Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.48 |
QI | 0|-1|0|1|-1|1|1|0|101 |
eAED | 1.00 |
merge warning | 1 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
AG6000632 | AG6000632 | Aphis glycines Ag_bt1 | gene | SBAphidCtg1001 4855927..4856232 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AG6000632-RA:1 | AG6000632-RA:1 | Aphis glycines Ag_bt1 | exon | SBAphidCtg1001 4855927..4856232 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AG6000632-RA:cds | AG6000632-RA:cds | Aphis glycines Ag_bt1 | CDS | SBAphidCtg1001 4855927..4856232 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >AG6000632-RA ID=AG6000632-RA|Name=AG6000632-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=306bp|location=Sequence derived from alignment at SBAphidCtg1001:4855927..4856232+ (Aphis glycines Ag_bt1)|Notes=Excludes all bases but those of type(s): exon.
ATGACCAGTGAAGTCCTGAGTGTTCTTGTCCAAACCAAATTTGGTATACA ACTGTTGTGCAGACATACGCTGTGGGTCGACATCCTTCCATGTTTTGGGG TCGTTCTCCTGGAAGTCTTGCACAAATATCAGGAAATTTCTGAATCGCCT CTTCTCGAATATTCCCATCAGATCCGACGACAGTGCTTCCTTTTGGTCAA CAGGTACCTTGTAGATTTTTCCACCCTTGTACACGTAGCTGCCCTCGACC GACTTGAACTCCAAGTAGCGCGTAACGCCTGTATGTATAAGCAGCTTGAC CAGTAA back to topprotein sequence of AG6000632-RA >AG6000632-PA ID=AG6000632-PA|Name=AG6000632-RA|organism=Aphis glycines Ag_bt1|type=polypeptide|length=101bp
MTSEVLSVLVQTKFGIQLLCRHTLWVDILPCFGVVLLEVLHKYQEISESP LLEYSHQIRRQCFLLVNRYLVDFSTLVHVAALDRLELQVARNACMYKQLD Q back to topmRNA from alignment at SBAphidCtg1001:4855927..4856232+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >AG6000632-RA ID=AG6000632-RA|Name=AG6000632-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=306bp|location=Sequence derived from alignment at SBAphidCtg1001:4855927..4856232+ (Aphis glycines Ag_bt1) ATGACCAGTGAAGTCCTGAGTGTTCTTGTCCAAACCAAATTTGGTATACA
ACTGTTGTGCAGACATACGCTGTGGGTCGACATCCTTCCATGTTTTGGGG
TCGTTCTCCTGGAAGTCTTGCACAAATATCAGGAAATTTCTGAATCGCCT
CTTCTCGAATATTCCCATCAGATCCGACGACAGTGCTTCCTTTTGGTCAA
CAGGTACCTTGTAGATTTTTCCACCCTTGTACACGTAGCTGCCCTCGACC
GACTTGAACTCCAAGTAGCGCGTAACGCCTGTATGTATAAGCAGCTTGAC
CAGTAA back to topCoding sequence (CDS) from alignment at SBAphidCtg1001:4855927..4856232+ >AG6000632-RA ID=AG6000632-RA|Name=AG6000632-RA|organism=Aphis glycines Ag_bt1|type=CDS|length=306bp|location=Sequence derived from alignment at SBAphidCtg1001:4855927..4856232+ (Aphis glycines Ag_bt1) ATGACCAGTGAAGTCCTGAGTGTTCTTGTCCAAACCAAATTTGGTATACA ACTGTTGTGCAGACATACGCTGTGGGTCGACATCCTTCCATGTTTTGGGG TCGTTCTCCTGGAAGTCTTGCACAAATATCAGGAAATTTCTGAATCGCCT CTTCTCGAATATTCCCATCAGATCCGACGACAGTGCTTCCTTTTGGTCAA CAGGTACCTTGTAGATTTTTCCACCCTTGTACACGTAGCTGCCCTCGACC GACTTGAACTCCAAGTAGCGCGTAACGCCTGTATGTATAAGCAGCTTGAC CAGTAA back to top
Synonyms
The feature 'AG6000632-RA' has the following synonyms
Synonym |
snap_masked-SBAphidCtg1001-processed-gene-48.111-mRNA-1 |
|