Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.01 |
| QI | 0|1|0.5|1|1|1|2|60|243 |
| eAED | 0.01 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis009032 | Cotesia_vestalis009032 | Cotesia vestalis | gene | scaffold_5118 6386..7275 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis009032-RA:exon:4503 | Cotesia_vestalis009032-RA:exon:4503 | Cotesia vestalis | exon | scaffold_5118 6386..6471 + |
| Cotesia_vestalis009032-RA:exon:4504 | Cotesia_vestalis009032-RA:exon:4504 | Cotesia vestalis | exon | scaffold_5118 6570..7275 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis009032-RA:cds | Cotesia_vestalis009032-RA:cds | Cotesia vestalis | CDS | scaffold_5118 6386..6471 + |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis009032-RA:three_prime_utr | Cotesia_vestalis009032-RA:three_prime_utr | Cotesia vestalis | three_prime_UTR | scaffold_5118 7216..7275 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_vestalis009032-RA ID=Cotesia_vestalis009032-RA|Name=Cotesia_vestalis009032-RA|organism=Cotesia vestalis|type=mRNA|length=792bp|location=Sequence derived from alignment at scaffold_5118:6386..7275+ (Cotesia vestalis)|Notes=Excludes all bases but those of type(s): exon.
TGCGAAAATCAAGTAGGATCTAAAATTCAATTTCCGAAAGATTTCAATGG
CCAAATACCGGATACAAAATTTCATTCTCAAACAAGATTTGAGTCAAGTA
ACCAAAAGCTTCAGGTAAAATCACCCGGAATTTTATCAAAATTTGACAGT
AAGTGCAATTGCCGAGAAAACCCGTACATAGTGTTTTTAAGTGTCGACAA
TATGAAGAAATTCCAGCGCCGCAGCTCCTCTAACGGCCGAATAGTAGAGC
AGCCATTTTATGTTGACGAGCCCGATTGGGTGATGCTGAGCGAGTCGAAC
ACTAATTTAATGTCGAATGACAACAAATTGATAAAGCAGGCTGATCAAGA
TCCGTTTTACCTAGCCCGCGGTAGAAAATCAACTATGACGATGAATTTTC
CGTTTAGTAACGAAAAGAAACGCTCGTTCAATTTAAGAGACAGGCAAAAG
CGTTCGGACATTTCGGATTTATTACACGAGCCATTTTTTATATCACGTGG
TAAAAAAAGAAGTTATAATGATTATTATTATCACAGAGGTGACACTCGTG
TAAATGAAAATAATAGAGGGATTTATGTGTATGATAAAAGAAATGAAGAC
AGTGATAATAATGGTTATAGTTATAAATTGTTGGAGGATAATGACGATAC
TGATGGGGCATCACGTGATCGCAGAGATTTTTTTGATCAATTGCTCCGAG
AAAACGATCCTTTTTACGTCACTCGAGGTTAGAGCTTCTCCAATATTTAG
AAAAAAAATCAAGAATATGTAATCATTTTTCAATTTATTTAA back to topprotein sequence of Cotesia_vestalis009032-RA >Cotesia_vestalis009032-PA ID=Cotesia_vestalis009032-PA|Name=Cotesia_vestalis009032-RA|organism=Cotesia vestalis|type=polypeptide|length=244bp
CENQVGSKIQFPKDFNGQIPDTKFHSQTRFESSNQKLQVKSPGILSKFDS
KCNCRENPYIVFLSVDNMKKFQRRSSSNGRIVEQPFYVDEPDWVMLSESN
TNLMSNDNKLIKQADQDPFYLARGRKSTMTMNFPFSNEKKRSFNLRDRQK
RSDISDLLHEPFFISRGKKRSYNDYYYHRGDTRVNENNRGIYVYDKRNED
