Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.47 |
QI | 0|0|0|1|0|0|4|0|78 |
eAED | 0.62 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
AG6000668 | AG6000668 | Aphis glycines Ag_bt1 | gene | SBAphidCtg1001 4970085..4970601 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
AG6000668-RA:cds | AG6000668-RA:cds | Aphis glycines Ag_bt1 | CDS | SBAphidCtg1001 4970085..4970120 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >AG6000668-RA ID=AG6000668-RA|Name=AG6000668-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=237bp|location=Sequence derived from alignment at SBAphidCtg1001:4970085..4970601+ (Aphis glycines Ag_bt1)|Notes=Excludes all bases but those of type(s): exon.
ATGATTATAATATCAAAAATTATTTTATTATTGCAACTATCCTACACGCT TCACCAAATCCTACAACTATTGGCGTTGGAACAGTTCCACTCCTTAAACC TCGTTCTTGACCACCTCCACTCTGAAGAGGTTCTAAACATCAATATTTTG ATCATTAACATCGACAGTAATCTTGCCAACCGCTTGAGCTGCATCACTGT CAGTTTATTTTTTGATTATTCTCACCAATTTCCTTAA back to topprotein sequence of AG6000668-RA >AG6000668-PA ID=AG6000668-PA|Name=AG6000668-RA|organism=Aphis glycines Ag_bt1|type=polypeptide|length=78bp
MIIISKIILLLQLSYTLHQILQLLALEQFHSLNLVLDHLHSEEVLNINIL IINIDSNLANRLSCITVSLFFDYSHQFP back to topmRNA from alignment at SBAphidCtg1001:4970085..4970601+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >AG6000668-RA ID=AG6000668-RA|Name=AG6000668-RA|organism=Aphis glycines Ag_bt1|type=mRNA|length=517bp|location=Sequence derived from alignment at SBAphidCtg1001:4970085..4970601+ (Aphis glycines Ag_bt1) ATGATTATAATATCAAAAATTATTTTATTATTGCAAGTTAATAAATAAAT
AAATTGTATACAACTATTCTACTAACCTCCATTTCTTGTTTAGCTATCCT
ACACGCTTCACCAAATCCTACAACTATTGGCGTTGGAACAGTTCCACTCC
TTAAACCTCGTTCTTGACCACCTCCACTCTGAAGAGGTTCTAAACGTACT
CTAGGTTTACGCCGAACAAATAATGCTCCAATACCTTTTAATAAGAAAAG
ATAATAGTATTGATAGTATTATTTATAAAACACAAAAACTTATTTTCAAT
TTTATACCTTTTGGTCCATATAACTTATGTCCACTTATAGACATCAGATC
AATATTTTGATCATTAACATCGACAGTAATCTTGCCAACCGCTTGAGCTG
CATCAGTATGGAAAAATACTTTTTTTGACTTGCATAATTTACCTACAAAA
ATAATTAGATAATAAGTTTACTTTAGCTGTCAGTTTATTTTTTGATTATT
CTCACCAATTTCCTTAA back to topCoding sequence (CDS) from alignment at SBAphidCtg1001:4970085..4970601+ >AG6000668-RA ID=AG6000668-RA|Name=AG6000668-RA|organism=Aphis glycines Ag_bt1|type=CDS|length=237bp|location=Sequence derived from alignment at SBAphidCtg1001:4970085..4970601+ (Aphis glycines Ag_bt1) ATGATTATAATATCAAAAATTATTTTATTATTGCAACTATCCTACACGCT TCACCAAATCCTACAACTATTGGCGTTGGAACAGTTCCACTCCTTAAACC TCGTTCTTGACCACCTCCACTCTGAAGAGGTTCTAAACATCAATATTTTG ATCATTAACATCGACAGTAATCTTGCCAACCGCTTGAGCTGCATCACTGT CAGTTTATTTTTTGATTATTCTCACCAATTTCCTTAA back to top
Synonyms
The feature 'AG6000668-RA' has the following synonyms
Synonym |
maker-SBAphidCtg1001-snap-gene-49.60-mRNA-1 |
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