Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.55 |
| QI | 0|0|0|0.5|1|1|2|0|181 |
| eAED | 1.00 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis012490 | Cotesia_vestalis012490 | Cotesia vestalis | gene | scaffold_7323 3309..3927 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis012490-RA:exon:5171 | Cotesia_vestalis012490-RA:exon:5171 | Cotesia vestalis | exon | scaffold_7323 3309..3376 + |
| Cotesia_vestalis012490-RA:exon:5172 | Cotesia_vestalis012490-RA:exon:5172 | Cotesia vestalis | exon | scaffold_7323 3450..3927 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_vestalis012490-RA:cds | Cotesia_vestalis012490-RA:cds | Cotesia vestalis | CDS | scaffold_7323 3309..3376 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_vestalis012490-RA ID=Cotesia_vestalis012490-RA|Name=Cotesia_vestalis012490-RA|organism=Cotesia vestalis|type=mRNA|length=546bp|location=Sequence derived from alignment at scaffold_7323:3309..3927+ (Cotesia vestalis)|Notes=Excludes all bases but those of type(s): exon.
ATGCCTCATCACAATAGAAAAAATTTTATGGAAGACATGCAACTTATTAT
ACATAAAATGGAGAGCTTAAAAATAGAACCAGAAGAATGTAATGTATCGT
GTCCGCCATTTGGGTGTCCTGAAGAACCTTGTCCAGGACAATTCATGAAT
ACTAAAGTATGCGGTATCATTGACATAAAGGTGTCACAAAATTCATCAAA
ATACTGTTCGGATAAAAATAAAAATTTGTCTTTGATCTCTACGTGTCAAG
TACCATCGACAAAACCAAGATGTGTACAGCCTGAATCTCGAGTTTTACCC
AACACTCAATCTTTGGTTGAAATTTATTATCCGCCAGTTCATACTTTGAA
TAGCTCTTTTATCCAAAATCGTCAACAATATCGTTCAAAGTCTACTCCTT
TGAACTATTTACATCAGCACCATATATTTCAGTCGTCTCATTTAAATTCC
ATAAGCGAGTCGCATAAAAATCAAAATTCTATGCCGCCTACTCTTAAGCA
AAAATCATGCGCACAATCTTGCATAGTTTCTATTCCATTCCGGTAA back to topprotein sequence of Cotesia_vestalis012490-RA >Cotesia_vestalis012490-PA ID=Cotesia_vestalis012490-PA|Name=Cotesia_vestalis012490-RA|organism=Cotesia vestalis|type=polypeptide|length=182bp
MPHHNRKNFMEDMQLIIHKMESLKIEPEECNVSCPPFGCPEEPCPGQFMN
TKVCGIIDIKVSQNSSKYCSDKNKNLSLISTCQVPSTKPRCVQPESRVLP
NTQSLVEIYYPPVHTLNSSFIQNRQQYRSKSTPLNYLHQHHIFQSSHLNS
ISESHKNQNSMPPTLKQKSCAQSCIVSIPFR. back to topmRNA from alignment at scaffold_7323:3309..3927+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_vestalis012490-RA ID=Cotesia_vestalis012490-RA|Name=Cotesia_vestalis012490-RA|organism=Cotesia vestalis|type=mRNA|length=619bp|location=Sequence derived from alignment at scaffold_7323:3309..3927+ (Cotesia vestalis)
ATGCCTCATCACAATAGAAAAAATTTTATGGAAGACATGCAACTTATTAT
ACATAAAATGGAGAGCTTGTAAGTGTACTTATTGATACTTTGTTATTTGA
CAAAAAATAAAATCAAAATAACCAAAAATTTATATGTGCAGAAAAATAGA
ACCAGAAGAATGTAATGTATCGTGTCCGCCATTTGGGTGTCCTGAAGAAC
CTTGTCCAGGACAATTCATGAATACTAAAGTATGCGGTATCATTGACATA
AAGGTGTCACAAAATTCATCAAAATACTGTTCGGATAAAAATAAAAATTT
GTCTTTGATCTCTACGTGTCAAGTACCATCGACAAAACCAAGATGTGTAC
AGCCTGAATCTCGAGTTTTACCCAACACTCAATCTTTGGTTGAAATTTAT
TATCCGCCAGTTCATACTTTGAATAGCTCTTTTATCCAAAATCGTCAACA
ATATCGTTCAAAGTCTACTCCTTTGAACTATTTACATCAGCACCATATAT
TTCAGTCGTCTCATTTAAATTCCATAAGCGAGTCGCATAAAAATCAAAAT
TCTATGCCGCCTACTCTTAAGCAAAAATCATGCGCACAATCTTGCATAGT
TTCTATTCCATTCCGGTAA back to topCoding sequence (CDS) from alignment at scaffold_7323:3309..3927+ >Cotesia_vestalis012490-RA ID=Cotesia_vestalis012490-RA|Name=Cotesia_vestalis012490-RA|organism=Cotesia vestalis|type=CDS|length=546bp|location=Sequence derived from alignment at scaffold_7323:3309..3927+ (Cotesia vestalis)
ATGCCTCATCACAATAGAAAAAATTTTATGGAAGACATGCAACTTATTAT
ACATAAAATGGAGAGCTTAAAAATAGAACCAGAAGAATGTAATGTATCGT
GTCCGCCATTTGGGTGTCCTGAAGAACCTTGTCCAGGACAATTCATGAAT
ACTAAAGTATGCGGTATCATTGACATAAAGGTGTCACAAAATTCATCAAA
ATACTGTTCGGATAAAAATAAAAATTTGTCTTTGATCTCTACGTGTCAAG
TACCATCGACAAAACCAAGATGTGTACAGCCTGAATCTCGAGTTTTACCC
AACACTCAATCTTTGGTTGAAATTTATTATCCGCCAGTTCATACTTTGAA
TAGCTCTTTTATCCAAAATCGTCAACAATATCGTTCAAAGTCTACTCCTT
TGAACTATTTACATCAGCACCATATATTTCAGTCGTCTCATTTAAATTCC
ATAAGCGAGTCGCATAAAAATCAAAATTCTATGCCGCCTACTCTTAAGCA
AAAATCATGCGCACAATCTTGCATAGTTTCTATTCCATTCCGGTAA back to top
Synonyms
The feature 'Cotesia_vestalis012490-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold_7323-augustus-gene-0.7-mRNA-1 |
|