SDNNGYSYKLLEDNDDTDGASRDRRDFFDQLLRENDPFYVTRG. back to topmRNA from alignment at scaffold_5118:6386..7275+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_vestalis009032-RA ID=Cotesia_vestalis009032-RA|Name=Cotesia_vestalis009032-RA|organism=Cotesia vestalis|type=mRNA|length=890bp|location=Sequence derived from alignment at scaffold_5118:6386..7275+ (Cotesia vestalis)
TGCGAAAATCAAGTAGGATCTAAAATTCAATTTCCGAAAGATTTCAATGG
CCAAATACCGGATACAAAATTTCATTCTCAAACAAGGTAAGAAAAAAAAA
TTTTTTTTTTTTGGATCAAAAAAAAAAAAATTTTTTTTTGATTTTTTAAA
AATGAAAAAAAAAAAAAAATTTTTTTTTTTCTAGATTTGAGTCAAGTAAC
CAAAAGCTTCAGGTAAAATCACCCGGAATTTTATCAAAATTTGACAGTAA
GTGCAATTGCCGAGAAAACCCGTACATAGTGTTTTTAAGTGTCGACAATA
TGAAGAAATTCCAGCGCCGCAGCTCCTCTAACGGCCGAATAGTAGAGCAG
CCATTTTATGTTGACGAGCCCGATTGGGTGATGCTGAGCGAGTCGAACAC
TAATTTAATGTCGAATGACAACAAATTGATAAAGCAGGCTGATCAAGATC
CGTTTTACCTAGCCCGCGGTAGAAAATCAACTATGACGATGAATTTTCCG
TTTAGTAACGAAAAGAAACGCTCGTTCAATTTAAGAGACAGGCAAAAGCG
TTCGGACATTTCGGATTTATTACACGAGCCATTTTTTATATCACGTGGTA
AAAAAAGAAGTTATAATGATTATTATTATCACAGAGGTGACACTCGTGTA
AATGAAAATAATAGAGGGATTTATGTGTATGATAAAAGAAATGAAGACAG
TGATAATAATGGTTATAGTTATAAATTGTTGGAGGATAATGACGATACTG
ATGGGGCATCACGTGATCGCAGAGATTTTTTTGATCAATTGCTCCGAGAA
AACGATCCTTTTTACGTCACTCGAGGTTAGAGCTTCTCCAATATTTAGAA
AAAAAATCAAGAATATGTAATCATTTTTCAATTTATTTAA back to topCoding sequence (CDS) from alignment at scaffold_5118:6386..7275+ >Cotesia_vestalis009032-RA ID=Cotesia_vestalis009032-RA|Name=Cotesia_vestalis009032-RA|organism=Cotesia vestalis|type=CDS|length=732bp|location=Sequence derived from alignment at scaffold_5118:6386..7275+ (Cotesia vestalis)
TGCGAAAATCAAGTAGGATCTAAAATTCAATTTCCGAAAGATTTCAATGG
CCAAATACCGGATACAAAATTTCATTCTCAAACAAGATTTGAGTCAAGTA
ACCAAAAGCTTCAGGTAAAATCACCCGGAATTTTATCAAAATTTGACAGT
AAGTGCAATTGCCGAGAAAACCCGTACATAGTGTTTTTAAGTGTCGACAA
TATGAAGAAATTCCAGCGCCGCAGCTCCTCTAACGGCCGAATAGTAGAGC
AGCCATTTTATGTTGACGAGCCCGATTGGGTGATGCTGAGCGAGTCGAAC
ACTAATTTAATGTCGAATGACAACAAATTGATAAAGCAGGCTGATCAAGA
TCCGTTTTACCTAGCCCGCGGTAGAAAATCAACTATGACGATGAATTTTC
CGTTTAGTAACGAAAAGAAACGCTCGTTCAATTTAAGAGACAGGCAAAAG
CGTTCGGACATTTCGGATTTATTACACGAGCCATTTTTTATATCACGTGG
TAAAAAAAGAAGTTATAATGATTATTATTATCACAGAGGTGACACTCGTG
TAAATGAAAATAATAGAGGGATTTATGTGTATGATAAAAGAAATGAAGAC
AGTGATAATAATGGTTATAGTTATAAATTGTTGGAGGATAATGACGATAC
TGATGGGGCATCACGTGATCGCAGAGATTTTTTTGATCAATTGCTCCGAG
AAAACGATCCTTTTTACGTCACTCGAGGTTAG back to top
Synonyms
The feature 'Cotesia_vestalis009032-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold_5118-augustus-gene-0.9-mRNA-1 |
|