alignment at scaffold_109:239..3234- (Venturia canescens)
ATGTTTGTTAAGTACGTGGACATGTTTTCGGACGAGGGATACGCGTCGGA
TCCACAAAACGTAGGTATACTAAAATTCCAACATTTTTTCACACTCCCAC
CTTTAGGATCAATTCCGAGAACACTTTTTCACGAGCATTCCGGTACATAA
CCGACCCTGAATCTCATCGTTTTTCAACGAGAAAAGTTTTTCAGCGTTCT
GAAAAAAACTTCTCGAGACTAATGATGGAGAAACGATTTTTTGAAGCAGC
CTGTAATTGCTTCGCTCTCCAGTGTCCTTCCAGCAATAAAATCGCGTTTC
TTCACTCGTCTTGCTCCGGACGGAGCAATTAATAAAAGCGTTAATGTACT
CGAAAATGGCGCACAGGCTGCTCGATCCAGTGATATTTACGCATGTTTGA
GGCTTGCGTCATAGAAATATCGATCACAAGCACTCAATTTACATTTTGTA
TCGAATGGCGATGAATCAAGCGTGTTTGTCGAGCGGTAGCTGAAAAAATG
GTTTTCGTACGTAGCCCGTGAGTGGGAGACCCCCGAAAGATCGCGATCGC
GAAGTTTATTTTTTCATCTCTCGTTCGGCGGTCCATCCGTCAGGATAATC
AGGTCGAGCTGTCAGAAAAAAACGCCGATAAATCGCGCTCACAATAAGAT
CAACGTGTACATGTGCGTTCGATAATCCATCGATTTTCTACCGTAAGCTT
TTTGAATATTCAATCGACCGCTTGGAGGAAACTGTTGCGTCAACTTTATG
TGTTGGCGTTCCAGTTTTGAGGATCAACGAAATCACCGGATTTTATTCAA
AACTCCGATAGAATTACCTCCGATAGGATTATGTACAGTTAACACTAAAA
TTCTACGAAACGCTTATGGAAACGAGGAATAGTCGGGGCCCCCTCGCTCA
GCAAAGCTACAAATCTGTTGGTAAACATTTGACGCAATCGGCTGTGACCG
AAAAGCCGGAAATTGCGCGCGCGACCTGTCAAAATAAATGGTTGGACGAA
AAAAAAAATGGGAAAAATGATGATTTTGTTTTGTTTTCGTATTCCAAAGT
TTGCTTTCACGAGTCGTCGGAGCTCCCGAAGAGTGGTGATCGATTCGATA
GGCGCTAACGATATGAAATATTTATGAAAACTTGCCAGATGTTTCGACAC
GAATGAGAGTCGGTGAGTCTGGAAGTCTCCGGTGATTTTGTACCCTCGTG
TATTATGTAAATCGCTCCTCGCACTTATTCCGAAGATTCTCTTCCCGAAA
ATGAGCGTCTTGCGCTCGCTGTACGCATGCGCGTTCGTCACAAAGACTTT
CGGATTAAATATTGAGATTTTTTTATCCCCCTGTGACAGCGATCGCTGAT
TGCAGCTCGAGTTACTTCGGTGCTTCGTAATGCACTGCGCGTGGCTTTAT
GCGAATGCAGTTGATTGGAAAGAAATTCGCACACTTTCCGCGAATACATT
ACACCGAAATGTGTGTGTGTGTGTATGCGCTTGTATTTATGAGCGAAGAC
AGGAAATGACTGACACAAAATTGCAGTTCGTTAACCCTCGATAGCAGGGA
AAAGAAAGTTTGTGCATTCGTGCCATTTCGCCTGGAAGATTTAATGAGCA
TCCTCTTCGCCTCCGATTTCATTGGGAACGACGATTCTTTATTCTCATTT
TCTCCAATGATCTTCCCATAAATAACTACTGTTATATTTTTTGGCTTGCA
GGTTCAGAGGCTAGCCGAGTACGAGAGATATCTTGGACAAGAAGCCCGGA
ATCTTCAGGTGGATAACCCCGAGAGCGGGAACGTTTGTAGCGCTGCTGTG
CTACAGCGTGGGCAGCTCGAGGGTGATCTTCACCGTATTCAGGAACTGTT
CCCCGGTGACAATCTCCGTCTTCACGAACGCGATGTTCTCACAACGGTAA
ATAATTTCGATGTTGAGAAACTTTTTCGTCGATACTTTCGTAAACTTTCG
