Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.48 |
QI | 0|0|0|1|0|0|2|0|107 |
eAED | 0.48 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
AG6000475 | AG6000475 | Aphis glycines Ag_bt1 | gene | SBAphidCtg1001 4253701..4254087 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AG6000475-RA:cds | AG6000475-RA:cds | Aphis glycines Ag_bt1 | CDS | SBAphidCtg1001 4254010..4254087 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AG6000475-RA:1 | AG6000475-RA:1 | Aphis glycines Ag_bt1 | exon | SBAphidCtg1001 4253701..4253946 - |
AG6000475-RA:2 | AG6000475-RA:2 | Aphis glycines Ag_bt1 | exon | SBAphidCtg1001 4254010..4254087 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >AG6000475-RA ID=AG6000475-RA|Name=AG6000475-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=324bp|location=Sequence derived from alignment at SBAphidCtg1001:4253701..4254087- (Aphis glycines Ag_bt1)|Notes=Excludes all bases but those of type(s): exon.
ATGTTATTTGTACGTTGTACTCGACCGGCCGTCGAAAACGAAACTGATAC CGAAGTGCTCGTTGTTATTGTTATTATCACGGAATTGATATGTTCGATCG ATTGCCGTAAATCGTACGCACAAAACGTTGAGTTGAATCGCGACAAAATG GCGTTAGGGAAGTCTTATCGTTTGTTCTGTCCCGGGTGTGTACCGAGTAG TACACTACACTATAGTAAAAATTACAAGAGTACAACAACTACTGAACTAC GCACCGGGGGTGTAAGAAAGATCCTCCGTGGGCTGTGGCAGCCTGACGGT TGTATACTGTGTCTACCTATATAG back to topprotein sequence of AG6000475-RA >AG6000475-PA ID=AG6000475-PA|Name=AG6000475-RA|organism=Aphis glycines Ag_bt1|type=polypeptide|length=107bp
MLFVRCTRPAVENETDTEVLVVIVIITELICSIDCRKSYAQNVELNRDKM ALGKSYRLFCPGCVPSSTLHYSKNYKSTTTTELRTGGVRKILRGLWQPDG CILCLPI back to topmRNA from alignment at SBAphidCtg1001:4253701..4254087- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >AG6000475-RA ID=AG6000475-RA|Name=AG6000475-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=387bp|location=Sequence derived from alignment at SBAphidCtg1001:4253701..4254087- (Aphis glycines Ag_bt1) ATGTTATTTGTACGTTGTACTCGACCGGCCGTCGAAAACGAAACTGATAC
CGAAGTGCTCGTTGTTATTGTTATTATCGTTAGTCGTCAATTAACAAGTT
AATCTTAAAACTAATATTTCTCCCTGTTGTCACTTCGTCAGACGGAATTG
ATATGTTCGATCGATTGCCGTAAATCGTACGCACAAAACGTTGAGTTGAA
TCGCGACAAAATGGCGTTAGGGAAGTCTTATCGTTTGTTCTGTCCCGGGT
GTGTACCGAGTAGTACACTACACTATAGTAAAAATTACAAGAGTACAACA
ACTACTGAACTACGCACCGGGGGTGTAAGAAAGATCCTCCGTGGGCTGTG
GCAGCCTGACGGTTGTATACTGTGTCTACCTATATAG back to topCoding sequence (CDS) from alignment at SBAphidCtg1001:4253701..4254087- >AG6000475-RA ID=AG6000475-RA|Name=AG6000475-RA|organism=Aphis glycines Ag_bt1|type=CDS|length=324bp|location=Sequence derived from alignment at SBAphidCtg1001:4253701..4254087- (Aphis glycines Ag_bt1) ATGTTATTTGTACGTTGTACTCGACCGGCCGTCGAAAACGAAACTGATAC CGAAGTGCTCGTTGTTATTGTTATTATCACGGAATTGATATGTTCGATCG ATTGCCGTAAATCGTACGCACAAAACGTTGAGTTGAATCGCGACAAAATG GCGTTAGGGAAGTCTTATCGTTTGTTCTGTCCCGGGTGTGTACCGAGTAG TACACTACACTATAGTAAAAATTACAAGAGTACAACAACTACTGAACTAC GCACCGGGGGTGTAAGAAAGATCCTCCGTGGGCTGTGGCAGCCTGACGGT TGTATACTGTGTCTACCTATATAG back to top
Synonyms
The feature 'AG6000475-RA' has the following synonyms
Synonym |
maker-SBAphidCtg1001-snap-gene-43.358-mRNA-1 |
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