Analysis
Name |
Program | Source |
|---|---|---|
| Annotation v1.0 of Aphis glycines, Biotype 4 (Ag_bt4) | MAKER | Wenger et al, 2017 |
| Assembly v1.0 of Aphis glycines, Biotype 4 (Ag_bt4) | CLC Bio, Velvet, Minimus2, CLC Genome Finishing Module, SSPACE-LongRead software | Wenger et al, 2017 |
| Blast2GO on Annotation v1.0 of Aphis glycines, Biotype 4 (Ag_bt4) | Blast2GO | BIPAA |
| Blast2GO on OGS6.0 | Blast2GO | BIPAA |
| Blastp: Annotation v1.0 of Aphis glycines, Biotype 4 (Ag_bt4) vs NR | Diamond | BIPAA |
| Blastp: OGS6.0 vs NR | Blastp | BIPAA |
| InterProScan on Annotation v1.0 of Aphis glycines, Biotype 4 (Ag_bt4) | InterProScan | BIPAA |
| InterProScan on OGS6.0 | InterProScan | BIPAA |
| Whole Genome Assembly (v6.0) and Annotation OGS6.0 of Aphis glycines, Biotype 1 (Ag_bt1) | Performed by Rosanna Giordano's Lab | Rosanna Giordano's Lab |