TTATTTCGATCCACGATTTTTCTCAGTTTCAAATCGATCGAAAAATTCGA
CGAATGGAAATGAGAGTGATCGAAACTGGAGGAAAAGTTTATGAAACATG
ATATCGACAGGACGAATTGAGGGAAAGAATTCAAAGTTGTTCGCGATGGA
TCGTCGATCGTGAATGTTTCAATAAAATATGTTTCCGAGTCGCAGACTAT
TCGAAGATTTGTCAAAACGCTTGCAACCGTTCTGGCATAAATGAGAATTC
GTTTTATTAATATCGATTGTGCGGTGCCACAATCGTGCGTGTTCCAGAAG
ATGAAGAATCTCATACGAAAAAGGAGCGGTGGCAACACAGGAAGGCTGAC
GAGGGTGCTGTCGCAAAAATCTTTAAATGTCACATCATCCTCACCGGCGC
CGAAATCACCGCCGCGAACATTTCTCCTCGAGACACCGGTTCAATTTACG
ACGGTGAGTAGTCGTAAATTCTCGAATCCTGATGCCACAAGTCAAAAAAC
GAATGATAATTATCCAAATTTTCGTCCTTTAAATCCGAGGCGTTTCTCCA
CTTTTCTGAAATTTATTTGACTCTGAAGAATATTCGCGATAGTAATTATC
GCCGGGAACGTCCGACGTGAATTTTTGTTCGTTTATTGCCGAAAATATTC
TCGATTCAGCTTCTGTGTGCTGAGCCAGAAAACTTTGCTTTTTATGCACA
TTTTTTATTCCTGAAAACAAGAATTTCTTTTTGGCAGTGAAAGAATAAAT
TTCACCGCTGGAAATTCGTTCGAGCCCCCATCGATTTGGCTCTCTCCGTA
AAGTTCGATTTTTCGTTTTCACAGGGAATGCAATCGCAAGAAAGACATTT
GTTTCTCTTCTCTGATCTGCTGCTCATCGCGAAAGCTCGAATCGGTGGTA
ATTTCAAGCTTAAGCAATCGGTGAAAATGAGCGAGCTCTGGTTGACCGCC
GGACACATCGAGGATGTTGCGGAAACGAATAAATCCCAAGAAACGAGCTT
CGTTCTAGGTTGGCCAACGACCAATGTTGTCGCAACGTTCATGTAA back to topCoding sequence (CDS) from alignment at scaffold_109:239..3234- >g7064.t1 ID=g7064.t1|Name=g7064.t1|organism=Venturia canescens|type=CDS|length=633bp|location=Sequence derived from alignment at scaffold_109:239..3234- (Venturia canescens)
ATGTTTGTTAAGTACGTGGACATGTTTTCGGACGAGGGATACGCGTCGGA
TCCACAAAACGTTCAGAGGCTAGCCGAGTACGAGAGATATCTTGGACAAG
AAGCCCGGAATCTTCAGGTGGATAACCCCGAGAGCGGGAACGTTTGTAGC
GCTGCTGTGCTACAGCGTGGGCAGCTCGAGGGTGATCTTCACCGTATTCA
GGAACTGTTCCCCGGTGACAATCTCCGTCTTCACGAACGCGATGTTCTCA
CAACGAAGATGAAGAATCTCATACGAAAAAGGAGCGGTGGCAACACAGGA
AGGCTGACGAGGGTGCTGTCGCAAAAATCTTTAAATGTCACATCATCCTC
ACCGGCGCCGAAATCACCGCCGCGAACATTTCTCCTCGAGACACCGGTTC
AATTTACGACGGGAATGCAATCGCAAGAAAGACATTTGTTTCTCTTCTCT
GATCTGCTGCTCATCGCGAAAGCTCGAATCGGTGGTAATTTCAAGCTTAA
GCAATCGGTGAAAATGAGCGAGCTCTGGTTGACCGCCGGACACATCGAGG
ATGTTGCGGAAACGAATAAATCCCAAGAAACGAGCTTCGTTCTAGGTTGG
CCAACGACCAATGTTGTCGCAACGTTCATGTAA back to top
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